BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0167.0016.p (383 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_105901.1| transcriptional regulator [Mesorhizobium loti M... 480 e-133 ref|YP_004417126.1| transcriptional regulator [Pusillimonas sp. ... 449 e-124 ref|NP_888880.1| transcriptional regulator [Bordetella bronchise... 447 e-123 ref|NP_883584.1| transcriptional regulator [Bordetella parapertu... 444 e-122 ref|YP_675481.1| ThiJ/PfpI [Mesorhizobium sp. BNC1] >gi|11028625... 430 e-118 >ref|NP_105901.1| transcriptional regulator [Mesorhizobium loti MAFF303099] dbj|BAB51687.1| transcriptional regulator [Mesorhizobium loti MAFF303099] Length = 353 Score = 480 bits (1236), Expect = e-133, Method: Compositional matrix adjust. Identities = 241/353 (68%), Positives = 277/353 (78%) Query: 26 FTLPAASAFRVPPPIATQEHDAMLAALKPPKRARPLIAILGINDMTETTDYLMPYGILKR 85 +LPAAS V P I T+E A LAALK PKR RPLIAI+GIND TETTDYLMPYGIL+R Sbjct: 1 MSLPAASQAAVQPAIDTREAAATLAALKSPKRQRPLIAIIGINDGTETTDYLMPYGILRR 60 Query: 86 ADVADVVTLATGPGPVALFPVLKVEPDATIAAFDAAHPDGADYVIVPAMSRDDDPTVMQW 145 ADVADVV LAT PGP+ L P L++EPDAT AFDA HPDGADYVIVPAM RDDD V++W Sbjct: 61 ADVADVVALATRPGPMRLHPALQIEPDATTTAFDAEHPDGADYVIVPAMMRDDDADVLEW 120 Query: 146 IRQQAEKGAVIVAVCAGAKVLASTGQLDGRRATTHWFYLKKWRNKHPEIRYVADRRIVVD 205 IR QA KGA+++ +CAGAKV+ ++G LDG+RATTHW+ + + R KHP I YVADRR VVD Sbjct: 121 IRSQAAKGAMVIGICAGAKVVGASGLLDGKRATTHWYSVGELREKHPTIHYVADRRFVVD 180 Query: 206 HGVATTTGISASMPMSLTLIEAIAGRAKAEAVAREIGLPGWDARHDSNAFKFTRPFALTA 265 GVATTTGI+ASMPM LTLIEAIAGR KAEAV R++GL WDARHDS AFKFTRPFAL A Sbjct: 181 QGVATTTGITASMPMMLTLIEAIAGRDKAEAVGRDLGLAHWDARHDSGAFKFTRPFALAA 240 Query: 266 IQNTLAFWNREQLGLALAPGVDEVSLALVADSWSRTYRSHAVTFAATGDAVTTRNGLRVY 325 I NTLA EQLG+ L G+DEVSLALVAD+WSRTYRS AVTFA A+ +R+GLR+ Sbjct: 241 IGNTLAVLGHEQLGIPLTSGMDEVSLALVADAWSRTYRSGAVTFAGKDSAIVSRDGLRIL 300 Query: 326 PQVVASAWSADGLLPAVGTAPPAQALDRALAGIETRYGRGTADFVAMQLEYPR 378 P +A+ W D L+PA PA+ALD+AL I R+G TADFVAMQLEYPR Sbjct: 301 PDQIATDWPVDRLVPATADPRPARALDQALQDISARHGARTADFVAMQLEYPR 353 >ref|YP_004417126.1| transcriptional