BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0171.0005.p (480 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp|P10576.1|NTRC_BRASR RecName: Full=Nitrogen assimilation regul... 958 0.0 ref|YP_001240042.1| nitrogen metabolism transcriptional regulato... 936 0.0 ref|YP_001205855.1| nitrogen assimilation regulatory protein [Br... 936 0.0 ref|YP_532447.1| nitrogen metabolism transcriptional regulator N... 929 0.0 ref|NP_771128.1| two-component response regulator [Bradyrhizobiu... 924 0.0 >sp|P10576.1|NTRC_BRASR RecName: Full=Nitrogen assimilation regulatory protein pir||B26499 nitrogen assimilation regulatory protein ntrC - Bradyrhizobium sp gb|AAA26239.1| open reading frame B [Bradyrhizobium sp.] Length = 480 Score = 958 bits (2477), Expect = 0.0, Method: Compositional matrix adjust. Identities = 476/480 (99%), Positives = 478/480 (99%) Query: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE Sbjct: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 Query: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELITIVGRALA 120 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIR SERGAYEYLPKPFDLKELITIVGRALA Sbjct: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRPSERGAYEYLPKPFDLKELITIVGRALA 120 Query: 121 EPKERVASPADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 EPKERV+SPADD EFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA Sbjct: 121 EPKERVSSPADDGEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 Query: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE Sbjct: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 Query: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR Sbjct: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 Query: 301 LNVVPLRLPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 LNVVPLR+PPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE Sbjct: 301 LNVVPLRVPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 Query: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG Sbjct: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 Query: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG Sbjct: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 >ref|YP_001240042.1| nitrogen metabolism transcriptional regulator NtrC [Bradyrhizobium sp. BTAi1] gb|ABQ36136.1| nitrogen metabolism transcriptional regulator, NtrC, Fis family [Bradyrhizobium sp. BTAi1] Length = 480 Score = 936 bits (2420), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/480 (96%), Positives = 470/480 (97%) Query: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE Sbjct: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 Query: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELITIVGRALA 120 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELI IVGRALA Sbjct: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELIAIVGRALA 120 Query: 121 EPKERVASPADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 EPKER AS DD+EF+SIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA Sbjct: 121 EPKERAASQPDDNEFESIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 Query: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 LHDYG+RRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE Sbjct: 181 LHDYGKRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 Query: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR Sbjct: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 Query: 301 LNVVPLRLPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 LNVVPLRLPPLRERIEDLPDL+RHFF+LAEKDGLPPKKLDA ALERLKQHRWPGNVRELE Sbjct: 301 LNVVPLRLPPLRERIEDLPDLVRHFFALAEKDGLPPKKLDAAALERLKQHRWPGNVRELE 360 Query: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 NLARRLAALYPQDVITASVIDGELAPPAVT+GS+ +DNLGGAVEAYLSSHF GFPNG Sbjct: 361 NLARRLAALYPQDVITASVIDGELAPPAVTTGSSTPTSIDNLGGAVEAYLSSHFQGFPNG 420 Query: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG Sbjct: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 >ref|YP_001205855.1| nitrogen assimilation regulatory protein [Bradyrhizobium sp. ORS 278] emb|CAL77630.1| Nitrogen assimilation regulatory protein [Bradyrhizobium sp. ORS 278] Length = 480 Score = 936 bits (2418), Expect = 0.0, Method: Compositional matrix adjust. Identities = 462/480 (96%), Positives = 470/480 (97%) Query: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE Sbjct: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 Query: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELITIVGRALA 120 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAI+ASERGAYEYLPKPFDLKELI IVGRALA Sbjct: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIKASERGAYEYLPKPFDLKELIAIVGRALA 120 Query: 121 EPKERVASPADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 EPKER AS