BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0026.p (374 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_782523.1| beta-lactamase [Rhodopseudomonas palustris BisA... 274 2e-71 ref|YP_485881.1| beta-lactamase [Rhodopseudomonas palustris HaA2... 273 5e-71 ref|YP_570331.1| beta-lactamase [Rhodopseudomonas palustris BisB... 269 5e-70 ref|NP_772081.1| hypothetical protein blr5441 [Bradyrhizobium ja... 266 3e-69 ref|YP_001992679.1| beta-lactamase [Rhodopseudomonas palustris T... 266 4e-69 >ref|YP_782523.1| beta-lactamase [Rhodopseudomonas palustris BisA53] gb|ABJ07543.1| beta-lactamase [Rhodopseudomonas palustris BisA53] Length = 409 Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust. Identities = 129/176 (73%), Positives = 147/176 (83%) Query: 1 VQQLYQQSRLRSRKITNAEHATMLAGMPLVCQPGAEWNYSRSTDVLGRIVEVVSGKTLGA 60 VQ+LYQQS++RSRKI+N EHAT++AGMPLVCQPGA WNYSRSTD+LGR++EV++G+TLGA Sbjct: 167 VQKLYQQSKVRSRKISNEEHATLIAGMPLVCQPGAAWNYSRSTDILGRVIEVITGQTLGA 226 Query: 61 YLTERILAPLQMTETAFHTGEANAGRLAEAFANDPWTNEKVQLFNMLEKPAMESGGGGLV 120 +LTERILAPL M+ TAFHT NAGRLAE FA DPWT +KV LFNMLEKPAMESGGGGLV Sbjct: 227 FLTERILAPLSMSATAFHTDAHNAGRLAEPFAADPWTGDKVALFNMLEKPAMESGGGGLV 286 Query: 121 STTMDYARFAQMLLNGGSLDGTRIIGRKTLEFMASDHLGTGDFGDRAAARPGDAGG 176 STTMDYARF QML+NGGSLDGTRIIGRKTL M ++HL D PG G Sbjct: 287 STTMDYARFCQMLINGGSLDGTRIIGRKTLALMTANHLERHIPADTYILPPGHGFG 342 Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust. Identities = 58/76 (76%), Positives = 66/76 (86%) Query: 299 LVSPGHSFGLGFAVRMQQGIAPFSGSVGQYFWSGMAGTFFWIDPSEDLIAVFMMQGPGQR 358 ++ PGH FGLGFAVR G+APF+GSVGQYFWSG+AGTFFW+DP+EDL AVFM QGPGQR Sbjct: 334 ILPPGHGFGLGFAVRTDPGLAPFAGSVGQYFWSGIAGTFFWVDPAEDLFAVFMSQGPGQR 393 Query: 359 EYTRSLVRNGVYAAVE 374 EY R+LVR VYAAVE Sbjct: 394 EYFRTLVRGLVYAAVE 409 >ref|YP_485881.1| beta-lactamase [Rhodopseudomonas palustris HaA2] gb|ABD06970.1| Beta-lactamase [Rhodopseudomonas palustris HaA2] Length = 407 Score = 273 bits (697), Expect = 5e-71, Method: Compositional matrix adjust. Identities = 129/176 (73%), Positives = 145/176 (82%) Query: 1 VQQLYQQSRLRSRKITNAEHATMLAGMPLVCQPGAEWNYSRSTDVLGRIVEVVSGKTLGA 60 +Q++Y++SR+RSRKITN EHA ++A MPLVCQPGA WNYSRSTD+LGR+VEV+SGKTLGA Sbjct: 165 IQKMYRESRIRSRKITNEEHAGLIAAMPLVCQPGAAWNYSRSTDILGRVVEVISGKTLGA 224 Query: 61 YLTERILAPLQMTETAFHTGEANAGRLAEAFANDPWTNEKVQLFNMLEKPAMESGGGGLV 120 +LTERILAPLQM