BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0167.0001.p (541 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773335.1| GMC type oxidoreductase [Bradyrhizobium japonic... 971 0.0 ref|YP_001242097.1| putative choline (or alcohol) dehydrogenase ... 938 0.0 ref|YP_001207645.1| putative choline (or alcohol) dehydrogenase ... 920 0.0 ref|ZP_02187562.1| GMC type oxidoreductase [alpha proteobacteriu... 784 0.0 ref|XP_003390114.1| PREDICTED: choline dehydrogenase-like [Amphi... 639 0.0 >ref|NP_773335.1| GMC type oxidoreductase [Bradyrhizobium japonicum USDA 110] dbj|BAC51960.1| GMC type oxidoreductase [Bradyrhizobium japonicum USDA 110] Length = 548 Score = 971 bits (2510), Expect = 0.0, Method: Compositional matrix adjust. Identities = 459/541 (84%), Positives = 496/541 (91%), Gaps = 1/541 (0%) Query: 1 VIIGAGSAGSVLTNRLSEDAGTRVCVLEAGPSDWHPYIHLPAGFIKTFHMKSVNWAYQQE 60 VI+GAGSAG VL NRLSED VCVLEAGPSDWHPYIHLPAGFIKTFHMKS+NWAYQQE Sbjct: 7 VIVGAGSAGCVLANRLSEDPNVSVCVLEAGPSDWHPYIHLPAGFIKTFHMKSINWAYQQE 66 Query: 61 VGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRQDFDTWAQLGNRGWGYPDVLPYFRRM 120 GPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQR DFDTWAQ+GNRGWGY DVLPYF+R+ Sbjct: 67 PGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRMDFDTWAQMGNRGWGYADVLPYFKRL 126 Query: 121 ERRVGEGDDTYRGRDGNLTVTTMDWQDPLCEAFMAGAVSLGIPRNPDYNGQIQEGVSYCQ 180 E+RVGEG+DTYRGRDGNL VTTMDW+DPLCEAFM GAVSLGIPRNPDYNG QEGVSYCQ Sbjct: 127 EKRVGEGEDTYRGRDGNLIVTTMDWRDPLCEAFMEGAVSLGIPRNPDYNGAKQEGVSYCQ 186 Query: 181 RTILNGRRVSAATAFLHPARRRPNVDVRTHAHVTGIIFEGKRAVGVRYNRGGKHGDPLEI 240 RTI NG RVS +TAFL PA +RPNV V THAH T IIFEGKRAVGVRY +GG+ G P+E+ Sbjct: 187 RTINNGLRVSGSTAFLKPAMKRPNVHVHTHAHATEIIFEGKRAVGVRYTKGGRGGTPVEV 246 Query: 241 RATKEVILSGGAYNSPQLLQLSGVGAPELLQAHGIEVRHALPGVGEGLQDHYAPRSVARV 300 RA KEVILSGG YNSPQLLQLSG+G+P+LL AHGI+VRHALP VGEGLQDHYAPR+VARV Sbjct: 247 RANKEVILSGGTYNSPQLLQLSGIGSPDLLGAHGIQVRHALP-VGEGLQDHYAPRTVARV 305 Query: 301 KNIRTINELRRGFSLWGEAIKWATTRRGLLSLSPTMVYCFWHSGETTESSDLQLTFTPAS 360 K+I+TINELRRGFSLW EA+KWAT RRGLLSLSPTMVYCFWHSGE+ ESSDLQLTFTPAS Sbjct: 306 KDIKTINELRRGFSLWIEALKWATARRGLLSLSPTMVYCFWHSGESAESSDLQLTFTPAS 365 Query: 361 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLAEEIDRRVVVAG 420 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYL E+DRRV+V G Sbjct: 366 