BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0030.p (298 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773706.1| ABC transporter permease [Bradyrhizobium japoni... 548 e-154 ref|YP_002824223.1| sugar ABC transporter permease [Sinorhizobiu... 416 e-114 ref|NP_437905.1| sugar uptake ABC transporter permease [Sinorhiz... 415 e-114 ref|YP_001313068.1| binding-protein-dependent transport systems ... 415 e-114 ref|YP_004556936.1| ABC transporter integral membrane subunit [S... 415 e-114 >ref|NP_773706.1| ABC transporter permease [Bradyrhizobium japonicum USDA 110] dbj|BAC52331.1| blr7066 [Bradyrhizobium japonicum USDA 110] Length = 298 Score = 548 bits (1411), Expect = e-154, Method: Compositional matrix adjust. Identities = 272/298 (91%), Positives = 283/298 (94%) Query: 1 MTDVAAQSSNVASATPDTMAWDSRARRVVMIYLPLACFILILLFPFYWMAVTSFKPNAEL 60 MTD AQ++ A PDTMAWDS RR++MIYLPL CF+LILLFPFYWMA+TSFKPNAEL Sbjct: 1 MTDTVAQATPDTKAAPDTMAWDSGLRRLMMIYLPLGCFVLILLFPFYWMAITSFKPNAEL 60 Query: 61 LNYKEHNPFWITSPTLAHIKHLLFDTAYPRWLKTTMLVAIGSTFLSLFASTLAAYAIERL 120 +NYK HNPFWI+SPTLAHIKHLLFDTAYPRWL TTMLVAIGST LSL ASTLAAYAIERL Sbjct: 61 MNYKAHNPFWISSPTLAHIKHLLFDTAYPRWLWTTMLVAIGSTTLSLIASTLAAYAIERL 120 Query: 121 RFRGSPYVGLGIYLAYLVPPSILFIPLATVIVQFGLFDSPLALILVYPTFLVPFCTWLLI 180 RFRGSPYVGLGIYLAYLVPPSILFIPLATV+VQFGLFDSP+ALILVYPTFLVPFCTWLLI Sbjct: 121 RFRGSPYVGLGIYLAYLVPPSILFIPLATVVVQFGLFDSPMALILVYPTFLVPFCTWLLI 180 Query: 181 GYFKSIPYELEECALVDGATRLQILWRITLPLAVPGLISAGIFSFTLSWNEFIYALAFIQ 240 GYFKSIPYELEECALVDGATRLQIL RITLPLAVPGLISAGIFSFTLSWNEFIYALAFIQ Sbjct: 181 GYFKSIPYELEECALVDGATRLQILRRITLPLAVPGLISAGIFSFTLSWNEFIYALAFIQ 240 Query: 241 SGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVALFYSLFVDYYVSSLTGAVKE 298 SGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVA+FYSLFVDYYVSSLTGAVKE Sbjct: 241 SGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVAIFYSLFVDYYVSSLTGAVKE 298 >ref|YP_002824223.1| sugar ABC transporter permease [Sinorhizobium fredii NGR234] gb|ACP23470.1| probable sugar ABC transporter, permease protein [Sinorhizobium fredii NGR234] Length = 299 Score = 416 bits (1068), Expect = e-114, Method: Compositional matrix adjust. Identities = 204/299 (68%), Positives = 244/299 (81%), Gaps = 1/299 (0%) Query: 1 MTDVAAQSSNVASATPDTMAWDSR-ARRVVMIYLPLACFILILLFPFYWMAVTSFKPNAE 59 M V + T + M++ +R RR+V +YLP+A F+ +LLFPFYWMA+T+ KPN++ Sbjct: 1 MNTTTKIEDEVLTDTAEGMSYLNRLPRRIVTLYLPMAVFVFVLLFPFYWMAITAVKPNSQ 60 Query: 60 LLNYKEHNPFWITSPTLAHIKHLLFDTAYPRWLKTTMLVAIGSTFLSLFASTLAAYAIER 119 L +Y ++PFW+ PTL HIK+LLF+T+YP WL TMLVA+GST LSL AS