BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0168.0001.p         (138 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_772055.1| 50S ribosomal protein L11 [Bradyrhizobium japon...   282   1e-74
ref|YP_001240992.1| 50S ribosomal protein L11 [Bradyrhizobium sp...   280   5e-74
ref|YP_001205088.1| 50S ribosomal protein L11 [Bradyrhizobium sp...   278   1e-73
ref|ZP_07028463.1| ribosomal protein L11 [Afipia sp. 1NLS2] >gi|...   276   6e-73
ref|ZP_08630417.1| LSU ribosomal protein L11p [Bradyrhizobiaceae...   275   1e-72

>ref|NP_772055.1| 50S ribosomal protein L11 [Bradyrhizobium japonicum USDA 110]
 sp|Q89J69.1|RL11_BRAJA RecName: Full=50S ribosomal protein L11
 dbj|BAC50680.1| 50S ribosomal Protein L11 [Bradyrhizobium japonicum USDA 110]
          Length = 142

 Score =  282 bits (721), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 137/138 (99%), Positives = 138/138 (100%)

Query: 1   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 60
           VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD
Sbjct: 5   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 64

Query: 61  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGQVTKAQVREIAEKKMKDLNCDTIES 120
           RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAG+VTKAQVREIAEKKMKDLNCDTIES
Sbjct: 65  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDTIES 124

Query: 121 AMKMVEGSARSMGLEVAG 138
           AMKMVEGSARSMGLEVAG
Sbjct: 125 AMKMVEGSARSMGLEVAG 142


>ref|YP_001240992.1| 50S ribosomal protein L11 [Bradyrhizobium sp. BTAi1]
 sp|A5ELP2.1|RL11_BRASB RecName: Full=50S ribosomal protein L11
 gb|ABQ37086.1| LSU ribosomal protein L11P [Bradyrhizobium sp. BTAi1]
          Length = 142

 Score =  280 bits (716), Expect = 5e-74,   Method: Compositional matrix adjust.
 Identities = 135/138 (97%), Positives = 138/138 (100%)

Query: 1   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 60
           VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPV+ITIYAD
Sbjct: 5   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIYAD 64

Query: 61  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGQVTKAQVREIAEKKMKDLNCDTIES 120
           RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAG+VTKAQVREIAEKKMKDLNCD+IES
Sbjct: 65  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDSIES 124

Query: 121 AMKMVEGSARSMGLEVAG 138
           AMKMVEGSARSMGLEVAG
Sbjct: 125 AMKMVEGSARSMGLEVAG 142


>ref|YP_001205088.1| 50S ribosomal protein L11 [Bradyrhizobium sp. ORS 278]
 sp|A4YSH5.1|RL11_BRASO RecName: Full=50S ribosomal protein L11
 emb|CAL76851.1| 50S ribosomal subunit protein L11 [Bradyrhizobium sp. ORS 278]
          Length = 142

 Score =  278 bits (712), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 134/138 (97%), Positives = 138/138 (100%)

Query: 1   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 60
           VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPV+ITIYAD
Sbjct: 5   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIYAD 64

Query: 61  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGQVTKAQVREIAEKKMKDLNCDTIES 120
           RSFTFEMKTPPMS+FLKQAAKIQSGSKAPGRDKAG+VTKAQVREIAEKKMKDLNCD+IES
Sbjct: 65  RSFTFEMKTPPMSFFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDSIES 124

Query: 121 AMKMVEGSARSMGLEVAG 138
           AMKMVEGSARSMGLEVAG
Sbjct: 125 AMKMVEGSARSMGLEVAG 142


>ref|ZP_07028463.1| ribosomal protein L11 [Afipia sp. 1NLS2]
 gb|EFI50453.1| ribosomal protein L11 [Afipia sp. 1NLS2]
          Length = 142

 Score =  276 bits (707), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 133/138 (96%), Positives = 137/138 (99%)

Query: 1   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 60
           VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQK EKNTPIPV+ITIYAD
Sbjct: 5   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKMEKNTPIPVVITIYAD 64

Query: 61  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGQVTKAQVREIAEKKMKDLNCDTIES 120
           RSFTFEMKTPPMS+FLKQAAKIQSGSKAPGRDKAG+VTKAQVREIAEKKMKDLNCDT+ES
Sbjct: 65  RSFTFEMKTPPMSFFLKQAAKIQSGSKAPGRDKAGKVTKAQVREIAEKKMKDLNCDTVES 124

Query: 121 AMKMVEGSARSMGLEVAG 138
           AMKMVEGSARSMGLEVAG
Sbjct: 125 AMKMVEGSARSMGLEVAG 142


>ref|ZP_08630417.1| LSU ribosomal protein L11p [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP06796.1| LSU ribosomal protein L11p [Bradyrhizobiaceae bacterium SG-6C]
          Length = 142

 Score =  275 bits (704), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 132/138 (95%), Positives = 137/138 (99%)

Query: 1   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVIITIYAD 60
           VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPV+ITIYAD
Sbjct: 5   VTGYLKLQVPAGAANPSPPIGPALGQRGLNIMEFCKAFNAQTQKEEKNTPIPVVITIYAD 64

Query: 61  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDKAGQVTKAQVREIAEKKMKDLNCDTIES 120
           RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRD AG+VTKAQVREIAEKKMKDLNCDT+E+
Sbjct: 65  RSFTFEMKTPPMSYFLKQAAKIQSGSKAPGRDVAGKVTKAQVREIAEKKMKDLNCDTVEA 124

Query: 121 AMKMVEGSARSMGLEVAG 138
           AMKMVEGSARSMGL+VAG
Sbjct: 125 AMKMVEGSARSMGLQVAG 142