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLDAELDRRVIVGG 425 Query: 421 MKLARRLLASEPLSPYYAYEDFPGPKVTSDDELLAAATQRGTTTFHPGCTCRMGPADAPW 480 MKLARRLL S PLSPYYAYEDFPGP + +DDE LAAAT+RGTTTFHPGCTCRMGPAD+ W Sbjct: 426 MKLARRLLKSSPLSPYYAYEDFPGPNINTDDEFLAAATERGTTTFHPGCTCRMGPADSTW 485 Query: 481 AVVDDQLRVHGMEGLRVIDASIMPRMISANLNASTLMIADKASDMIRGKAPEAAAKLPEY 540 AVVDDQLRVHG+EGLRVIDAS+MPRMISANLNAST+MIAD+ASD+IRGK P AA++P+ Sbjct: 486 AVVDDQLRVHGLEGLRVIDASVMPRMISANLNASTMMIADRASDLIRGKVPMEAARIPDA 545 Query: 541 A 541 A Sbjct: 546 A 546 >ref|YP_001242097.1| putative choline (or alcohol) dehydrogenase [Bradyrhizobium sp. BTAi1] gb|ABQ38191.1| putative choline (or alcohol) dehydrogenase [Bradyrhizobium sp. BTAi1] Length = 544 Score = 938 bits (2425), Expect = 0.0, Method: Compositional matrix adjust. Identities = 441/530 (83%), Positives = 482/530 (90%) Query: 1 VIIGAGSAGSVLTNRLSEDAGTRVCVLEAGPSDWHPYIHLPAGFIKTFHMKSVNWAYQQE 60 VI+GAGSAG VL +RLSED VCVLEAGP DWHPYIHLPAGFIKTF+MKS+NW YQQE Sbjct: 7 VIVGAGSAGCVLASRLSEDPSVTVCVLEAGPRDWHPYIHLPAGFIKTFYMKSINWGYQQE 66 Query: 61 VGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRQDFDTWAQLGNRGWGYPDVLPYFRRM 120 GPYT GRSIYAPRGKTLGGSSSINGH+YNRGQRQDFDTWAQ+GNRGW Y DVL +F+RM Sbjct: 67 PGPYTNGRSIYAPRGKTLGGSSSINGHVYNRGQRQDFDTWAQMGNRGWSYSDVLSHFKRM 126 Query: 121 ERRVGEGDDTYRGRDGNLTVTTMDWQDPLCEAFMAGAVSLGIPRNPDYNGQIQEGVSYCQ 180 E+R+G GD+ YRGRDG+L VTTM+W+D LCEAFM GAVSLGIPRNPDYNG IQEGVSY Q Sbjct: 127 EKRIGAGDEQYRGRDGSLHVTTMEWKDTLCEAFMDGAVSLGIPRNPDYNGAIQEGVSYVQ 186 Query: 181 RTILNGRRVSAATAFLHPARRRPNVDVRTHAHVTGIIFEGKRAVGVRYNRGGKHGDPLEI 240 RTI NGRRVS+ATAFL PA +RPNV++RTHAH TG++ EGKRAVGVRY+RGG+ G P+E+ Sbjct: 187 RTIQNGRRVSSATAFLRPASKRPNVEIRTHAHATGVMLEGKRAVGVRYSRGGRGGVPVEV 246 Query: 241 RATKEVILSGGAYNSPQLLQLSGVGAPELLQAHGIEVRHALPGVGEGLQDHYAPRSVARV 300 RA KEVIL GGAYNSPQLLQLSG+GAPELLQ HGIEVRHAL VGEGLQDHYAPR+VARV Sbjct: 247 RARKEVILCGGAYNSPQLLQLSGIGAPELLQEHGIEVRHALRSVGEGLQDHYAPRTVARV 306 Query: 301 KNIRTINELRRGFSLWGEAIKWATTRRGLLSLSPTMVYCFWHSGETTESSDLQLTFTPAS 360 KNI+TINEL RG +LWGEA+KWA TRRG+LSLSPTMVYCFWHSGET ESSDLQLTFTPAS Sbjct: 307 KNIKTINELARGLNLWGEALKWALTRRGILSLSPTMVYCFWHSGETAESSDLQLTFTPAS 366 Query: 361 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLAEEIDRRVVVAG 420 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFA PIIQTNYL E+DRRV+VAG Sbjct: 367 