DDSEF+SIPLVGRSPAMQ+IYRVLARLMQTDLTVMISGESGTGKELVARA Sbjct: 121 EPKERAASQPDDSEFESIPLVGRSPAMQDIYRVLARLMQTDLTVMISGESGTGKELVARA 180 Query: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 LHDYG+RRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE Sbjct: 181 LHDYGKRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 Query: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR Sbjct: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 Query: 301 LNVVPLRLPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 LNVVPLRLPPLRERIEDLPDL+RHFF+LAEKDGLPPKKLDA ALERLKQHRWPGNVRELE Sbjct: 301 LNVVPLRLPPLRERIEDLPDLVRHFFALAEKDGLPPKKLDAAALERLKQHRWPGNVRELE 360 Query: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 NLARRLAALYPQDVITASVIDGELAPPAVT+GS A +DNLGGAVEAYLSSHF GFPNG Sbjct: 361 NLARRLAALYPQDVITASVIDGELAPPAVTTGSNAPTSIDNLGGAVEAYLSSHFQGFPNG 420 Query: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG Sbjct: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 >ref|YP_532447.1| nitrogen metabolism transcriptional regulator NtrC [Rhodopseudomonas palustris BisB18] gb|ABD88128.1| nitrogen metabolism transcriptional regulator, NtrC, Fis family [Rhodopseudomonas palustris BisB18] Length = 480 Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/480 (95%), Positives = 467/480 (97%) Query: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE Sbjct: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 Query: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELITIVGRALA 120 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELI IVGRALA Sbjct: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELIAIVGRALA 120 Query: 121 EPKERVASPADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 EPK+R AS ADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA Sbjct: 121 EPKDRAASHADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 Query: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 LHDYG+RRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE Sbjct: 181 LHDYGKRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 Query: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR Sbjct: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 Query: 301 LNVVPLRLPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 LNVVPLRLPPLRE IEDLPDL+RHFF+LAEKDGLP KKLDAQALERLKQHRWPGNVRELE Sbjct: 301 LNVVPLRLPPLREHIEDLPDLVRHFFALAEKDGLPAKKLDAQALERLKQHRWPGNVRELE 360 Query: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 NLARRLAALYPQDVIT SVIDGELAPPAV SG + + VDNLGGAVE YLSSHFS FPNG Sbjct: 361 NLARRLAALYPQDVITGSVIDGELAPPAVVSGGSISNTVDNLGGAVETYLSSHFSSFPNG 420 Query: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 VPPPGLYHRIL+EIE+PLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG Sbjct: 421 VPPPGLYHRILREIEVPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 >ref|NP_771128.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC49753.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 480 Score = 924 bits (2387), Expect = 0.0, Method: Compositional matrix adjust. Identities = 453/480 (94%), Positives = 468/480 (97%) Query: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE Sbjct: 1 MPAGSILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQGEGDLVITDVVMPDE 60 Query: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELITIVGRALA 120 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELI IVGRALA Sbjct: 61 NAFDLLPRIKKMRPNLPVIVMSAQNTFMTAIRASERGAYEYLPKPFDLKELIAIVGRALA 120 Query: 121 EPKERVASPADDSEFDSIPLVGRSPAMQEIYRVLARLMQTDLTVMISGESGTGKELVARA 180 EPKER ++P +D+E ++IPLVGRSPAMQEIYRVLARLMQTDLTVMI+GESGTGKELVARA Sbjct: 121 EPKERTSTPDEDAEMEAIPLVGRSPAMQEIYRVLARLMQTDLTVMITGESGTGKELVARA 180 Query: 181 LHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 LHDYG+RRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE Sbjct: 181 LHDYGKRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDE 240 Query: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFR 300 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLR+LIQQGLFREDLFFR Sbjct: 241 IGDMPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRVLIQQGLFREDLFFR 300 Query: 301 LNVVPLRLPPLRERIEDLPDLIRHFFSLAEKDGLPPKKLDAQALERLKQHRWPGNVRELE 360 LNVVPLRLPPLRERIEDLPDL+RHFF+LAEKDGLPPKKLD ALERLKQHRWPGNVRELE Sbjct: 301 LNVVPLRLPPLRERIEDLPDLVRHFFALAEKDGLPPKKLDTLALERLKQHRWPGNVRELE 360 Query: 361 NLARRLAALYPQDVITASVIDGELAPPAVTSGSTATVGVDNLGGAVEAYLSSHFSGFPNG 420 NLARRLAALYPQDVITASVIDGELAPP+V+ G+ GVDNLGGAVEAYLSSHF GFPNG Sbjct: 361 NLARRLAALYPQDVITASVIDGELAPPSVSPGAAVQQGVDNLGGAVEAYLSSHFQGFPNG 420 Query: 421 VPPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480 VPPPGLYHRILKEIE+PLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG Sbjct: 421 VPPPGLYHRILKEIEVPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDLDIQVYRSGG 480