BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0168.0006.p (302 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242032.1| hypothetical protein BBta_6203 [Bradyrhizobi... 352 3e-95 ref|YP_001207573.1| hypothetical protein BRADO5687 [Bradyrhizobi... 341 8e-92 ref|YP_002543438.1| hypothetical protein Arad_0941 [Agrobacteriu... 285 5e-75 ref|YP_532892.1| hypothetical protein RPC_3028 [Rhodopseudomonas... 275 7e-72 ref|YP_782898.1| hypothetical protein RPE_3992 [Rhodopseudomonas... 271 8e-71 >ref|YP_001242032.1| hypothetical protein BBta_6203 [Bradyrhizobium sp. BTAi1] gb|ABQ38126.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 298 Score = 352 bits (904), Expect = 3e-95, Method: Compositional matrix adjust. Identities = 171/255 (67%), Positives = 207/255 (81%), Gaps = 2/255 (0%) Query: 41 LSGCASAPMTRGGSLASYDNLTPSDGVLAKSLVRVNKDEVLAAKTVRIVPTTFAQAASPT 100 L+GCA+APMT+ G+LASY L+ S+GVLAKS++ V+KD VLAA T+RI+PT+F+ A+ Sbjct: 29 LAGCATAPMTQSGALASYQTLSESNGVLAKSVLNVDKDAVLAASTIRIMPTSFSGQANEV 88 Query: 101 LSQEQRHLVANAIDRSLCVGLSERLQVVGPDQPADLSVHALVTQAAPTDEVAAGTSKVVS 160 LS EQR LVANA+DR+LC+ LSER VV P + ADL+ +TQA TD VAAG SKVVS Sbjct: 89 LSDEQRRLVANAVDRALCLNLSERFTVVAPYEKADLTTRTFITQATATDPVAAGASKVVS 148 Query: 161 FLPSALGAGVPVPVPRLPVGLGSLTVEAEVRDQASRQQAAMIWARGANSFTNSPMVSSAG 220 +P ALG VPVPVPRLP+GLGSLTVEAE D+ RQQAAM+WARGANSFTNSP++S AG Sbjct: 149 AVPGALG--VPVPVPRLPIGLGSLTVEAEAVDRKGRQQAAMVWARGANSFTNSPVLSQAG 206 Query: 221 DAYDLAPSFSDDFSKLVVTGATPFGKAPELPSFDKIGATLGGKPKYAACEAFGLNPGLVG 280 DAYDLA SFS DF +++VTG TPFGKAP+LPS +IGA LGGKP++AACEAFG +PGL+G Sbjct: 207 DAYDLAASFSADFGQMLVTGETPFGKAPKLPSIQRIGAALGGKPRHAACEAFGRDPGLIG 266 Query: 281 MAAGKLGLPPEWSDK 295 M A +LG PPEW DK Sbjct: 267 MVANRLGAPPEWVDK 281 >ref|YP_001207573.1| hypothetical protein BRADO5687 [Bradyrhizobium sp. ORS 278] emb|CAL79356.1| conserved hypothetical protein; putative exported protein [Bradyrhizobium sp. ORS 278] Length = 295 Score = 341 bits (875), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 172/261 (65%), Positives = 206/261 (78%), Gaps = 3/261 (1%) Query: 41 LSGCASAPMTRGGSLASYDNLTPSDGVLAKSLVRVNKDEVLAAKTVRIVPTTFAQAASPT 100 +SGCA+AP+T+ G+LASY +L S+GVLAKS++ +NKD VLAA TVRI+PT FA Sbjct: 27 VSGCATAPITQSGALASYRSLEESNGVLAKSVLNINKDNVLAATTVRIIPTMFAGDVGSV 