regulator [Pusillimonas sp. T7-7] gb|AEC20502.1| transcriptional regulator [Pusillimonas sp. T7-7] Length = 386 Score = 449 bits (1156), Expect = e-124, Method: Compositional matrix adjust. Identities = 228/378 (60%), Positives = 279/378 (73%) Query: 1 MTWRLLAWCGIAVAALVPIIGGIWLFTLPAASAFRVPPPIATQEHDAMLAALKPPKRARP 60 M R W + V A++ + W F+LP A P + E AM AAL+ PKR RP Sbjct: 1 MNARCFLWGSLGVVAVLLALFVAWFFSLPETPAALALPSVPAVETQAMQAALQAPKRERP 60 Query: 61 LIAILGINDMTETTDYLMPYGILKRADVADVVTLATGPGPVALFPVLKVEPDATIAAFDA 120 LIAIL IND TETTDYLM YG LKRADVADV LAT PGPV LFP LK++P+AT+A FD Sbjct: 61 LIAILAINDATETTDYLMSYGTLKRADVADVRALATQPGPVTLFPALKIQPEATVAQFDE 120 Query: 121 AHPDGADYVIVPAMSRDDDPTVMQWIRQQAEKGAVIVAVCAGAKVLASTGQLDGRRATTH 180 +PDGADYVIVPAMSRDDDP +QWIRQQA KG++I++VCAGAKV+A+ G LDG+ ATTH Sbjct: 121 RYPDGADYVIVPAMSRDDDPQALQWIRQQAAKGSIIISVCAGAKVVAAAGMLDGKAATTH 180 Query: 181 WFYLKKWRNKHPEIRYVADRRIVVDHGVATTTGISASMPMSLTLIEAIAGRAKAEAVARE 240 W+YL + R +HPE+RYV DRRIV+D GVA+TTGI+ASMPM LTLIEAIAG+ KA AVA++ Sbjct: 181 WYYLDELREQHPEVRYVKDRRIVIDQGVASTTGITASMPMMLTLIEAIAGKDKAMAVAKD 240 Query: 241 IGLPGWDARHDSNAFKFTRPFALTAIQNTLAFWNREQLGLALAPGVDEVSLALVADSWSR 300 +G+ W A HDS+AF FTR FA TAI+N LAFW +E+LG+ L PG+DEVSLALVAD+WSR Sbjct: 241 LGVSTWSASHDSDAFTFTRSFAWTAIRNRLAFWKKEKLGIPLQPGIDEVSLALVADAWSR 300 Query: 301 TYRSHAVTFAATGDAVTTRNGLRVYPQVVASAWSADGLLPAVGTAPPAQALDRALAGIET 360 TYRS+A+T+ G + T+NGLR+ P A+ W + + P +AL + LA + Sbjct: 301 TYRSNALTYTDDGRPIKTQNGLRLIPDRTATIWPDERRISETVRLKPVEALGQTLAHMAE 360 Query: 361 RYGRGTADFVAMQLEYPR 378 RYG TADFVAMQLEYP Sbjct: 361 RYGDDTADFVAMQLEYPE 378 >ref|NP_888880.1| transcriptional regulator [Bordetella bronchiseptica RB50] emb|CAE32833.1| probable transcriptional regulator [Bordetella bronchiseptica RB50] Length = 469 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 227/354 (64%), Positives = 267/354 (75%) Query: 24 WLFTLPAASAFRVPPPIATQEHDAMLAALKPPKRARPLIAILGINDMTETTDYLMPYGIL 83 WL +LP+A A PPIA E A+LA+L P +R RPLIA++GIND TETTDYL+P GIL Sbjct: 24 WLISLPSAPAGLASPPIAASETTALLASLAPTRRQRPLIAVVGINDATETTDYLVPTGIL 83 