AAYAIER Sbjct: 61 LTDYNNYSPFWVVGPTLDHIKYLLFETSYPGWLWNTMLVALGSTILSLAASIFAAYAIER 120 Query: 120 LRFRGSPYVGLGIYLAYLVPPSILFIPLATVIVQFGLFDSPLALILVYPTFLVPFCTWLL 179 +RF GS VGL I+LAYLVPPSILFIPLA ++ +FG++DS LALI YPTFL+PFCTWLL Sbjct: 121 VRFTGSRPVGLMIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLL 180 Query: 180 IGYFKSIPYELEECALVDGATRLQILWRITLPLAVPGLISAGIFSFTLSWNEFIYALAFI 239 +GYF+SIP+ELEE ALVDGATR QIL RI LPLAVPGLISAGIF+FTLSWNEFIYAL FI Sbjct: 181 MGYFRSIPFELEESALVDGATRWQILIRIILPLAVPGLISAGIFAFTLSWNEFIYALTFI 240 Query: 240 QSGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVALFYSLFVDYYVSSLTGAVKE 298 QS NKTVPV +LTELV GDV++WGALMAG+L GSLPV + YS FVDYYVSS+TGAVKE Sbjct: 241 QSSENKTVPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE 299 >ref|NP_437905.1| sugar uptake ABC transporter permease [Sinorhizobium meliloti 1021] emb|CAC49765.1| putative sugar uptake ABC transporter permease protein [Sinorhizobium meliloti 1021] gb|AEG09130.1| ABC-type transporter, integral membrane subunit [Sinorhizobium meliloti BL225C] gb|AEH83086.1| putative sugar uptake ABC transporter permease protein [Sinorhizobium meliloti SM11] Length = 299 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 203/299 (67%), Positives = 245/299 (81%), Gaps = 1/299 (0%) Query: 1 MTDVAAQSSNVASATPDTMAWDSR-ARRVVMIYLPLACFILILLFPFYWMAVTSFKPNAE 59 M V + T + M++ +R RR+V++YLP+A F+ +LLFPFYWMA+T+ KPNA+ Sbjct: 1 MNTTTRTDDEVLTDTAEGMSYLNRLPRRIVVLYLPMAVFVFVLLFPFYWMAITAVKPNAQ 60 Query: 60 LLNYKEHNPFWITSPTLAHIKHLLFDTAYPRWLKTTMLVAIGSTFLSLFASTLAAYAIER 119 L +Y ++PFW+ PTL HIK+LLF+T+YP WL TMLVA+GST LSL AS AAYAIER Sbjct: 61 LTDYNNYSPFWVVRPTLDHIKYLLFETSYPGWLWNTMLVAVGSTILSLAASVFAAYAIER 120 Query: 120 LRFRGSPYVGLGIYLAYLVPPSILFIPLATVIVQFGLFDSPLALILVYPTFLVPFCTWLL 179 +RF G+ VGL I+LAYLVPPSILFIPLA ++ +FG++DS LALI YPTFL+PFCTWLL Sbjct: 121 VRFTGARPVGLLIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLL 180 Query: 180 IGYFKSIPYELEECALVDGATRLQILWRITLPLAVPGLISAGIFSFTLSWNEFIYALAFI 239 +GYF+SIP+ELEE ALVDGATR QIL +I LPLAVPGLISAGIF+FTLSWNEFIYAL FI Sbjct: 181 MGYFRSIPFELEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI 240 Query: 240 QSGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVALFYSLFVDYYVSSLTGAVKE 298 QS NKTVPV +LTELV GDV++WGALMAG+L GSLPV + YS FVDYYVSS+TGAVKE Sbjct: 241 QSSENKTVPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE 299 >ref|YP_001313068.