ET FHTG N GRLAE F DPWT + V LFNMLEKPAMESGGGGLV Sbjct: 225 FLTERILAPLQMAETGFHTGAENKGRLAEPFPTDPWTGDPVALFNMLEKPAMESGGGGLV 284 Query: 121 STTMDYARFAQMLLNGGSLDGTRIIGRKTLEFMASDHLGTGDFGDRAAARPGDAGG 176 STTMDYARF QMLL+GGSLDGTRIIGRKTL+ MAS+HL D PG G Sbjct: 285 STTMDYARFCQMLLSGGSLDGTRIIGRKTLQLMASNHLEPHIPPDNYILPPGHGFG 340 Score = 133 bits (335), Expect = 4e-29, Method: Compositional matrix adjust. Identities = 59/76 (77%), Positives = 67/76 (88%) Query: 299 LVSPGHSFGLGFAVRMQQGIAPFSGSVGQYFWSGMAGTFFWIDPSEDLIAVFMMQGPGQR 358 ++ PGH FGLGFAVR + GIAPF GSVGQ++WSG+AGTFFWIDP+EDL AVFM QGPGQR Sbjct: 332 ILPPGHGFGLGFAVRTEPGIAPFPGSVGQFYWSGIAGTFFWIDPAEDLFAVFMSQGPGQR 391 Query: 359 EYTRSLVRNGVYAAVE 374 EY R+LVRN VYAAVE Sbjct: 392 EYFRTLVRNLVYAAVE 407 >ref|YP_570331.1| beta-lactamase [Rhodopseudomonas palustris BisB5] gb|ABE40430.1| beta-lactamase [Rhodopseudomonas palustris BisB5] Length = 407 Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust. Identities = 126/176 (71%), Positives = 146/176 (82%) Query: 1 VQQLYQQSRLRSRKITNAEHATMLAGMPLVCQPGAEWNYSRSTDVLGRIVEVVSGKTLGA 60 +Q++Y++SR+RSRKITN EHA+++A MPLVCQPGA WNYSRSTD+LGR++EV+SGKTLGA Sbjct: 165 IQKMYRESRVRSRKITNEEHASLIAAMPLVCQPGAGWNYSRSTDILGRVIEVISGKTLGA 224 Query: 61 YLTERILAPLQMTETAFHTGEANAGRLAEAFANDPWTNEKVQLFNMLEKPAMESGGGGLV 120 +L ERILAPLQM ETAFHTG N GRLA+AF DPWT + V LF+MLEKPAMESGGGGLV Sbjct: 225 FLNERILAPLQMAETAFHTGAENKGRLAQAFPTDPWTGDPVALFDMLEKPAMESGGGGLV 284 Query: 121 STTMDYARFAQMLLNGGSLDGTRIIGRKTLEFMASDHLGTGDFGDRAAARPGDAGG 176 STTMDYARF QMLL+GGSLDG RIIGRKTL+ MAS+HL D PG G Sbjct: 285 STTMDYARFCQMLLSGGSLDGARIIGRKTLQLMASNHLAAHIPPDNYILPPGHGFG 340 Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust. Identities = 61/90 (67%), Positives = 71/90 (78%) Query: 285 CSRSAAAXVTIQGTLVSPGHSFGLGFAVRMQQGIAPFSGSVGQYFWSGMAGTFFWIDPSE 344 S AA + ++ PGH FGLGFAVR + GIAPF GSVGQ++WSG+AGTFFWIDP+E Sbjct: 318 ASNHLAAHIPPDNYILPPGHGFGLGFAVRTEPGIAPFPGSVGQFYWSGIAGTFFWIDPAE 377 Query: 345 DLIAVFMMQGPGQREYTRSLVRNGVYAAVE 374 +L AVFM QGPGQREY R+LVRN VYAAVE Sbjct: 378 ELFAVFMSQGPGQREYFRTLVRNLVYAAVE 407 >ref|NP_772081.1| hypothetical protein blr5441 [Bradyrhizobium japonicum USDA 110] dbj|BAC50706.1| blr5441 [Bradyrhizobium japonicum USDA 110] Length = 413 Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust. Identities = 130/185 (70%), Positives = 145/185 (78%) Query: 1 