BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0167.0005.p (278 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001240103.1| LamB/YcsF family protein [Bradyrhizobium sp.... 467 e-129 ref|YP_001205789.1| LamB/YcsF family protein [Bradyrhizobium sp.... 448 e-124 ref|NP_771208.1| LamB/YcsF family protein [Bradyrhizobium japoni... 442 e-122 ref|YP_577300.1| LamB/YcsF family protein [Nitrobacter hamburgen... 432 e-119 ref|YP_001991939.1| LamB/YcsF family protein [Rhodopseudomonas p... 429 e-118 >ref|YP_001240103.1| LamB/YcsF family protein [Bradyrhizobium sp. BTAi1] gb|ABQ36197.1| putative lactam utilization protein [Bradyrhizobium sp. BTAi1] Length = 257 Score = 467 bits (1201), Expect = e-129, Method: Compositional matrix adjust. Identities = 227/256 (88%), Positives = 242/256 (94%) Query: 22 MTSTIDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVELAKARGVS 81 MTST+DLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVE+AK++GVS Sbjct: 1 MTSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKSKGVS 60 Query: 82 VGAHPGYRDLHGFGRRPMPGLTSTEIENLIAYQIGALQAIATAAGHKVTHVKAHGAISNV 141 VGAHPGYRDLHGFGRRP+PGLTS+EIENL+AYQIGALQAIATAAGHKVTHVKAHGA+SNV Sbjct: 61 VGAHPGYRDLHGFGRRPVPGLTSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNV 120 Query: 142 ACEDDMTARAIANAIKAVDPSLVFVVLANSKLVRAGEAAHLRMAHEVFADRAYEDDGNLV 201 ACEDDMTA AIA AIKAVDPSL+FVVLANSKLV AGE A+L MAHEVFADRAY+D+G LV Sbjct: 121 ACEDDMTANAIARAIKAVDPSLIFVVLANSKLVTAGEKANLSMAHEVFADRAYDDNGLLV 180 Query: 202 SRKKPGAVLHDPKAIADRVVRMVQDGAVVSVTGKVIKMQTDTVCIHGDTRGAVEIARGLR 261 SR KPGAVLHDPK IADRVVRMVQDGAVVSVTGKV+KM+TDTVCIHGDT GAVEIAR +R Sbjct: 181 SRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR 240 Query: 262 EALKQAGITVAPFKTA 277 AL AGI VAPFKTA Sbjct: 241 RALDAAGIEVAPFKTA 256 >ref|YP_001205789.1| LamB/YcsF family protein [Bradyrhizobium sp. ORS 278] emb|CAL77564.1| putative lactam utilization protein [Bradyrhizobium sp. ORS 278] Length = 257 Score = 448 bits (1152), Expect = e-124, Method: Compositional matrix adjust. Identities = 225/256 (87%), Positives = 241/256 (94%) Query: 22 MTSTIDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVELAKARGVS 81 MTST+DLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVE+AKA+GVS Sbjct: 1 MTSTVDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVEMAKAKGVS 60 Query: 82 VGAHPGYRDLHGFGRRPMPGLTSTEIENLIAYQIGALQAIATAAGHKVTHVKAHGAISNV 141 +GAHPGYRDLHGFGRRP+PGL S+EIENL+AYQIGALQAIATAAGHKVTHVKAHGA+SNV Sbjct: 61 IGAHPGYRDLHGFGRRPVPGLKSSEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNV 120 Query: 142 ACEDDMTARAIANAIKAVDPSLVFVVLANSKLVRAGEAAHLRMAHEVFADRAYEDDGNLV 201 ACEDDMTA AIA AIKAVDPSL+FVVLANSKLV AGE A+L MAHEVFADRAY+D+G LV Sbjct: 121 ACEDDMTANAIAKAIKAVDPSLIFVVLANSKLVTAGEKANLSMAHEVFADRAYDDNGLLV 180 Query: 202 SRKKPGAVLHDPKAIADRVVRMVQDGAVVSVTGKVIKMQTDTVCIHGDTRGAVEIARGLR 261 SR KPGAVLHDPK IADRVVRMVQDGAVVSVTGKV+KM+TDTVCIHGDT GAVEIAR +R Sbjct: 181 SRSKPGAVLHDPKQIADRVVRMVQDGAVVSVTGKVMKMRTDTVCIHGDTAGAVEIAREVR 240 Query: 262 EALKQAGITVAPFKTA 277 +AL AGI VAPFK A Sbjct: 241 QALDAAGIKVAPFKRA 256 >ref|NP_771208.1| LamB/YcsF family protein [Bradyrhizobium japonicum USDA 110] sp|Q89LH6.1|Y4568_BRAJA RecName: Full=UPF0271 protein blr4568 dbj|BAC49833.1| blr4568 [Bradyrhizobium japonicum USDA 110] Length = 256 Score = 442 bits (1136), Expect = e-122, Method: Compositional matrix adjust. Identities = 224/251 (89%), Positives = 236/251 (94%) Query: 25 TIDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVELAKARGVSVGA 84 TIDLNCDLGE FG WEMGNDAAMIELA+SVNVACGFHAGD DIMRRTVELAKARGVSVGA Sbjct: 3 TIDLNCDLGEGFGAWEMGNDAAMIELASSVNVACGFHAGDPDIMRRTVELAKARGVSVGA 62 Query: 85 HPGYRDLHGFGRRPMPGLTSTEIENLIAYQIGALQAIATAAGHKVTHVKAHGAISNVACE 144 HPGYRDLHGFGR P+ GL ++EIENL+AYQIGALQAIATAAGHKVTHVKAHGA+SNVACE Sbjct: 63 HPGYRDLHGFGRHPIAGLKASEIENLVAYQIGALQAIATAAGHKVTHVKAHGALSNVACE 122 Query: 145 DDMTARAIANAIKAVDPSLVFVVLANSKLVRAGEAAHLRMAHEVFADRAYEDDGNLVSRK 204 DDMTA+AIA IKAVDPSL+FVVLANSKLV+AGEAA+L M HEVFADRAYEDDGNLVSRK Sbjct: 123 DDMTAKAIAAGIKAVDPSLIFVVLANSKLVKAGEAANLPMVHEVFADRAYEDDGNLVSRK 182 Query: 205 KPGAVLHDPKAIADRVVRMVQDGAVVSVTGKVIKMQTDTVCIHGDTRGAVEIARGLREAL 264 KPGAVLHD KAIADRVVRMVQDGAVVSVTGKVIKM+TDTVCIHGDT GAVEIAR LR+AL Sbjct: 183 KPGAVLHDAKAIADRVVRMVQDGAVVSVTGKVIKMRTDTVCIHGDTHGAVEIARTLRQAL 242 Query: 265 KQAGITVAPFK 275 K AGI VAPFK Sbjct: 243 KDAGIEVAPFK 253 >ref|YP_577300.1| LamB/YcsF family protein [Nitrobacter hamburgensis X14] sp|Q1QLQ7.1|Y2042_NITHX RecName: Full=UPF0271 protein Nham_2042 gb|ABE62840.1| LamB/YcsF [Nitrobacter hamburgensis X14] Length = 255 Score = 432 bits (1110), Expect = e-119, Method: Compositional matrix adjust. Identities = 207/253 (81%), Positives = 230/253 (90%) Query: 25 TIDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVELAKARGVSVGA 84 TIDLNCDLGESFG W MGNDAAMI+LATSVN+ACGFHAGDAD M++TV+LAKARGVS+GA Sbjct: 2 TIDLNCDLGESFGVWSMGNDAAMIDLATSVNIACGFHAGDADTMKKTVDLAKARGVSIGA 61 Query: 85 HPGYRDLHGFGRRPMPGLTSTEIENLIAYQIGALQAIATAAGHKVTHVKAHGAISNVACE 144 HPGYRDLHGFGRRP+ GL+S+E+ENL+AYQIGALQAIAT AGHKVTHVKAHGA+SN+AC+ Sbjct: 62 HPGYRDLHGFGRRPVVGLSSSELENLVAYQIGALQAIATMAGHKVTHVKAHGALSNIACD 121 Query: 145 DDMTARAIANAIKAVDPSLVFVVLANSKLVRAGEAAHLRMAHEVFADRAYEDDGNLVSRK 204 DDMTARAIA+AIKAVDP LVFVVLANS+LV AGEA L M HEVFADRAYEDDG+LVSR+ Sbjct: 122 DDMTARAIASAIKAVDPDLVFVVLANSRLVAAGEALGLSMVHEVFADRAYEDDGSLVSRR 181 Query: 205 KPGAVLHDPKAIADRVVRMVQDGAVVSVTGKVIKMQTDTVCIHGDTRGAVEIARGLREAL 264 KPGAVLHD AIA RVV+M+Q G VVS+TGK IKM+ DTVCIHGDT GAVEIAR LR+AL Sbjct: 182 KPGAVLHDADAIAQRVVKMIQSGEVVSITGKTIKMRMDTVCIHGDTPGAVEIARALRKAL 241 Query: 265 KQAGITVAPFKTA 277 K GI VAPFKTA Sbjct: 242 KDNGIAVAPFKTA 254 >ref|YP_001991939.1| LamB/YcsF family protein [Rhodopseudomonas palustris TIE-1] sp|B3QJF8.1|Y2956_RHOPT RecName: Full=UPF0271 protein Rpal_2956 gb|ACF01464.1| LamB/YcsF family protein [Rhodopseudomonas palustris TIE-1] Length = 254 Score = 429 bits (1102), Expect = e-118, Method: Compositional matrix adjust. Identities = 205/249 (82%), Positives = 230/249 (92%) Query: 26 IDLNCDLGESFGPWEMGNDAAMIELATSVNVACGFHAGDADIMRRTVELAKARGVSVGAH 85 IDLNCDLGE FG W+MG+DAAM+++ATSVN+ACGFHAGD DIM TV+LAK GV++GAH Sbjct: 3 IDLNCDLGEGFGVWQMGDDAAMMQIATSVNIACGFHAGDPDIMHATVKLAKQNGVAIGAH 62 Query: 86 PGYRDLHGFGRRPMPGLTSTEIENLIAYQIGALQAIATAAGHKVTHVKAHGAISNVACED 145 PG+RDLHGFGRRP+PG+TS EIENL+AYQIGALQA+A AGHKVTHVKAHGA+SNVACED Sbjct: 63 PGFRDLHGFGRRPVPGITSAEIENLVAYQIGALQAVAALAGHKVTHVKAHGALSNVACED 122 Query: 146 DMTARAIANAIKAVDPSLVFVVLANSKLVRAGEAAHLRMAHEVFADRAYEDDGNLVSRKK 205 DMTARAIA+AIKAVDPSLVFVVLANSKL+ AGEAA L +AHEVFADRAYEDDGNLVSRKK Sbjct: 123 DMTARAIASAIKAVDPSLVFVVLANSKLMLAGEAAGLPLAHEVFADRAYEDDGNLVSRKK 182 Query: 206 PGAVLHDPKAIADRVVRMVQDGAVVSVTGKVIKMQTDTVCIHGDTRGAVEIARGLREALK 265 PGAVLHDP IA+RV+RM QDGAVVSVTGKVIKM+TDTVCIHGDT+GAVEIARG+R L+ Sbjct: 183 PGAVLHDPNEIAERVLRMAQDGAVVSVTGKVIKMRTDTVCIHGDTKGAVEIARGVRRKLE 242 Query: 266 QAGITVAPF 274 +GITVAPF Sbjct: 243 ASGITVAPF 251