BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0014.p         (127 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774515.1| hypothetical protein bll7875 [Bradyrhizobium ja...   138   3e-31
ref|ZP_06888522.1| Protein of unknown function DUF2059 [Methylos...    58   4e-07
ref|ZP_02166733.1| hypothetical protein HPDFL43_09852 [Hoeflea p...    54   6e-06
ref|YP_004181161.1| hypothetical protein AciPR4_0330 [Terriglobu...    49   2e-04
ref|YP_004088504.1| hypothetical protein Astex_2714 [Asticcacaul...    47   0.001

>ref|NP_774515.1| hypothetical protein bll7875 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53140.1| bll7875 [Bradyrhizobium japonicum USDA 110]
          Length = 173

 Score =  138 bits (348), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 68/127 (53%), Positives = 99/127 (77%)

Query: 1   VVTLKLGDQYKALLPAILFRIKPLVTQERAELESDYDLIVTKAGDLYTPYYNEMREQAAA 60
           VVTLK+ DQY+ALLP +L +++P+V Q+R E+E DYD +     ++Y P+   M +Q AA
Sbjct: 47  VVTLKIADQYRALLPQLLLKLRPVVAQDRPEIERDYDALTAPGAEIYAPFVASMIDQIAA 106

Query: 61  VYAANFTLDELFQMDAFFRQPAGQKLIEKWSAMSLQTAQIGQDVGRKASEDLRQRLTEAL 120
           +YAA+FT+DEL Q++AF+ QP G+K +EK  A++  + QIGQDVG+KA+++L+QRL EAL
Sbjct: 107 LYAASFTVDELRQIEAFYAQPVGRKFLEKSDALAQASMQIGQDVGQKAADELKQRLIEAL 166

Query: 121 RQKGHRL 127
           RQKGH+L
Sbjct: 167 RQKGHKL 173


>ref|ZP_06888522.1| Protein of unknown function DUF2059 [Methylosinus trichosporium
           OB3b]
 gb|EFH03019.1| Protein of unknown function DUF2059 [Methylosinus trichosporium
           OB3b]
          Length = 182

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 36/122 (29%), Positives = 63/122 (51%)

Query: 6   LGDQYKALLPAILFRIKPLVTQERAELESDYDLIVTKAGDLYTPYYNEMREQAAAVYAAN 65
           +   ++ ++P  L +I   VT+ R EL +D +L++ +    +    +EM + AA +YA  
Sbjct: 61  ISSSFQLIIPQYLEQIALSVTRTRPELVADLNLVLAEIRPDFDKKVDEMIDSAAHLYAQR 120

Query: 66  FTLDELFQMDAFFRQPAGQKLIEKWSAMSLQTAQIGQDVGRKASEDLRQRLTEALRQKGH 125
            T  EL  + AFF+ P+G+K +     +        Q   +K S D+  R+ E +R+KGH
Sbjct: 121 LTQKELEDVSAFFKSPSGRKYVGSQPFLMNDMFVAMQAWSQKISVDMMARVREEMRKKGH 180

Query: 126 RL 127
            L
Sbjct: 181 EL 182


>ref|ZP_02166733.1| hypothetical protein HPDFL43_09852 [Hoeflea phototrophica DFL-43]
 gb|EDQ33531.1| hypothetical protein HPDFL43_09852 [Hoeflea phototrophica DFL-43]
          Length = 177

 Score = 54.3 bits (129), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 32/116 (27%), Positives = 58/116 (50%)

Query: 8   DQYKALLPAILFRIKPLVTQERAELESDYDLIVTKAGDLYTPYYNEMREQAAAVYAANFT 67
           DQ+ A++P    R+K  + +   +L+      V +      P   ++  +AA +YA  F+
Sbjct: 51  DQFDAIIPTAAERLKVSLIRANGDLQEIISATVDEEALKIVPRRGDLEREAAQIYAKAFS 110

Query: 68  LDELFQMDAFFRQPAGQKLIEKWSAMSLQTAQIGQDVGRKASEDLRQRLTEALRQK 123
            +EL  +  F+  PAGQKLIE    ++ +  +  +      S DL Q + +AL++K
Sbjct: 111 EEELTAITDFYTSPAGQKLIENGPLVTRELIKSAEIWSSGVSRDLSQNVNKALQEK 166


>ref|YP_004181161.1| hypothetical protein AciPR4_0330 [Terriglobus saanensis SP1PR4]
 gb|ADV81167.1| Protein of unknown function DUF2059 [Terriglobus saanensis SP1PR4]
          Length = 219

 Score = 49.3 bits (116), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 13/101 (12%)

Query: 26  TQERAELESDY----DLIVTKAGDLYTPYYNEMREQAAAVYAANFTLDELFQMDAFFRQP 81
           T E+ +L +DY    D + T A D     Y ++R+  A VYA+NFT  EL  + AF+  P
Sbjct: 97  TPEQQKLATDYTAKIDAMTTSALD-----YAKLRQPLADVYASNFTDSELDSIIAFYGSP 151

Query: 82  AGQKLIEKWSAMSLQTAQIGQDVGRKASEDLRQRLTEALRQ 122
           AG+  ++K  A+  QT  + Q V +    DL+ +L E  ++
Sbjct: 152 AGKVFVDKTQAVGEQTNALFQGVLK----DLQPKLGETTKE 188


>ref|YP_004088504.1| hypothetical protein Astex_2714 [Asticcacaulis excentricus CB 48]
 gb|ADU14353.1| Protein of unknown function DUF2059 [Asticcacaulis excentricus CB
           48]
          Length = 169

 Score = 46.6 bits (109), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 23/82 (28%), Positives = 47/82 (57%)

Query: 45  DLYTPYYNEMREQAAAVYAANFTLDELFQMDAFFRQPAGQKLIEKWSAMSLQTAQIGQDV 104
           D  + Y  +M +++A +YA  +TL+EL  M +F+  P G+K++EK   +  +  +I  D+
Sbjct: 84  DATSAYMVKMMDRSAEIYAEVYTLEELEYMVSFYEDPRGKKILEKMPLVMPKATKIAMDL 143

Query: 105 GRKASEDLRQRLTEALRQKGHR 126
             +  ED+++R+   +  K  +
Sbjct: 144 LPEFQEDMKKRVCAVIDCKTAK 165