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAQPIIQTNYLTAELDRRVIVAG 426 Query: 421 MKLARRLLASEPLSPYYAYEDFPGPKVTSDDELLAAATQRGTTTFHPGCTCRMGPADAPW 480 MKLARRLLAS PL+PYYAYEDFPGPKV SDDELLAAA QR TTTFHPGC+CRMGPA++ W Sbjct: 427 MKLARRLLASAPLAPYYAYEDFPGPKVQSDDELLAAAIQRATTTFHPGCSCRMGPAESTW 486 Query: 481 AVVDDQLRVHGMEGLRVIDASIMPRMISANLNASTLMIADKASDMIRGKA 530 A VDDQLRVHG++GLRV DASIMPRMISANLNA+TLMI DKA+D+I GKA Sbjct: 487 ATVDDQLRVHGLQGLRVADASIMPRMISANLNAATLMIGDKAADLILGKA 536 >ref|YP_001207645.1| putative choline (or alcohol) dehydrogenase [Bradyrhizobium sp. ORS 278] emb|CAL79428.1| putative choline (or alcohol) dehydrogenase [Bradyrhizobium sp. ORS 278] Length = 544 Score = 920 bits (2377), Expect = 0.0, Method: Compositional matrix adjust. Identities = 439/529 (82%), Positives = 481/529 (90%) Query: 1 VIIGAGSAGSVLTNRLSEDAGTRVCVLEAGPSDWHPYIHLPAGFIKTFHMKSVNWAYQQE 60 VI+GAGSAG V+ +RLSED VCVLEAGP DWHPYIHLPAGFIKTF+MKS+NW YQQE Sbjct: 7 VIVGAGSAGCVIASRLSEDPSVTVCVLEAGPRDWHPYIHLPAGFIKTFYMKSINWGYQQE 66 Query: 61 VGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRQDFDTWAQLGNRGWGYPDVLPYFRRM 120 GPYT GRSIYAPRGKTLGGSSSINGH+YNRGQ QDFDTWAQLGNRGW Y DVLP+FRRM Sbjct: 67 PGPYTAGRSIYAPRGKTLGGSSSINGHVYNRGQSQDFDTWAQLGNRGWSYSDVLPHFRRM 126 Query: 121 ERRVGEGDDTYRGRDGNLTVTTMDWQDPLCEAFMAGAVSLGIPRNPDYNGQIQEGVSYCQ 180 E+R+G GD+ YRGRDG+L VTTM+W+D LCEAFM GAVSLGIPRNPDYNG IQEGVSY Q Sbjct: 127 EKRIGAGDEQYRGRDGSLHVTTMEWKDTLCEAFMDGAVSLGIPRNPDYNGAIQEGVSYVQ 186 Query: 181 RTILNGRRVSAATAFLHPARRRPNVDVRTHAHVTGIIFEGKRAVGVRYNRGGKHGDPLEI 240 RTI NGRRVS+ATAFL PA +RPNV++RTHAH T I+ EGKRAVGVRY+RGG+ G P+E+ Sbjct: 187 RTIQNGRRVSSATAFLKPASKRPNVEIRTHAHATSIMLEGKRAVGVRYHRGGRGGVPVEV 246 Query: 241 RATKEVILSGGAYNSPQLLQLSGVGAPELLQAHGIEVRHALPGVGEGLQDHYAPRSVARV 300 RA KEVILSGG YNSPQLLQLSG+GAPELLQ HGIEVRHAL VGEGLQDHYAPR+VARV Sbjct: 247 RARKEVILSGGTYNSPQLLQLSGIGAPELLQEHGIEVRHALKSVGEGLQDHYAPRTVARV 306 Query: 301 KNIRTINELRRGFSLWGEAIKWATTRRGLLSLSPTMVYCFWHSGETTESSDLQLTFTPAS 360 KNI+TINEL RG +LWGEA+KWA TR+G+LSLSPTMVYCFWHSGET ESSDLQLTFTPAS Sbjct: 307 KNIKTINELARGLNLWGEALKWAVTRKGILSLSPTMVYCFWHSGETAESSDLQLTFTPAS 366 Query: 361 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLAEEIDRRVVVAG 420 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPP+IQTNYL E+DRRV+VAG Sbjct: 367 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPLIQTNYLTAELDRRVIVAG 426 Query: 