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] gb|ABR63135.1| binding-protein-dependent transport systems inner membrane component [Sinorhizobium medicae WSM419] Length = 299 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 202/299 (67%), Positives = 245/299 (81%), Gaps = 1/299 (0%) Query: 1 MTDVAAQSSNVASATPDTMAWDSR-ARRVVMIYLPLACFILILLFPFYWMAVTSFKPNAE 59 M + T + M++ +R RR+V++YLP+A F+ +LLFPFYWMA+T+ KPN++ Sbjct: 1 MNATTRTEDETLTDTAEGMSYLNRLPRRIVVLYLPMAVFVFVLLFPFYWMAITAVKPNSQ 60 Query: 60 LLNYKEHNPFWITSPTLAHIKHLLFDTAYPRWLKTTMLVAIGSTFLSLFASTLAAYAIER 119 L +Y ++PFW+ SPTL HIK+LLF+T+YP WL TMLVA+GST LSL AS AAYAIER Sbjct: 61 LTDYNNYSPFWVVSPTLDHIKYLLFETSYPGWLWNTMLVAVGSTILSLAASVFAAYAIER 120 Query: 120 LRFRGSPYVGLGIYLAYLVPPSILFIPLATVIVQFGLFDSPLALILVYPTFLVPFCTWLL 179 +RF G+ VGL I+LAYLVPPSILFIPLA ++ +FG++DS LALI YPTFL+PFCTWLL Sbjct: 121 VRFTGARPVGLMIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLL 180 Query: 180 IGYFKSIPYELEECALVDGATRLQILWRITLPLAVPGLISAGIFSFTLSWNEFIYALAFI 239 +GYF+SIP+ELEE ALVDGATR QIL +I LPLAVPGLISAGIF+FTLSWNEFIYAL FI Sbjct: 181 MGYFRSIPFELEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI 240 Query: 240 QSGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVALFYSLFVDYYVSSLTGAVKE 298 QS NKTVPV +LTELV GDV++WGALMAG+L GSLPV + YS FVDYYVSS+TGAVKE Sbjct: 241 QSSENKTVPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE 299 >ref|YP_004556936.1| ABC transporter integral membrane subunit [Sinorhizobium meliloti AK83] gb|AEG56056.1| ABC-type transporter, integral membrane subunit [Sinorhizobium meliloti AK83] Length = 299 Score = 415 bits (1066), Expect = e-114, Method: Compositional matrix adjust. Identities = 203/299 (67%), Positives = 245/299 (81%), Gaps = 1/299 (0%) Query: 1 MTDVAAQSSNVASATPDTMAWDSR-ARRVVMIYLPLACFILILLFPFYWMAVTSFKPNAE 59 M V + T + M++ +R RR+V++YLP+A F+ +LLFPFYWMA+T+ KPNA+ Sbjct: 1 MNTTTRVDDEVLTDTAEGMSYLNRLPRRIVVLYLPMAVFVFVLLFPFYWMAITAVKPNAQ 60 Query: 60 LLNYKEHNPFWITSPTLAHIKHLLFDTAYPRWLKTTMLVAIGSTFLSLFASTLAAYAIER 119 L +Y ++PFW+ PTL HIK+LLF+T+YP WL TMLVA+GST LSL AS AAYAIER Sbjct: 61 LTDYNNYSPFWVVRPTLDHIKYLLFETSYPGWLWNTMLVAVGSTILSLAASVFAAYAIER 120 Query: 120 LRFRGSPYVGLGIYLAYLVPPSILFIPLATVIVQFGLFDSPLALILVYPTFLVPFCTWLL 179 +RF G+ VGL I+LAYLVPPSILFIPLA ++ +FG++DS LALI YPTFL+PFCTWLL Sbjct: 121 VRFTGARPVGLLIFLAYLVPPSILFIPLAFIVFKFGIYDSKLALIFTYPTFLIPFCTWLL 180 Query: 180 IGYFKSIPYELEECALVDGATRLQILWRITLPLAVPGLISAGIFSFTLSWNEFIYALAFI 239 +GYF+SIP+ELEE ALVDGATR QIL +I LPLAVPGLISAGIF+FTLSWNEFIYAL FI Sbjct: 181 MGYFRSIPFELEESALVDGATRWQILVKIILPLAVPGLISAGIFAFTLSWNEFIYALTFI 240 Query: 240 QSGANKTVPVAILTELVTGDVYQWGALMAGSLLGSLPVALFYSLFVDYYVSSLTGAVKE 298 QS NKTVPV +LTELV GDV++WGALMAG+L GSLPV + YS FVDYYVSS+TGAVKE Sbjct: 241 QSSENKTVPVGVLTELVRGDVFEWGALMAGALFGSLPVVILYSFFVDYYVSSMTGAVKE 299