BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0170.0004.p (275 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766658.1| transposase [Bradyrhizobium japonicum USDA 110]... 565 e-159 ref|NP_768248.1| transposase [Bradyrhizobium japonicum USDA 110]... 560 e-158 ref|ZP_08074610.1| Integrase catalytic region [Methylocystis sp.... 482 e-134 ref|ZP_01550739.1| putative transposase protein [Stappia aggrega... 436 e-120 ref|YP_665992.1| integrase catalytic subunit [Mesorhizobium sp. ... 434 e-120 >ref|NP_766658.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_768374.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_768756.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_774876.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_774901.1| transposase [Bradyrhizobium japonicum USDA 110] gb|AAG60719.1|AF322012_24 ID49 [Bradyrhizobium japonicum] dbj|BAC45283.1| blr0018 [Bradyrhizobium japonicum USDA 110] dbj|BAC46999.1| blr1734 [Bradyrhizobium japonicum USDA 110] dbj|BAC47381.1| bll2116 [Bradyrhizobium japonicum USDA 110] dbj|BAC53501.1| blr8236 [Bradyrhizobium japonicum USDA 110] dbj|BAC53526.1| blr8261 [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 565 bits (1455), Expect = e-159, Method: Compositional matrix adjust. Identities = 275/275 (100%), Positives = 275/275 (100%) Query: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL Sbjct: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 Query: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD Sbjct: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 Query: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG Sbjct: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 Query: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI Sbjct: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 Query: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA Sbjct: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 >ref|NP_768248.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_768563.1| transposase [Bradyrhizobium japonicum USDA 110] ref|NP_774230.1| transposase [Bradyrhizobium japonicum USDA 110] gb|AAG60900.1|AF322013_19 ID472 [Bradyrhizobium japonicum] dbj|BAC46873.1| bll1608 [Bradyrhizobium japonicum USDA 110] dbj|BAC47188.1| blr1923 [Bradyrhizobium japonicum USDA 110] dbj|BAC52855.1| bll7590 [Bradyrhizobium japonicum USDA 110] Length = 275 Score = 560 bits (1444), Expect = e-158, Method: Compositional matrix adjust. Identities = 273/275 (99%), Positives = 274/275 (99%) Query: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL Sbjct: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 Query: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD Sbjct: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 Query: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCV+AVQEALAKHGRP IFNTDQG Sbjct: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVEAVQEALAKHGRPAIFNTDQG 180 Query: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI Sbjct: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 Query: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA Sbjct: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 >ref|ZP_08074610.1| Integrase catalytic region [Methylocystis sp. ATCC 49242] gb|EFX97740.1| Integrase catalytic region [Methylocystis sp. ATCC 49242] Length = 275 Score = 482 bits (1240), Expect = e-134, Method: Compositional matrix adjust. Identities = 