BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0169.0001.p         (151 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001239112.1| formate dehydrogenase accessory protein [Bra...   162   1e-38
ref|YP_001206896.1| formate dehydrogenase accessory protein [Bra...   159   1e-37
ref|ZP_06889172.1| formate dehydrogenase family accessory protei...   155   2e-36
ref|YP_783546.1| formate dehydrogenase accessory protein [Rhodop...   154   3e-36
ref|NP_355556.2| formate dehydrogenase accessory protein [Agroba...   154   6e-36

>ref|YP_001239112.1| formate dehydrogenase accessory protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ35206.1| formate dehydrogenase formation protein, subunit FdhD
           [Bradyrhizobium sp. BTAi1]
          Length = 278

 Score =  162 bits (411), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 87/146 (59%), Positives = 111/146 (76%), Gaps = 1/146 (0%)

Query: 5   ADAARPAAHLTRSIIRA-RQVESALLALSDAQTLNRATRATHAAGFFHPDQELVAIREDV 63
           A+A RPAAH+      A R V +AL A+   Q LN  TRA HAA F+ P + +V++REDV
Sbjct: 114 AEAVRPAAHVAAGRRFAPRDVMAALAAIEPLQKLNHETRAVHAAAFWTPARGIVSLREDV 173

Query: 64  GRHNALDKLAGALAANNVSATEGAIVLTSRVSIELVQKAAAISCPMLVAMSAPTALAVRA 123
           GRHNALDKLAG LA +  +A+EG +++TSRVS+ELVQKAAA+  P+LVA+SAPTALA+R 
Sbjct: 174 GRHNALDKLAGHLAQSRCAASEGLVIMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRM 233

Query: 124 AQACGITLIAVARGSAFEVFSHPDAI 149
           A+A GITLIAVAR   FE+F+HP+ I
Sbjct: 234 AEAAGITLIAVARNDGFEIFTHPERI 259


>ref|YP_001206896.1| formate dehydrogenase accessory protein [Bradyrhizobium sp. ORS
           278]
 emb|CAL78679.1| formate dehydrogenase formation protein, subunit FdhD
           [Bradyrhizobium sp. ORS 278]
          Length = 278

 Score =  159 bits (403), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/146 (58%), Positives = 109/146 (74%), Gaps = 1/146 (0%)

Query: 5   ADAARPAAHLTRSIIRA-RQVESALLALSDAQTLNRATRATHAAGFFHPDQELVAIREDV 63
           A+A RPAAH+      A R + +AL A+   Q LN  TRA HAA F+ P + +V++REDV
Sbjct: 114 AEAVRPAAHVPAGRRFAPRDIMAALAAIEPLQKLNHETRAVHAAAFWTPARGIVSLREDV 173

Query: 64  GRHNALDKLAGALAANNVSATEGAIVLTSRVSIELVQKAAAISCPMLVAMSAPTALAVRA 123
           GRHNALDKLAG LA    +A+EG +++TSRVS+ELVQKAAA+  P+LVA+SAPTALA+R 
Sbjct: 174 GRHNALDKLAGHLAQTGSAASEGLVMMTSRVSVELVQKAAAMGAPVLVAVSAPTALAIRM 233

Query: 124 AQACGITLIAVARGSAFEVFSHPDAI 149
           A+A GITLIAVAR   FE+F+HP  I
Sbjct: 234 AEAAGITLIAVARNDGFEIFTHPHRI 259


>ref|ZP_06889172.1| formate dehydrogenase family accessory protein FdhD [Methylosinus
           trichosporium OB3b]
 gb|EFH02303.1| formate dehydrogenase family accessory protein FdhD [Methylosinus
           trichosporium OB3b]
          Length = 276

 Score =  155 bits (393), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 75/119 (63%), Positives = 93/119 (78%)

Query: 31  LSDAQTLNRATRATHAAGFFHPDQELVAIREDVGRHNALDKLAGALAANNVSATEGAIVL 90
           L  AQ LNR TRA HAA F+ P  + + +REDVGRHNALDKLAGALA   VSA +G +++
Sbjct: 149 LPGAQPLNRETRAVHAAAFWAPGDDALIVREDVGRHNALDKLAGALARQGVSAAQGVVLM 208

Query: 91  TSRVSIELVQKAAAISCPMLVAMSAPTALAVRAAQACGITLIAVARGSAFEVFSHPDAI 149
           TSRVS+ELVQKAA I  P++ A+SAPTALAVR A+ CG+TL+AV RG  FE+F+HP+ I
Sbjct: 209 TSRVSVELVQKAARIGAPVIAAVSAPTALAVRTAEKCGVTLVAVVRGRDFEIFTHPERI 267


>ref|YP_783546.1| formate dehydrogenase accessory protein [Rhodopseudomonas palustris
           BisA53]
 gb|ABJ08566.1| formate dehydrogenase family accessory protein FdhD
           [Rhodopseudomonas palustris BisA53]
          Length = 272

 Score =  154 bits (390), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 82/143 (57%), Positives = 109/143 (76%), Gaps = 1/143 (0%)

Query: 5   ADAARPAAHLTRSIIRA-RQVESALLALSDAQTLNRATRATHAAGFFHPDQELVAIREDV 63
           A+A RPAA ++     A  Q+ +A+ AL   Q LN  TRA HAA F++P + +VA+REDV
Sbjct: 118 AEALRPAAIVSSDARFAPSQIMAAMQALPPLQQLNTETRAVHAAAFWNPSRGIVALREDV 177

Query: 64  GRHNALDKLAGALAANNVSATEGAIVLTSRVSIELVQKAAAISCPMLVAMSAPTALAVRA 123
           GRHNALDKLAGALA ++ SA +G ++LTSRVS+E+VQK A++  P+LV++SAPTALA+R 
Sbjct: 178 GRHNALDKLAGALARDHHSAADGMVLLTSRVSVEMVQKTASLGAPLLVSVSAPTALAIRM 237

Query: 124 AQACGITLIAVARGSAFEVFSHP 146
           A+A GITL A+AR   FEVF+HP
Sbjct: 238 AEAAGITLAAIARADGFEVFTHP 260


>ref|NP_355556.2| formate dehydrogenase accessory protein [Agrobacterium tumefaciens
           str. C58]
 sp|Q8UC79.2|FDHD_AGRT5 RecName: Full=Protein FdhD homolog
 gb|AAK88341.2| NAD-dependent formate dehydrogenase, C subunit protein
           [Agrobacterium tumefaciens str. C58]
          Length = 271

 Score =  154 bits (388), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 100/140 (71%)

Query: 10  PAAHLTRSIIRARQVESALLALSDAQTLNRATRATHAAGFFHPDQELVAIREDVGRHNAL 69
           P     +S +    + +A+ AL+DAQTLNR TRA H AGF++P + L+A+REDVGRHNAL
Sbjct: 130 PDLSSVKSSVHGNDIVAAVKALNDAQTLNRETRAVHGAGFYNPREGLLAVREDVGRHNAL 189

Query: 70  DKLAGALAANNVSATEGAIVLTSRVSIELVQKAAAISCPMLVAMSAPTALAVRAAQACGI 129
           DKLAGA+    +SA  G + +TSR+S+E+VQK A + CP+L A+SAPTALA+  A   GI
Sbjct: 190 DKLAGAVVNAGISAQMGIVAVTSRLSVEMVQKTAILGCPVLAAISAPTALAIETADRAGI 249

Query: 130 TLIAVARGSAFEVFSHPDAI 149
           TL+A+ RG  FE+F+  D I
Sbjct: 250 TLVALVRGEDFEIFTRADRI 269