VQQLYQQSRLRSRKITNAEHATMLAGMPLVCQPGAEWNYSRSTDVLGRIVEVVSGKTLGA 60 V ++YQ SR+RSRKITNAEHA ++A PLVCQPG E+NYSRSTD+LGRI+EVVSGK+LG Sbjct: 171 VHKIYQDSRVRSRKITNAEHAALVASFPLVCQPGDEFNYSRSTDILGRIIEVVSGKSLGT 230 Query: 61 YLTERILAPLQMTETAFHTGEANAGRLAEAFANDPWTNEKVQLFNMLEKPAMESGGGGLV 120 +L ER+LAPLQM ET F T EANAGRLAE FA DPWT +KV LFNMLE+P MESGGGGLV Sbjct: 231 FLAERVLAPLQMAETGFSTSEANAGRLAEPFAADPWTGDKVALFNMLEQPVMESGGGGLV 290 Query: 121 STTMDYARFAQMLLNGGSLDGTRIIGRKTLEFMASDHLGTGDFGDRAAARPGDAGGRRVA 180 STTMDYARFA ML NGG+LDG RIIGRKTLE MASDHLG + PG G A Sbjct: 291 STTMDYARFALMLRNGGTLDGNRIIGRKTLELMASDHLGPEVKTNGTLLSPGHGFGLGFA 350 Query: 181 AXRAA 185 R A Sbjct: 351 VRREA 355 Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust. Identities = 64/82 (78%), Positives = 72/82 (87%) Query: 293 VTIQGTLVSPGHSFGLGFAVRMQQGIAPFSGSVGQYFWSGMAGTFFWIDPSEDLIAVFMM 352 V GTL+SPGH FGLGFAVR + GIAPF GSVGQYFWSG+AGTFFWIDP EDL+AVFM Sbjct: 332 VKTNGTLLSPGHGFGLGFAVRREAGIAPFPGSVGQYFWSGIAGTFFWIDPKEDLLAVFMS 391 Query: 353 QGPGQREYTRSLVRNGVYAAVE 374 QGPGQR+YTR+LVR+ VYAAV+ Sbjct: 392 QGPGQRDYTRTLVRDLVYAAVD 413 >ref|YP_001992679.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] gb|ACF02204.1| beta-lactamase [Rhodopseudomonas palustris TIE-1] Length = 407 Score = 266 bits (680), Expect = 4e-69, Method: Compositional matrix adjust. Identities = 126/176 (71%), Positives = 143/176 (81%) Query: 1 VQQLYQQSRLRSRKITNAEHATMLAGMPLVCQPGAEWNYSRSTDVLGRIVEVVSGKTLGA 60 + ++Y+ SR+RSRKITN EHAT++A MPLVCQPGA WNYSRSTD+LGR++EVV+GKTLG Sbjct: 165 IHKMYRASRIRSRKITNEEHATLVASMPLVCQPGAAWNYSRSTDILGRVIEVVAGKTLGT 224 Query: 61 YLTERILAPLQMTETAFHTGEANAGRLAEAFANDPWTNEKVQLFNMLEKPAMESGGGGLV 120 +LTERILAPLQM+ET FHT N GRLAEAF DPWT + V LFNMLEKPAMESGGGGLV Sbjct: 225 FLTERILAPLQMSETGFHTAADNKGRLAEAFPADPWTGDPVALFNMLEKPAMESGGGGLV 284 Query: 121 STTMDYARFAQMLLNGGSLDGTRIIGRKTLEFMASDHLGTGDFGDRAAARPGDAGG 176 STTMDYARF QMLL GG+LDG RIIGRKTLE MAS+HL D PG+ G Sbjct: 285 STTMDYARFCQMLLGGGTLDGARIIGRKTLELMASNHLEPHIPPDNYILPPGNGFG 340 Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust. Identities = 56/76 (73%), Positives = 66/76 (86%) Query: 299 LVSPGHSFGLGFAVRMQQGIAPFSGSVGQYFWSGMAGTFFWIDPSEDLIAVFMMQGPGQR 358 ++ PG+ FGLGFAVR Q GI+PF GSVGQ++WSG+AGTFFWIDP+E L AVFM QGPGQR Sbjct: 332 ILPPGNGFGLGFAVRTQSGISPFPGSVGQFYWSGIAGTFFWIDPAEQLFAVFMSQGPGQR 391 Query: 359 EYTRSLVRNGVYAAVE 374 EY R+LVR+ VYAAVE Sbjct: 392 EYFRTLVRDLVYAAVE 407