226/275 (82%), Positives = 250/275 (90%) Query: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 MIDR HDL I RQAK L +ARS+VYY+PRPVSAEDL LMRR+DELHL++PFAGARMLR L Sbjct: 1 MIDRDHDLPIARQAKALGVARSSVYYKPRPVSAEDLKLMRRIDELHLEHPFAGARMLRDL 60 Query: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 LRREGV GRRH+ TLMKRMGIEA+YRRPNTSKPAPGHK+YPYLLRG+KIERP+ WA D Sbjct: 61 LRREGVAVGRRHVTTLMKRMGIEAIYRRPNTSKPAPGHKVYPYLLRGVKIERPNQVWATD 120 Query: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 I+YIPMRRGFVYL AVVDVF+RRVL+HRVSITMEA CV A++EALAKH +PEIFNTDQG Sbjct: 121 ISYIPMRRGFVYLVAVVDVFTRRVLSHRVSITMEAEICVDALKEALAKHDKPEIFNTDQG 180 Query: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 SQFTSL+FT VL+DAK++ISMDGKGAWRDNVFVERLWR+VKYEEVYLRAYDSVSEARASI Sbjct: 181 SQFTSLDFTGVLIDAKVSISMDGKGAWRDNVFVERLWRSVKYEEVYLRAYDSVSEARASI 240 Query: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 +YLAFYN+ RPHSSLDGRTPDEAYFG Q MAA Sbjct: 241 GRYLAFYNERRPHSSLDGRTPDEAYFGQQKTAMAA 275 >ref|ZP_01550739.1| putative transposase protein [Stappia aggregata IAM 12614] gb|EAV40690.1| putative transposase protein [Stappia aggregata IAM 12614] Length = 276 Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust. Identities = 204/275 (74%), Positives = 237/275 (86%) Query: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 MIDR H LS+VRQAK+L +R +VYY PRPVS DLALMRR+DELHLDYPFAG+RML+ L Sbjct: 1 MIDRAHKLSVVRQAKLLGFSRGSVYYSPRPVSDGDLALMRRIDELHLDYPFAGSRMLQGL 60 Query: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 L+ EG+ GR H+ATLMK+MGIEA+YRRPNTSKPAPGHKIYPYLLR L + RP+ WAMD Sbjct: 61 LKGEGLSVGRLHVATLMKKMGIEAIYRRPNTSKPAPGHKIYPYLLRKLAVTRPNQVWAMD 120 Query: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 +TYIPM RGFVYL AVVD FSRRVL+ R+SITMEAAFC++AV+EALA++G+PEIFNTDQG Sbjct: 121 LTYIPMARGFVYLCAVVDWFSRRVLSWRLSITMEAAFCIEAVEEALARYGKPEIFNTDQG 180 Query: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 SQFTS++FT VL A+IAISMDGKGAWRDNVFVERLWR++KYEEVYL AY +VSEARA I Sbjct: 181 SQFTSIDFTAVLKKAEIAISMDGKGAWRDNVFVERLWRSIKYEEVYLHAYKTVSEARAGI 240 Query: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 +YL FYN RPHSSLD +TPD+AYF +MAA Sbjct: 241 GRYLTFYNTRRPHSSLDRQTPDQAYFNALTPMMAA 275 >ref|YP_665992.1| integrase catalytic subunit [Mesorhizobium sp. BNC1] gb|ABG61345.1| Integrase, catalytic region [Chelativorans sp. BNC1] Length = 276 Score = 434 bits (1117), Expect = e-120, Method: Compositional matrix adjust. Identities = 205/275 (74%), Positives = 236/275 (85%) Query: 1 MIDRGHDLSIVRQAKVLKLARSTVYYEPRPVSAEDLALMRRLDELHLDYPFAGARMLRSL 60 MIDR H LS+VRQAK+L +R +VYY PRPVS DLALMRR+DELHLDYPFAG+RML+ L Sbjct: 1 MIDREHKLSVVRQAKLLGFSRGSVYYLPRPVSDGDLALMRRIDELHLDYPFAGSRMLQGL 60 Query: 61 LRREGVYAGRRHIATLMKRMGIEAVYRRPNTSKPAPGHKIYPYLLRGLKIERPDHAWAMD 120 LR EG+ GRRH+ATLMK+MGIEA+YRRPNTSKPAPGHKIYPYLLR L + RP+ WAMD Sbjct: 61 LRGEGLETGRRHVATLMKKMGIEAIYRRPNTSKPAPGHKIYPYLLRKLAVTRPNQVWAMD 120 Query: 121 ITYIPMRRGFVYLAAVVDVFSRRVLAHRVSITMEAAFCVQAVQEALAKHGRPEIFNTDQG 180 +TYIPM RGFVYL AVVD FSR+VL+ R+SITMEAAFC++AV+EALA+HGRPEIFNTDQG Sbjct: 121 LTYIPMARGFVYLCAVVDWFSRKVLSWRLSITMEAAFCIEAVEEALARHGRPEIFNTDQG 180 Query: 181 SQFTSLEFTDVLLDAKIAISMDGKGAWRDNVFVERLWRTVKYEEVYLRAYDSVSEARASI 240 SQFTS++FT VL ++IAISMDGKGAWRDNVFVERLWR++KYEEVYL A +VSEARA I Sbjct: 181 SQFTSIDFTAVLKRSQIAISMDGKGAWRDNVFVERLWRSIKYEEVYLHADKTVSEARAGI 240 Query: 241 AKYLAFYNQGRPHSSLDGRTPDEAYFGTQAMVMAA 275 +YL FYN RPHSSLD RTPD+AYF +M A Sbjct: 241 GRYLNFYNTRRPHSSLDRRTPDQAYFNALTPMMVA 275