Query: 84 KRADVADVVTLATGPGPVALFPVLKVEPDATIAAFDAAHPDGADYVIVPAMSRDDDPTVM 143 +RADVADVVTLATGPGPV LFP L VE DAT+ AFDA +P GADYVIVPAMSRDDDP V+ Sbjct: 84 RRADVADVVTLATGPGPVRLFPALTVEADATLDAFDARNPAGADYVIVPAMSRDDDPAVL 143 Query: 144 QWIRQQAEKGAVIVAVCAGAKVLASTGQLDGRRATTHWFYLKKWRNKHPEIRYVADRRIV 203 W+R+QA KGA I+ VCAGAKV+A+ LDG+RATTHW+YLK+ +HP IRYVADRR+V Sbjct: 144 AWLREQARKGATIIGVCAGAKVVAAASLLDGKRATTHWYYLKELLGRHPSIRYVADRRVV 203 Query: 204 VDHGVATTTGISASMPMSLTLIEAIAGRAKAEAVAREIGLPGWDARHDSNAFKFTRPFAL 263 D GV TTTG++ASMPM+L LIEAIAGR KA AVA+++ +P WD RH S AF TRPFA Sbjct: 204 ADRGVVTTTGVTASMPMTLLLIEAIAGRHKARAVAQDLAIPAWDIRHASGAFALTRPFAT 263 Query: 264 TAIQNTLAFWNREQLGLALAPGVDEVSLALVADSWSRTYRSHAVTFAATGDAVTTRNGLR 323 T + N LAFWNREQ+G+ L PG+DEVSLAL AD+WSRTYRS AV++A A+ TRN +R Sbjct: 264 TVLGNVLAFWNREQIGIELRPGMDEVSLALAADAWSRTYRSQAVSYAQASGAIATRNRIR 323 Query: 324 VYPQVVASAWSADGLLPAVGTAPPAQALDRALAGIETRYGRGTADFVAMQLEYP 377 V P A+ W A + PAQ LDR L I RYG TA VAMQLEYP Sbjct: 324 VIPDAAAADWPATRRIDTYTDQAPAQTLDRTLRAIAGRYGAPTASVVAMQLEYP 377 >ref|NP_883584.1| transcriptional regulator [Bordetella parapertussis 12822] emb|CAE36575.1| probable transcriptional regulator [Bordetella parapertussis] Length = 397 Score = 444 bits (1142), Expect = e-122, Method: Compositional matrix adjust. Identities = 226/354 (63%), Positives = 266/354 (75%) Query: 24 WLFTLPAASAFRVPPPIATQEHDAMLAALKPPKRARPLIAILGINDMTETTDYLMPYGIL 83 WL +LP+A A PPIA E A+LA+L P +R RPLIA++GIND TETTDYL+P GIL Sbjct: 24 WLISLPSAPAGLASPPIAASETTALLASLAPTRRQRPLIAVVGINDATETTDYLVPTGIL 83 Query: 84 KRADVADVVTLATGPGPVALFPVLKVEPDATIAAFDAAHPDGADYVIVPAMSRDDDPTVM 143 +RADVADVVTLATGPGPV LFP L VE DAT+ AFDA +P GADYVIVPAM+RDDDP V+ Sbjct: 84 QRADVADVVTLATGPGPVRLFPALTVEADATLDAFDARNPAGADYVIVPAMTRDDDPAVL 143 Query: 144 QWIRQQAEKGAVIVAVCAGAKVLASTGQLDGRRATTHWFYLKKWRNKHPEIRYVADRRIV 203 W+R QA KGA I+ VCAGAKV+A+ LDG+RATTHW+YLK+ +HP IRYVADRR+V Sbjct: 144 AWLRGQARKGATIIGVCAGAKVVAAASLLDGKRATTHWYYLKELLGRHPSIRYVADRRVV 203 Query: 204 VDHGVATTTGISASMPMSLTLIEAIAGRAKAEAVAREIGLPGWDARHDSNAFKFTRPFAL 263 D GV TTTG++ASMPM+L LIEAIAGR KA