BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0165.0031.p         (132 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_774393.1| hypothetical protein blr7753 [Bradyrhizobium ja...   205   2e-51
ref|YP_578606.1| hypothetical protein Nham_3416 [Nitrobacter ham...   198   3e-49
ref|ZP_01046869.1| hypothetical protein NB311A_16834 [Nitrobacte...   197   4e-49
ref|YP_317541.1| hypothetical protein Nwi_0927 [Nitrobacter wino...   194   5e-48
ref|YP_001208107.1| hypothetical protein BRADO6250 [Bradyrhizobi...   185   2e-45

>ref|NP_774393.1| hypothetical protein blr7753 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53018.1| blr7753 [Bradyrhizobium japonicum USDA 110]
          Length = 132

 Score =  205 bits (522), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 110/130 (84%)

Query: 1   MTIAEWCVFGTLMLSLLTIVSVKWTGFRSFDNARPRDPDFYDDPIRSRALGAHQNGIEAF 60
           MT+AEWCVFG L+L L TI S+KW  FR FDN+RPRDP FY+D I  RALGAHQNGIE F
Sbjct: 1   MTLAEWCVFGALLLYLATIASIKWIRFRGFDNSRPRDPAFYEDAIAQRALGAHQNGIETF 60

Query: 61  PFFAFAVLLAEFRVGPLRLIDELAVLFLIVRIAYVFTYIGNRPTLRSILWSIGFAINIAI 120
           PFFAFAVLLAEFR  P RLIDELAVLFLIVRIAYV TY+GNRPTLRSILWSIGFAIN+ I
Sbjct: 61  PFFAFAVLLAEFRDSPQRLIDELAVLFLIVRIAYVLTYLGNRPTLRSILWSIGFAINLVI 120

Query: 121 FLLPAIRGYL 130
           F +P ++ +L
Sbjct: 121 FFMPMLKRFL 130


>ref|YP_578606.1| hypothetical protein Nham_3416 [Nitrobacter hamburgensis X14]
 gb|ABE64146.1| conserved hypothetical protein [Nitrobacter hamburgensis X14]
          Length = 131

 Score =  198 bits (503), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 99/130 (76%), Positives = 110/130 (84%)

Query: 1   MTIAEWCVFGTLMLSLLTIVSVKWTGFRSFDNARPRDPDFYDDPIRSRALGAHQNGIEAF 60
           MT+AEWCVFG ++L LLTIV  K  G   FDNARPRDP FY++P+R+RALGAH NGIEAF
Sbjct: 1   MTVAEWCVFGAVILYLLTIVPFKALGSPRFDNARPRDPGFYEEPLRARALGAHLNGIEAF 60

Query: 61  PFFAFAVLLAEFRVGPLRLIDELAVLFLIVRIAYVFTYIGNRPTLRSILWSIGFAINIAI 120
           PFFA AVLLAEFRV P  LIDELA+LFLIVR AYV TY+G+RPTLRSILWSIGFAIN AI
Sbjct: 61  PFFAAAVLLAEFRVSPQHLIDELAILFLIVRAAYVLTYLGDRPTLRSILWSIGFAINTAI 120

Query: 121 FLLPAIRGYL 130
           F LPAIR +L
Sbjct: 121 FFLPAIRHWL 130


>ref|ZP_01046869.1| hypothetical protein NB311A_16834 [Nitrobacter sp. Nb-311A]
 gb|EAQ35178.1| hypothetical protein NB311A_16834 [Nitrobacter sp. Nb-311A]
          Length = 132

 Score =  197 bits (502), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 101/132 (76%), Positives = 109/132 (82%)

Query: 1   MTIAEWCVFGTLMLSLLTIVSVKWTGFRSFDNARPRDPDFYDDPIRSRALGAHQNGIEAF 60
           MT+AEWCVFG ++L LLTIV  K  G   FDNARPRDP FYD P+R+RALGAH NGIEAF
Sbjct: 1   MTVAEWCVFGAVILYLLTIVPFKALGSPRFDNARPRDPGFYDHPLRARALGAHLNGIEAF 60

Query: 61  PFFAFAVLLAEFRVGPLRLIDELAVLFLIVRIAYVFTYIGNRPTLRSILWSIGFAINIAI 120
           PFFA AVLLAEFR  P RLIDELA+LFLIVR AYV TYIG+RPTLRSILW IGFAIN AI
Sbjct: 61  PFFAAAVLLAEFRDAPQRLIDELAILFLIVRAAYVVTYIGDRPTLRSILWGIGFAINTAI 120

Query: 121 FLLPAIRGYLTS 132
           F LPAIR +L S
Sbjct: 121 FFLPAIRHWLPS 132


>ref|YP_317541.1| hypothetical protein Nwi_0927 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04189.1| conserved hypothetical protein [Nitrobacter winogradskyi Nb-255]
          Length = 132

 Score =  194 bits (492), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 98/132 (74%), Positives = 108/132 (81%)

Query: 1   MTIAEWCVFGTLMLSLLTIVSVKWTGFRSFDNARPRDPDFYDDPIRSRALGAHQNGIEAF 60
           MTIAEWCVFG ++L LLTIV  K      FDNARPRDP+FY DP+R+RALGAH NGIEAF
Sbjct: 1   MTIAEWCVFGAVILYLLTIVPFKALRLPRFDNARPRDPEFYGDPLRARALGAHLNGIEAF 60

Query: 61  PFFAFAVLLAEFRVGPLRLIDELAVLFLIVRIAYVFTYIGNRPTLRSILWSIGFAINIAI 120
           PFFA AVLLAEFR  P RLIDELA+L+LIVR AYV TYIG+RPTLRSILW +GFAIN  I
Sbjct: 61  PFFAAAVLLAEFRDAPQRLIDELAILYLIVRAAYVVTYIGDRPTLRSILWGVGFAINTTI 120

Query: 121 FLLPAIRGYLTS 132
           F LPAIR +L S
Sbjct: 121 FFLPAIRHWLPS 132


>ref|YP_001208107.1| hypothetical protein BRADO6250 [Bradyrhizobium sp. ORS 278]
 emb|CAL79892.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 135

 Score =  185 bits (469), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 94/133 (70%), Positives = 105/133 (78%), Gaps = 3/133 (2%)

Query: 1   MTIAEWCVFGTLMLSLLTIVSVKW---TGFRSFDNARPRDPDFYDDPIRSRALGAHQNGI 57
           MTIAE C+F ++ML LLTIV  KW    G   +DNARPRDP FYD  IR RALGAHQNGI
Sbjct: 1   MTIAELCIFASVMLYLLTIVPAKWISVDGAGRYDNARPRDPAFYDGGIRERALGAHQNGI 60

Query: 58  EAFPFFAFAVLLAEFRVGPLRLIDELAVLFLIVRIAYVFTYIGNRPTLRSILWSIGFAIN 117
           EAFPFFA AVLLAEFR  P  LI+EL+VLFLIVR AYV TYIGNRP+LR+ILW+IGF I 
Sbjct: 61  EAFPFFAAAVLLAEFRSAPQNLINELSVLFLIVRTAYVLTYIGNRPSLRTILWTIGFLIT 120

Query: 118 IAIFLLPAIRGYL 130
           +AIF LP +R YL
Sbjct: 121 VAIFFLPLLRHYL 133