BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0171.0008.p         (85 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001236589.1| dihydrolipoamide succinyltransferase [Bradyr...    82   3e-14
ref|YP_001202601.1| dihydrolipoamide succinyltransferase [Bradyr...    81   7e-14
ref|YP_567684.1| dihydrolipoamide succinyltransferase [Rhodopseu...    79   2e-13
ref|YP_004106824.1| 2-oxoglutarate dehydrogenase, E2 subunit, di...    77   6e-13
ref|YP_530084.1| dihydrolipoamide succinyltransferase [Rhodopseu...    77   6e-13

>ref|YP_001236589.1| dihydrolipoamide succinyltransferase [Bradyrhizobium sp. BTAi1]
 gb|ABQ32683.1| 2-oxoglutarate dehydrogenase E2 component [Bradyrhizobium sp.
          BTAi1]
          Length = 411

 Score = 82.0 bits (201), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 41/42 (97%), Positives = 41/42 (97%)

Query: 1  LETDKVTIEVPAPVAGTLGEIIAKDGETVAVGALLGQINDGA 42
          LETDKVTIEVPAP AGTLGEIIAKDGETVAVGALLGQINDGA
Sbjct: 38 LETDKVTIEVPAPSAGTLGEIIAKDGETVAVGALLGQINDGA 79


>ref|YP_001202601.1| dihydrolipoamide succinyltransferase [Bradyrhizobium sp. ORS 278]
 emb|CAL74355.1| Dihydrolipoamide succinyltransferase component of 2-oxoglutarate
          dehydrogenase complex (E2); acid-inducible
          [Bradyrhizobium sp. ORS 278]
          Length = 413

 Score = 80.9 bits (198), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 40/41 (97%), Positives = 40/41 (97%)

Query: 1  LETDKVTIEVPAPVAGTLGEIIAKDGETVAVGALLGQINDG 41
          LETDKVTIEVPAP AGTLGEIIAKDGETVAVGALLGQINDG
Sbjct: 38 LETDKVTIEVPAPSAGTLGEIIAKDGETVAVGALLGQINDG 78


>ref|YP_567684.1| dihydrolipoamide succinyltransferase [Rhodopseudomonas palustris
           BisB5]
 gb|ABE37783.1| 2-oxoglutarate dehydrogenase E2 component [Rhodopseudomonas
           palustris BisB5]
          Length = 433

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 8/85 (9%)

Query: 1   LETDKVTIEVPAPVAGTLGEIIAKDGETVAVGALLGQINDGAAAMXGSRRRLRQRAATGS 60
           LETDKVTIEVPAP AGTLGEIIAKDGETVAVGALLGQI++G  A         + AA  +
Sbjct: 38  LETDKVTIEVPAPSAGTLGEIIAKDGETVAVGALLGQISEGGGAA--------KPAAKDT 89

Query: 61  IKRSTSLRDKNNGGRPRTKSTRHLP 85
            K + ++  +   GRP  K+    P
Sbjct: 90  PKATAAVAPETTTGRPDLKTDTTKP 114


>ref|YP_004106824.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
          succinyltransferase [Rhodopseudomonas palustris DX-1]
 gb|ADU42091.1| 2-oxoglutarate dehydrogenase, E2 subunit, dihydrolipoamide
          succinyltransferase [Rhodopseudomonas palustris DX-1]
          Length = 413

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/41 (92%), Positives = 39/41 (95%)

Query: 1  LETDKVTIEVPAPVAGTLGEIIAKDGETVAVGALLGQINDG 41
          LETDKVTIEVPAP AGTLGEI+AKDGETVAVGALLGQI DG
Sbjct: 38 LETDKVTIEVPAPSAGTLGEIVAKDGETVAVGALLGQITDG 78


>ref|YP_530084.1| dihydrolipoamide succinyltransferase [Rhodopseudomonas palustris
          BisB18]
 gb|ABD85765.1| 2-oxoglutarate dehydrogenase E2 component [Rhodopseudomonas
          palustris BisB18]
          Length = 434

 Score = 77.4 bits (189), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 38/41 (92%), Positives = 39/41 (95%)

Query: 1  LETDKVTIEVPAPVAGTLGEIIAKDGETVAVGALLGQINDG 41
          LETDKVTIEVPAP AGTLGEI+AKDGETVAVGALLGQI DG
Sbjct: 38 LETDKVTIEVPAPSAGTLGEIVAKDGETVAVGALLGQITDG 78