AVA+++ +P WD RH S AF TRPFA Sbjct: 204 ADRGVVTTTGVTASMPMTLLLIEAIAGRHKARAVAQDLAIPAWDIRHASGAFALTRPFAT 263 Query: 264 TAIQNTLAFWNREQLGLALAPGVDEVSLALVADSWSRTYRSHAVTFAATGDAVTTRNGLR 323 T + N LAFWNREQ+G+ L PG+DEVSLAL AD+WSRTYRS AV++A A+ TRN +R Sbjct: 264 TVLGNVLAFWNREQIGIELRPGMDEVSLALAADAWSRTYRSQAVSYAQASGAIATRNRIR 323 Query: 324 VYPQVVASAWSADGLLPAVGTAPPAQALDRALAGIETRYGRGTADFVAMQLEYP 377 V P A+ W A + PAQ LDR L I RYG TA VAMQLEYP Sbjct: 324 VIPDAAAADWPATRRIDTYTDQAPAQTLDRTLRAIAGRYGAPTASVVAMQLEYP 377 >ref|YP_675481.1| ThiJ/PfpI [Mesorhizobium sp. BNC1] gb|ABG64316.1| ThiJ/PfpI [Chelativorans sp. BNC1] Length = 378 Score = 430 bits (1106), Expect = e-118, Method: Compositional matrix adjust. Identities = 214/378 (56%), Positives = 270/378 (71%) Query: 1 MTWRLLAWCGIAVAALVPIIGGIWLFTLPAASAFRVPPPIATQEHDAMLAALKPPKRARP 60 M+ + W G+AV L G W+F+LP+A+A PP+ +E +AMLAAL+ RP Sbjct: 1 MSKSIFVWGGVAVVLLGLAGFGAWVFSLPSATAAAEAPPVPQEETEAMLAALRHEGEDRP 60 Query: 61 LIAILGINDMTETTDYLMPYGILKRADVADVVTLATGPGPVALFPVLKVEPDATIAAFDA 120 ++A++G+ND TET DY+ GIL+RA++ADVV LATGPGPV L+P L+VEPDATIA FDA Sbjct: 61 VVAVIGLNDATETNDYITTTGILRRANIADVVMLATGPGPVQLYPALRVEPDATIAEFDA 120 Query: 121 AHPDGADYVIVPAMSRDDDPTVMQWIRQQAEKGAVIVAVCAGAKVLASTGQLDGRRATTH 180 HP+GADYVIVPAMSRDD+P V+ W++ Q+ KGA I+ VCAGAKV+ + G LDG+RATTH Sbjct: 121 EHPEGADYVIVPAMSRDDEPVVLAWLQDQSRKGAKILGVCAGAKVVGAAGLLDGKRATTH 180 Query: 181 WFYLKKWRNKHPEIRYVADRRIVVDHGVATTTGISASMPMSLTLIEAIAGRAKAEAVARE 240 W+Y + + P I YVADRR+V D V TTTGI+A+MPM LTLIEA+AG KAE VA + Sbjct: 181 WYYRGELLKRSPTIDYVADRRMVADGNVVTTTGITAAMPMMLTLIEALAGHEKAETVAHD 240 Query: 241 IGLPGWDARHDSNAFKFTRPFALTAIQNTLAFWNREQLGLALAPGVDEVSLALVADSWSR 300 +G+ WD RH S+AFK TRPFA T + N +FW + G+ L PG+DEVSLALVAD+WSR Sbjct: 241 LGVNSWDMRHASDAFKLTRPFATTVLANRASFWIHDIWGIELQPGMDEVSLALVADAWSR 300 Query: 301 TYRSHAVTFAATGDAVTTRNGLRVYPQVVASAWSADGLLPAVGTAPPAQALDRALAGIET 360 TYRS AVTFA + A+TT NG+RV P W D + P A+AL+R L I Sbjct: 301 TYRSGAVTFAESTSAITTVNGVRVLPDRAGDDWPEDRRISIFPDQPAAEALERTLDTITN 360 Query: 361 RYGRGTADFVAMQLEYPR 378 RYG TA+ VAMQLEYPR Sbjct: 361 RYGERTANVVAMQLEYPR 378