421 MKLARRLLASEPLSPYYAYEDFPGPKVTSDDELLAAATQRGTTTFHPGCTCRMGPADAPW 480 MKLARRLLAS PL+PYYAYEDFPGPKV SDDE LAAATQR TTTFHPGCTCRMGPA++ W Sbjct: 427 MKLARRLLASAPLAPYYAYEDFPGPKVNSDDEFLAAATQRATTTFHPGCTCRMGPAESTW 486 Query: 481 AVVDDQLRVHGMEGLRVIDASIMPRMISANLNASTLMIADKASDMIRGK 529 A VDDQLRVHG++GLR+ DASIMPRMISANLNA+TLMI D+A+D+I GK Sbjct: 487 ATVDDQLRVHGLQGLRIADASIMPRMISANLNAATLMIGDRAADLILGK 535 >ref|ZP_02187562.1| GMC type oxidoreductase [alpha proteobacterium BAL199] gb|EDP65904.1| GMC type oxidoreductase [alpha proteobacterium BAL199] Length = 545 Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust. Identities = 375/539 (69%), Positives = 435/539 (80%) Query: 1 VIIGAGSAGSVLTNRLSEDAGTRVCVLEAGPSDWHPYIHLPAGFIKTFHMKSVNWAYQQE 60 +I+GAGSAGSVL NRL+ED VCVLEAGPSDWHP+IH+PAGF+KT +VNW Y E Sbjct: 7 IIVGAGSAGSVLANRLTEDGTATVCVLEAGPSDWHPFIHIPAGFMKTMVDPAVNWLYDME 66 Query: 61 VGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRQDFDTWAQLGNRGWGYPDVLPYFRRM 120 +TGGR I APRGKTLGGSSSINGHIYNRGQR DFD WAQ GN GWGY DVLPYFRR Sbjct: 67 PSEWTGGRRIKAPRGKTLGGSSSINGHIYNRGQRMDFDGWAQRGNHGWGYADVLPYFRRS 126 Query: 121 ERRVGEGDDTYRGRDGNLTVTTMDWQDPLCEAFMAGAVSLGIPRNPDYNGQIQEGVSYCQ 180 E+R G GDDT+RGR+GNL VT +DW+ PLCEAF+ GA +LGIPRNPDYNG IQEGVSY Q Sbjct: 127 EKREGAGDDTFRGRNGNLVVTDIDWRHPLCEAFIEGATTLGIPRNPDYNGAIQEGVSYAQ 186 Query: 181 RTILNGRRVSAATAFLHPARRRPNVDVRTHAHVTGIIFEGKRAVGVRYNRGGKHGDPLEI 240 RTI GRR+SAA A+LHPA +RPN+ V T AH T ++ EGKRA GVRYN+GG+HG P E+ Sbjct: 187 RTISKGRRMSAARAYLHPAMKRPNLTVITDAHATSLMLEGKRATGVRYNKGGRHGIPSEV 246 Query: 241 RATKEVILSGGAYNSPQLLQLSGVGAPELLQAHGIEVRHALPGVGEGLQDHYAPRSVARV 300 A +EVIL+GG YNSPQLLQLSG+G L+A GI V H LPGVGE L+DHYAPR VARV Sbjct: 247 TARREVILAGGTYNSPQLLQLSGIGPAAHLKALGIPVLHDLPGVGENLRDHYAPRFVARV 306 Query: 301 KNIRTINELRRGFSLWGEAIKWATTRRGLLSLSPTMVYCFWHSGETTESSDLQLTFTPAS 360 K TINE RG L G+ ++W TR+G+LSLSPT+VYCFWHS E +SD+Q TFTPAS Sbjct: 307 KGTDTINEEVRGTRLVGQVLRWLATRKGVLSLSPTLVYCFWHSDEAARNSDVQFTFTPAS 366 Query: 361 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLAEEIDRRVVVAG 420 YKEGVQ +L+D PGMTVASWQQRP+S+GYVR R+ADPF P+IQ NYLAEE DR+V++ Sbjct: 367 YKEGVQSRLDDHPGMTVASWQQRPDSKGYVRARNADPFEAPVIQPNYLAEESDRQVLLKA 426 Query: 421 MKLARRLLASEPLSPYYAYEDFPGPKVTSDDELLAAATQRGTTTFHPGCTCRMGPADAPW 480 MKLARRLLA++PL PYY E++PGP V +DDELLAAA +RGTTTFHP +CRMGP P Sbjct: 427 MKLARRLLATKPLEPYYDSEEYPGPNVQTDDELLAAARERGTTTFHPMGSCRMGPETDPT 