BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0035.p (260 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773702.1| methyl accepting chemotaxis protein [Bradyrhizo... 307 9e-82 ref|YP_001237949.1| methyl-accepting chemotaxis sensory transduc... 303 1e-80 ref|YP_001207817.1| putative methyl-accepting chemotaxis sensory... 301 6e-80 ref|YP_533949.1| methyl-accepting chemotaxis sensory transducer ... 275 4e-72 ref|YP_571026.1| chemotaxis sensory transducer [Rhodopseudomonas... 272 3e-71 >ref|NP_773702.1| methyl accepting chemotaxis protein [Bradyrhizobium japonicum USDA 110] dbj|BAC52327.1| bll7062 [Bradyrhizobium japonicum USDA 110] Length = 561 Score = 307 bits (787), Expect = 9e-82, Method: Compositional matrix adjust. Identities = 161/191 (84%), Positives = 175/191 (91%) Query: 1 MRDIADGKLDGDIPGVGRGDXVGAMAATVQVFKDNAVRIRGLEQAEAETKARAEAERRGA 60 M D+ADGKL+GDIPGVGRGD VGAMA+TVQ+FKDNAVRIR LE+ EA+ K RA A+RR A Sbjct: 224 MEDLADGKLEGDIPGVGRGDEVGAMASTVQIFKDNAVRIRDLEKTEADAKERAAADRRSA 283 Query: 61 MENIANDFERSVNGIVRTVASAAAGMQTTAQSMTATASDASARAATVGAASDSASNNVGT 120 ME IANDFERSVNGIVR+V+SAAAGMQ+TAQSMTATAS+AS+RAATVGAAS AS NVGT Sbjct: 284 MEEIANDFERSVNGIVRSVSSAAAGMQSTAQSMTATASNASSRAATVGAASQKASGNVGT 343 Query: 121 VAAAAEELSSSVAEISRQVARSSEVASQAVADAERTNATVQALSTGAEKIGEVVKLIHSI 180 VAAAAEELSSSVAEISRQV RS+EVAS+AV DAERTNATVQ LSTGAEKIGEVVKLIHSI Sbjct: 344 VAAAAEELSSSVAEISRQVTRSTEVASRAVNDAERTNATVQELSTGAEKIGEVVKLIHSI 403 Query: 181 AAQTNLLALCA 191 AAQTNLLAL A Sbjct: 404 AAQTNLLALNA 414 >ref|YP_001237949.1| methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp. BTAi1] gb|ABQ34043.1| methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp. BTAi1] Length = 561 Score = 303 bits (777), Expect = 1e-80, Method: Compositional matrix adjust. Identities = 159/191 (83%), Positives = 177/191 (92%) Query: 1 MRDIADGKLDGDIPGVGRGDXVGAMAATVQVFKDNAVRIRGLEQAEAETKARAEAERRGA 60 MR+IADG+L+G+IPGVGRGD +G+MAATVQ+FKDNA+R+R LEQAEA T+ RA AERR A Sbjct: 224 MREIADGRLEGEIPGVGRGDEIGSMAATVQIFKDNALRMRELEQAEAATQQRALAERRSA 283 Query: 61 MENIANDFERSVNGIVRTVASAAAGMQTTAQSMTATASDASARAATVGAASDSASNNVGT 120 MEN+A DFERSVNGIVR+VASAA GMQ TAQSMT+TASDASARA+TV AA+ SA++NVGT Sbjct: 284 MENLAADFERSVNGIVRSVASAAEGMQHTAQSMTSTASDASARASTVSAATQSANDNVGT 343 Query: 121 VAAAAEELSSSVAEISRQVARSSEVASQAVADAERTNATVQALSTGAEKIGEVVKLIHSI 180 VAAAAEELSSSVAEISRQVARSSEVASQAV DAERTNATVQ LS+GAEKIGEVVKLIHSI Sbjct: 344 VAAAAEELSSSVAEISRQVARSSEVASQAVNDAERTNATVQVLSSGAEKIGEVVKLIHSI 403 Query: 181 AAQTNLLALCA 191 AAQTNLLAL A Sbjct: 404 AAQTNLLALNA 414 >ref|YP_001207817.1| putative methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp. ORS 278] emb|CAL79602.1| putative methyl-accepting chemotaxis sensory transducer [Bradyrhizobium sp. ORS 278] Length = 561 Score = 301 bits (771), Expect = 6e-80, Method: Compositional matrix adjust. Identities = 154/191 (80%), Positives = 176/191 (92%) Query: 1 MRDIADGKLDGDIPGVGRGDXVGAMAATVQVFKDNAVRIRGLEQAEAETKARAEAERRGA 60 MRDIADG+L+G+IPGVGRGD +G MAATVQ+FKDNA+R+R LEQAEA K RAEAERR A Sbjct: 224 MRDIADGQLEGEIPGVGRGDEIGGMAATVQIFKDNALRVRELEQAEAANKQRAEAERRAA 283 Query: 61 MENIANDFERSVNGIVRTVASAAAGMQTTAQSMTATASDASARAATVGAASDSASNNVGT 120 M+N+A DFERSVNGIVR+VASAA GMQ TA+SMT+TASDAS+RA+TV AA+ SA++NVGT Sbjct: 284 MQNLAADFERSVNGIVRSVASAAEGMQHTAESMTSTASDASSRASTVSAATQSANDNVGT 343 Query: 121 VAAAAEELSSSVAEISRQVARSSEVASQAVADAERTNATVQALSTGAEKIGEVVKLIHSI 180 VA+AAE+LSSSV+EISRQVARSSEVAS+AV DAERTNATVQ LS+GAEKIGEVVKLIHSI Sbjct: 344 VASAAEQLSSSVSEISRQVARSSEVASKAVGDAERTNATVQVLSSGAEKIGEVVKLIHSI 403 Query: 181 AAQTNLLALCA 191 AAQTNLLAL A Sbjct: 404 AAQTNLLALNA 414 >ref|YP_533949.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas palustris BisB18] gb|ABD89630.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas palustris BisB18] Length = 586 Score = 275 bits (704), Expect = 4e-72, Method: Compositional matrix adjust. Identities = 141/191 (73%), Positives = 169/191 (88%) Query: 1 MRDIADGKLDGDIPGVGRGDXVGAMAATVQVFKDNAVRIRGLEQAEAETKARAEAERRGA 60 MR +ADG+LD DIPG+ RGD VG MAATVQVFKDNA+RIRGLEQ EAE + R A RR Sbjct: 249 MRSLADGRLDDDIPGIARGDEVGKMAATVQVFKDNAIRIRGLEQVEAEAQQRVAAARRAE 308 Query: 61 MENIANDFERSVNGIVRTVASAAAGMQTTAQSMTATASDASARAATVGAASDSASNNVGT 120 ME++A+DFERSV+GIVR+V++AA GMQ+TAQSMTATA+DAS+RAATVGAAS++AS NVGT Sbjct: 309 MESLADDFERSVSGIVRSVSAAAQGMQSTAQSMTATATDASSRAATVGAASENASTNVGT 368 Query: 121 VAAAAEELSSSVAEISRQVARSSEVASQAVADAERTNATVQALSTGAEKIGEVVKLIHSI 180 VA+AAEELS+SV EI+RQV++S E+AS+AV DAE+TN TV+ LS GAEKIGEVV+LIHSI Sbjct: 369 VASAAEELSASVTEIARQVSQSREIASRAVGDAEQTNETVKLLSIGAEKIGEVVQLIHSI 428 Query: 181 AAQTNLLALCA 191 A+QTNLLAL A Sbjct: 429 ASQTNLLALNA 439 >ref|YP_571026.1| chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5] gb|ABE41125.1| methyl-accepting chemotaxis sensory transducer [Rhodopseudomonas palustris BisB5] Length = 566 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 145/191 (75%), Positives = 164/191 (85%) Query: 1 MRDIADGKLDGDIPGVGRGDXVGAMAATVQVFKDNAVRIRGLEQAEAETKARAEAERRGA 60 M+ +A+G+LD DIPG RGD VGAMA +VQVFKDNA+RIRGLEQ EAET+ RA ERR Sbjct: 229 MQSLAEGQLDADIPGTDRGDEVGAMAKSVQVFKDNAIRIRGLEQIEAETQQRAAEERRRT 288 Query: 61 MENIANDFERSVNGIVRTVASAAAGMQTTAQSMTATASDASARAATVGAASDSASNNVGT 120 M IA DFERSV+GIV +VA+AA MQ+TAQSMTATASDASARAATVG+AS S S +GT Sbjct: 289 MLEIAGDFERSVSGIVGSVATAARNMQSTAQSMTATASDASARAATVGSASQSTSTTIGT 348 Query: 121 VAAAAEELSSSVAEISRQVARSSEVASQAVADAERTNATVQALSTGAEKIGEVVKLIHSI 180 VAAAAEELSSSV EI+RQVA+S EVAS+AV DAE+TNATVQ LSTGAEKIGEVV+LIHSI Sbjct: 349 VAAAAEELSSSVGEIARQVAQSREVASKAVIDAEQTNATVQLLSTGAEKIGEVVQLIHSI 408 Query: 181 AAQTNLLALCA 191 A+QTNLLAL A Sbjct: 409 ASQTNLLALNA 419