BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0171.0010.p         (179 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240046.1| putative GTP-binding protein (hflX) [Bradyrh...   271   4e-71
ref|YP_001205843.1| putative GTP-binding protein (hflX) [Bradyrh...   270   5e-71
ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas pa...   269   1e-70
ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas pa...   266   1e-69
ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae b...   265   2e-69

>ref|YP_001240046.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. BTAi1]
 gb|ABQ36140.1| GTP-binding protein HflX [Bradyrhizobium sp. BTAi1]
          Length = 459

 Score =  271 bits (692), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 145/176 (82%), Positives = 162/176 (92%), Gaps = 1/176 (0%)

Query: 1   VIVIGPYLRTRRGDGDAQ-TDSSVRDYEARIEEAAGLAGAIDLTVVDSVIAPISQIRPAT 59
           V+V+GPYLR RRGD  AQ + + +RD+EARI+EAAGLA AIDLTV ++++API+QIRPAT
Sbjct: 24  VVVVGPYLRARRGDDGAQASHADMRDFEARIDEAAGLARAIDLTVTEAILAPIAQIRPAT 83

Query: 60  YLGKGKVEEINGLVASNEVELVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAK 119
           YLGKGKV+EI G++A    ELVVMDCALSPIQQRNLEKAW+TKVLDRTGLILEIFGRRAK
Sbjct: 84  YLGKGKVDEIAGVIAGQGAELVVMDCALSPIQQRNLEKAWNTKVLDRTGLILEIFGRRAK 143

Query: 120 TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLISERI 175
           TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLI +RI
Sbjct: 144 TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGDRI 199


>ref|YP_001205843.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
 emb|CAL77618.1| putative GTP-binding protein (hflX) [Bradyrhizobium sp. ORS 278]
          Length = 459

 Score =  270 bits (691), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 148/176 (84%), Positives = 161/176 (91%), Gaps = 1/176 (0%)

Query: 1   VIVIGPYLRTRRGD-GDAQTDSSVRDYEARIEEAAGLAGAIDLTVVDSVIAPISQIRPAT 59
           VIV+GPYLRTRRGD G   + S +RD EARI+EAAGLA AI+LTV +S++A I QIRPAT
Sbjct: 24  VIVVGPYLRTRRGDDGAPASHSEMRDVEARIDEAAGLARAINLTVAESILALIGQIRPAT 83

Query: 60  YLGKGKVEEINGLVASNEVELVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAK 119
           YLGKGKV+EI G++AS E ELVVMDCALSPIQQRNLEKAW+TKVLDRTGLILEIFGRRAK
Sbjct: 84  YLGKGKVDEIAGVIASQEAELVVMDCALSPIQQRNLEKAWNTKVLDRTGLILEIFGRRAK 143

Query: 120 TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLISERI 175
           TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLI +RI
Sbjct: 144 TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGDRI 199


>ref|YP_001991851.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
 gb|ACF01376.1| GTP-binding proten HflX [Rhodopseudomonas palustris TIE-1]
          Length = 455

 Score =  269 bits (687), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 145/175 (82%), Positives = 161/175 (92%), Gaps = 1/175 (0%)

Query: 1   VIVIGPYLRTRRGDGDAQTDSSVRDYEARIEEAAGLAGAIDLTVVDSVIAPISQIRPATY 60
           VIV+GPYLR RRGD DA  D++VRD +AR++EAAGLA AIDL VV++V+ PISQIRPATY
Sbjct: 23  VIVVGPYLRVRRGDPDA-VDTAVRDNDARLDEAAGLARAIDLDVVEAVLTPISQIRPATY 81

Query: 61  LGKGKVEEINGLVASNEVELVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKT 120
           LGKGKVEEI GL+A++  +L+VMDCALSPIQQRNLEKAW+ KVLDRTGLILEIFGRRAKT
Sbjct: 82  LGKGKVEEIVGLIAAHGADLIVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKT 141

Query: 121 KEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLISERI 175
           +EG LQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLI ERI
Sbjct: 142 REGTLQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGERI 196


>ref|YP_004109189.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
 gb|ADU44456.1| GTP-binding proten HflX [Rhodopseudomonas palustris DX-1]
          Length = 456

 Score =  266 bits (680), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/175 (82%), Positives = 161/175 (92%), Gaps = 1/175 (0%)

Query: 1   VIVIGPYLRTRRGDGDAQTDSSVRDYEARIEEAAGLAGAIDLTVVDSVIAPISQIRPATY 60
           VIV+GPYLR RRGD DA  +++VRD +AR++EAAGLA AIDL VV++V+ PISQIRPATY
Sbjct: 24  VIVVGPYLRARRGDPDA-AETAVRDNDARLDEAAGLARAIDLDVVEAVLTPISQIRPATY 82

Query: 61  LGKGKVEEINGLVASNEVELVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAKT 120
           LGKGKVE+I GL+A++  +LVVMDCALSPIQQRNLEKAW+ KVLDRTGLILEIFGRRAKT
Sbjct: 83  LGKGKVEDIVGLIAAHGADLVVMDCALSPIQQRNLEKAWNAKVLDRTGLILEIFGRRAKT 142

Query: 121 KEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLISERI 175
           +EG LQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLI ERI
Sbjct: 143 REGTLQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLIGERI 197


>ref|ZP_08629877.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07246.1| GTP-binding protein HflX [Bradyrhizobiaceae bacterium SG-6C]
          Length = 436

 Score =  265 bits (676), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 143/176 (81%), Positives = 160/176 (90%), Gaps = 1/176 (0%)

Query: 1   VIVIGPYLRTRRGDGDAQTDSS-VRDYEARIEEAAGLAGAIDLTVVDSVIAPISQIRPAT 59
           ++VIGPY R RRGD DA + S  +R+ EAR+EEAAGLA AIDLTV ++VIAP+S IRPAT
Sbjct: 1   MLVIGPYRRVRRGDPDAPSMSHGIRNPEARLEEAAGLARAIDLTVAEAVIAPLSDIRPAT 60

Query: 60  YLGKGKVEEINGLVASNEVELVVMDCALSPIQQRNLEKAWSTKVLDRTGLILEIFGRRAK 119
           YLGKGKVEE+ GL+ +N+V+LVVMDCALSP+QQRNLEK W  KVLDRTGLILEIFGRRAK
Sbjct: 61  YLGKGKVEEMLGLIKANDVDLVVMDCALSPVQQRNLEKEWKAKVLDRTGLILEIFGRRAK 120

Query: 120 TKEGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRLISERI 175
           T+EGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRR+ISERI
Sbjct: 121 TREGALQVELAHLNYQRSRLVRSWTHLERQRGGFGFMGGPGETQIEADRRMISERI 176