486 Query: 481 AVVDDQLRVHGMEGLRVIDASIMPRMISANLNASTLMIADKASDMIRGKAPEAAAKLPE 539 AVVDDQLRV GMEGLRVIDAS+MP M+SANLNAS +MIA+KASD+IRG+ A LP+ Sbjct: 487 AVVDDQLRVRGMEGLRVIDASVMPTMLSANLNASVIMIAEKASDIIRGRPALEATILPD 545 >ref|XP_003390114.1| PREDICTED: choline dehydrogenase-like [Amphimedon queenslandica] Length = 543 Score = 639 bits (1647), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/537 (60%), Positives = 392/537 (72%), Gaps = 3/537 (0%) Query: 1 VIIGAGSAGSVLTNRLSEDAGTRVCVLEAGPSDWHPYIHLPAGFIKTFHMKSVNWAYQQE 60 VI+G G+AG+VL NRLS D RVC LEAG D +P+IH+PAGF+KT SVNW Y+ E Sbjct: 10 VIVGTGTAGAVLVNRLSADGRFRVCALEAGGRDSNPFIHIPAGFMKTMTSPSVNWLYEAE 69 Query: 61 VGPYTGGRSIYAPRGKTLGGSSSINGHIYNRGQRQDFDTWAQLGNRGWGYPDVLPYFRRM 120 GP T GR I PRGKT GGSSSINGHIYNRGQR DFD WAQ GNRGWGY DVLPYFRR Sbjct: 70 PGPGTAGRRIAHPRGKTFGGSSSINGHIYNRGQRADFDHWAQCGNRGWGYADVLPYFRRS 129 Query: 121 ERRVGEGDDTYRGRDGNLTVTTMDWQDPLCEAFMAGAVSLGIPRNPDYNGQIQEGVSYCQ 180 E R+G+GDD +RGR+G V + W +PLC+AF+AGA SLGIPRNPDYNG QEGV Y Q Sbjct: 130 EGRIGDGDDRFRGREGEFKVEDLHWGNPLCDAFIAGAESLGIPRNPDYNGAKQEGVGYFQ 189 Query: 181 RTILNGRRVSAATAFLHPARRRPNVDVRTHAHVTGIIFEGKRAVGVRYNRGGKHGDPLEI 240 R++ RR+SAA A L PA RRPNV+VR HAH + I+F+G A GV Y R G+ E+ Sbjct: 190 RSVHRARRMSAARAHLRPAMRRPNVEVRPHAHASRIVFDGGCACGVEYLRDGER---YEV 246 Query: 241 RATKEVILSGGAYNSPQLLQLSGVGAPELLQAHGIEVRHALPGVGEGLQDHYAPRSVARV 300 RAT+EVI++GGA NSPQLLQ+SG+G P LL + V ALPGVGE L+DHYA R+ +V Sbjct: 247 RATREVIIAGGAVNSPQLLQISGIGPPSLLNDLQVPVYLALPGVGENLRDHYAVRTAFKV 306 Query: 301 KNIRTINELRRGFSLWGEAIKWATTRRGLLSLSPTMVYCFWHSGETTESSDLQLTFTPAS 360 + RTINEL RG+ L E K+ +G+L+L PT+V CFW S + E+ DLQLTFTPAS Sbjct: 307 QGTRTINELARGWRLGLEIAKYFLAGKGILTLQPTLVGCFWKSDDALENGDLQLTFTPAS 366 Query: 361 YKEGVQGQLEDEPGMTVASWQQRPESRGYVRIRSADPFAPPIIQTNYLAEEIDRRVVVAG 420 Y++GVQ LE EPG T+A WQQRP+S G+VR R+ +P P+IQ NYL E DR+V+V G Sbjct: 367 YRQGVQSTLESEPGATIAVWQQRPQSSGFVRARTPNPLDKPLIQPNYLTAEYDRQVIVKG 426 Query: 421 MKLARRLLASEPLSPYYAYEDFPGPKVTSDDELLAAATQRGTTTFHPGCTCRMGPADAPW 480 ++LA+RL+ + L P++ +E PG ++ DDELL GTT FH +CRMGPA P Sbjct: 427 VRLAKRLMRTAALRPWFKHEALPGEEIERDDELLDFVFGIGTTAFHLMGSCRMGPASDPM 486 Query: 481 AVVDDQLRVHGMEGLRVIDASIMPRMISANLNASTLMIADKASDMIRGKAPEAAAKL 537 AVVDD+LRVHG+EGLRV DASIMP M SAN NASTLMIA+KASD+I + P AA L Sbjct: 487 AVVDDRLRVHGVEGLRVADASIMPMMPSANTNASTLMIAEKASDLILDRTPPEAAAL 543