86 Query: 101 LSQEQRHLVANAIDRSLCVGLSERLQVVGPDQPADLSVHALVTQAAPTDEVAAGTSKVVS 160 L + Q+ LV NAIDR+LC+ LSER VV P++ ADL+ +TQ A TD VAAG SKVVS Sbjct: 87 LGEPQQRLVTNAIDRALCLDLSERFIVVAPNERADLTTRTFITQTAATDPVAAGASKVVS 146 Query: 161 FLPSALGAGVPVPVPRLPVGLGSLTVEAEVRDQASRQQAAMIWARGANSFTNSPMVSSAG 220 +P ALG VPVPVPRLP+GLGSLTVEAE D+ RQQAAM+WARGANSFTNSP++S AG Sbjct: 147 AVPGALG--VPVPVPRLPIGLGSLTVEAEAVDRRGRQQAAMVWARGANSFTNSPVISQAG 204 Query: 221 DAYDLAPSFSDDFSKLVVTGATPFGKAPELPSFDKIGATLGGKPKYAACEAFGLNPGLVG 280 DAYDLA SFS DFS+L+VTG TPFGK P++PS D+IGA LGGKPK ACEA+G +PGL+G Sbjct: 205 DAYDLAGSFSADFSQLLVTGETPFGKPPKIPSIDRIGAALGGKPKNPACEAYGRDPGLIG 264 Query: 281 MAAGKLGLPPEWSDK-APATA 300 M A +LG PPEW DK APA A Sbjct: 265 MVANRLGAPPEWIDKGAPADA 285 >ref|YP_002543438.1| hypothetical protein Arad_0941 [Agrobacterium radiobacter K84] gb|ACM25513.1| conserved hypothetical protein [Agrobacterium radiobacter K84] Length = 301 Score = 285 bits (730), Expect = 5e-75, Method: Compositional matrix adjust. Identities = 140/257 (54%), Positives = 183/257 (71%), Gaps = 2/257 (0%) Query: 40 LLSGCASAPMTRGGSLASYDNLTPSDGVLAKSLVRVNKDEVLAAKTVRIVPTTFA-QAAS 98 +++GCASAP+ R GSL SYD L SDG++ +SL++VNKDE+LAAKTV+I+PT F+ +A S Sbjct: 40 MVAGCASAPLDRAGSLRSYDGLKQSDGMVTRSLLKVNKDEILAAKTVKIIPTAFSMRAES 99 Query: 99 PTLSQEQRHLVANAIDRSLCVGLSERLQVVGPDQPADLSVHALVTQAAPTDEVAAGTSKV 158 + QR+LV NA+DR+LC GLSER +VG +PADL+V A+VTQ PT+ A G SKV Sbjct: 100 AAFTPAQRNLVTNAVDRTLCSGLSERFVIVGLSEPADLTVRAVVTQVKPTNTTAVGASKV 159 Query: 159 VSFLPSALGAGVPVPVPRLPVGLGSLTVEAEVRDQASRQQAAMIWARGANSFTNSPMVSS 218 S S L GVPVPVPR+P+G+GSL++EAE D Q+A MIW RGAN+F +S V+ Sbjct: 160 ASVAKSVLLPGVPVPVPRIPIGMGSLSLEAEAIDGQGAQKAVMIWGRGANAFFDSGTVAK 219 Query: 219 AGDAYDLAPSFSDDFSKLVVTGATPFGKAPELPSFDKIGATLGGKPKYAACEAFGLNPGL 278 GDAY LA F DFSK++V G TPFG P PS K+ +G PKY AC+ FG +PG+ Sbjct: 220 EGDAYSLAAKFGSDFSKMLVKGRTPFGTMP-FPSRAKLAGLVGRAPKYEACKVFGKSPGV 278 Query: 279 VGMAAGKLGLPPEWSDK 295 G ++GLPP+W+DK Sbjct: 279 AGFIGERIGLPPKWTDK 295 >ref|YP_532892.1| hypothetical protein RPC_3028 [Rhodopseudomonas palustris BisB18] gb|ABD88573.1| hypothetical protein RPC_3028 [Rhodopseudomonas palustris BisB18] Length = 362 Score = 275 bits (702), Expect = 7e-72, Method: Compositional matrix adjust. Identities = 145/275 (52%), Positives = 193/275 (70%), Gaps = 5/275 (1%) Query: 22 NGQPNRPSLLAGAAVAMALLSGCASAPMTRGGSLASYDNLTPSDGVLAKSLVRVNKDEVL 81 GQP+ PSLL +A LSGCA+AP+ +G L+SYD L SDG + KS + V K++V Sbjct: 82 RGQPS-PSLLT--MLAAMTLSGCATAPLVQGTGLSSYDGLQQSDGKITKSRLHVKKEQVA 138 Query: 82 AAKTVRIVPTTFAQAASPTLSQEQRHLVANAIDRSLCVGLSERLQVVGPDQPADLSVHAL 141 AAKT+ I PT F A+PTLS EQR LVANA++R+LC+ LS+R +V+ +PADL+V A Sbjct: 139 AAKTINIAPTLFPPNAAPTLSSEQRALVANAVNRALCISLSDRFEVIAAGRPADLTVRAA 198 Query: 142 VTQAAPTDEVAAGTSKVVSFLPSALGAG-VPVPVPRLPVGLGSLTVEAEVRDQASRQQAA 200 VT A TDE AAG S S + G VP+P+PR+P+GLG L++EAE D+ RQQAA Sbjct: 199 VTHATETDEAAAGVSVAASIGTKFVDMGSVPIPIPRVPIGLGELSIEAEAVDRGGRQQAA 258 Query: 201 MIWARGANSFTNSPMVSSAGDAYDLAPSFSDDFSKLVVTGATPFGKAP-ELPSFDKIGAT 259 ++WARGA +F +SP VS AGDAY+LA SF +DF+ L+ G +PFG +PS+ KI + Sbjct: 259 IVWARGATAFFSSPRVSKAGDAYELAGSFGEDFATLLNKGESPFGGVGFSVPSWQKISSN 318 Query: 260 LGGKPKYAACEAFGLNPGLVGMAAGKLGLPPEWSD 294 +G PKYAACE++G +PG+ G+ GKLG PPEW+D Sbjct: 319 VGLAPKYAACESYGRSPGVAGLVGGKLGFPPEWTD 353 >ref|YP_782898.1| hypothetical protein RPE_3992 [Rhodopseudomonas palustris BisA53] gb|ABJ07918.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 363 Score = 271 bits (693), Expect = 8e-71, Method: Compositional matrix adjust. Identities = 143/272 (52%), Positives = 188/272 (69%), Gaps = 3/272 (1%) Query: 25 PNRPSLLAGAAVAMALLSGCASAPMTRGGSLASYDNLTPSDGVLAKSLVRVNKDEVLAAK 84 P P LL A A+ L GCA+AP+ +G L+SYD L SDG + KS + V K++V AAK Sbjct: 84 PTSPLLLTMLA-AVTWLPGCATAPLVQGSGLSSYDGLQQSDGKITKSRLHVKKEQVAAAK 142 Query: 85 TVRIVPTTFAQAASPTLSQEQRHLVANAIDRSLCVGLSERLQVVGPDQPADLSVHALVTQ 144 T+ I PT F +PTLS EQR LVANA++R+LC+ LS+R +VV P PADL+V A VT Sbjct: 143 TISIAPTQFPPNVAPTLSGEQRALVANAVNRALCISLSDRFEVVAPGSPADLTVRAAVTH 202 Query: 145 AAPTDEVAAGTSKVVSFLPSALGAG-VPVPVPRLPVGLGSLTVEAEVRDQASRQQAAMIW 203 A TDE AAG S S + G VP+P+PR+P+GLG L++EAE D+A RQQAA++W Sbjct: 203 ATETDEAAAGVSVAASIGTKFVDMGSVPIPIPRVPIGLGELSIEAEAVDRAGRQQAAIVW 262 Query: 204 ARGANSFTNSPMVSSAGDAYDLAPSFSDDFSKLVVTGATPFGKAP-ELPSFDKIGATLGG 262 RGA +F +SP VS AGDAY+LA SF +DF+ L+ G +PFG +PS+ KI + +G Sbjct: 263 GRGATAFFSSPRVSKAGDAYELAGSFGEDFATLLNKGESPFGGVGFSVPSWQKISSNVGL 322 Query: 263 KPKYAACEAFGLNPGLVGMAAGKLGLPPEWSD 294 PKYAACE++G +PG+ G+ GKLG PPEW+D Sbjct: 323 APKYAACESYGRSPGIAGLVGGKLGFPPEWTD 354