BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0038.p         (91 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD89488.1| SSU ribosomal protein S21P [Rhodopseudomonas palu...   143   7e-33
ref|YP_001203348.1| 30S ribosomal protein S21 [Bradyrhizobium sp...   142   1e-32
ref|YP_533807.2| 30S ribosomal protein S21 [Rhodopseudomonas pal...   141   3e-32
ref|YP_782997.1| 30S ribosomal protein S21 [Rhodopseudomonas pal...   141   3e-32
ref|ZP_07025241.1| ribosomal protein S21 [Afipia sp. 1NLS2] >gi|...   140   5e-32

>gb|ABD89488.1| SSU ribosomal protein S21P [Rhodopseudomonas palustris BisB18]
          Length = 121

 Score =  143 bits (361), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 75/84 (89%), Positives = 77/84 (91%)

Query: 1   VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
           VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK
Sbjct: 22  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 81

Query: 61  KLQREGLLPMKPKXRRWSRPSLNR 84
           KLQREGLLPMKPK    + P  +R
Sbjct: 82  KLQREGLLPMKPKPVFGAGPGGDR 105


>ref|YP_001203348.1| 30S ribosomal protein S21 [Bradyrhizobium sp. ORS 278]
 emb|CAL75111.1| 30S ribosomal protein S21 [Bradyrhizobium sp. ORS 278]
          Length = 100

 Score =  142 bits (359), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/87 (86%), Positives = 78/87 (89%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK
Sbjct: 1  MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60

Query: 61 KLQREGLLPMKPKXRRWSRPSLNRFAD 87
          KLQREGLLPMKPK    + P  +R A 
Sbjct: 61 KLQREGLLPMKPKPVFGAGPGGDRGAG 87


>ref|YP_533807.2| 30S ribosomal protein S21 [Rhodopseudomonas palustris BisB18]
 sp|Q20ZE8.2|RS21_RHOPB RecName: Full=30S ribosomal protein S21
          Length = 100

 Score =  141 bits (356), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/84 (88%), Positives = 77/84 (91%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK
Sbjct: 1  MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60

Query: 61 KLQREGLLPMKPKXRRWSRPSLNR 84
          KLQREGLLPMKPK    + P  +R
Sbjct: 61 KLQREGLLPMKPKPVFGAGPGGDR 84


>ref|YP_782997.1| 30S ribosomal protein S21 [Rhodopseudomonas palustris BisA53]
 sp|Q07J67.1|RS21_RHOP5 RecName: Full=30S ribosomal protein S21
 gb|ABJ08017.1| SSU ribosomal protein S21P [Rhodopseudomonas palustris BisA53]
          Length = 99

 Score =  141 bits (355), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 74/84 (88%), Positives = 77/84 (91%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK
Sbjct: 1  MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60

Query: 61 KLQREGLLPMKPKXRRWSRPSLNR 84
          KLQREGLLPMKPK    + P  +R
Sbjct: 61 KLQREGLLPMKPKPVFGAGPGGDR 84


>ref|ZP_07025241.1| ribosomal protein S21 [Afipia sp. 1NLS2]
 gb|EFI52383.1| ribosomal protein S21 [Afipia sp. 1NLS2]
          Length = 99

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 72/73 (98%), Positives = 73/73 (100%)

Query: 1  VQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60
          +QVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK
Sbjct: 1  MQVLVRDNNVDQALKALKKKMQREGIFREMKLRGHYEKPSEKKAREKAEAVRRARKLARK 60

Query: 61 KLQREGLLPMKPK 73
          KLQREGLLPMKPK
Sbjct: 61 KLQREGLLPMKPK 73