BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0030.p (373 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_534682.1| high-affinity nickel-transporter [Rhodopseudomo... 456 e-126 ref|YP_488137.1| high-affinity nickel-transporter [Rhodopseudomo... 445 e-123 ref|YP_567999.1| high-affinity nickel-transporter [Rhodopseudomo... 436 e-120 ref|NP_946227.1| high-affinity nickel-transporter [Rhodopseudomo... 435 e-120 ref|YP_783705.1| high-affinity nickel-transporter [Rhodopseudomo... 428 e-118 >ref|YP_534682.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisB18] gb|ABD90363.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisB18] Length = 390 Score = 456 bits (1172), Expect = e-126, Method: Compositional matrix adjust. Identities = 267/394 (67%), Positives = 299/394 (75%), Gaps = 34/394 (8%) Query: 5 VSRMTRGLAVSAAVLAAFALLDGAVHALLAQNPFGAPRA-AEPQ-GGLVGWLLAKQSEFY 62 ++ + R L + AAVL LLD A+ LAQNPFG PR A PQ GG+VGWLL +QS FY Sbjct: 6 IAAVARTLLICAAVLTLAPLLDAALSHALAQNPFGGPRPPAAPQVGGVVGWLLEQQSLFY 65 Query: 63 REISQTIRAAKSDGSAVWTLLVISFAYGIFHAAGPGHGKAVISSYMVANRETARRGIVLS 122 R++S TIRAAKSDGSAVWTLL ISFAYGIFHAAGPGHGKAVISSY+VAN ETARRGIVLS Sbjct: 66 RQMSATIRAAKSDGSAVWTLLSISFAYGIFHAAGPGHGKAVISSYLVANEETARRGIVLS 125 Query: 123 FASALMQSVVAVLIVGICAWLLNATAKTMCGAEKAVEIASYALIAAFGARLVWVKGGGFF 182 F SAL+Q++VAVL+VGICAWLLNATAKTMCGAE+ +EI SYALIAAFGARLVW KGGGFF Sbjct: 126 FVSALLQALVAVLVVGICAWLLNATAKTMCGAERVIEIVSYALIAAFGARLVWSKGGGFF 185 Query: 183 RAL----QAPGPALAMAGAHQHDHDHHDHDHHDHGHDHHHRHAHDDHGHHHDHGPEHGHD 238 RAL Q P A A+A A HDH H H HD H HAH H PE H Sbjct: 186 RALSAARQRPADAFALAPAAAQHHDH--HQPHAEPHDAAHPHAHQGH-------PEVAHS 236 Query: 239 -------------------AQHVHDEHCGHSHGPTPAELAGPGGWRRGLGAILTVGIRPC 279 A HVHD HCGH+HGP PA+LAGPGGWRRG GAIL VG+RPC Sbjct: 237 HDHDHLPRHDDHHHHDHGGAAHVHDGHCGHAHGPEPADLAGPGGWRRGFGAILAVGLRPC 296 Query: 280 SGAILVLVFALAQGLFWAGIAATFVMGLGTAITVAAIALVAVSARGVAERLSAARDGGGM 339 SGAILVLVFALAQG+FWAG+AATF MG+GTAITVA IA +AVSA+G+A RL+A R+ GG Sbjct: 297 SGAILVLVFALAQGMFWAGVAATFAMGVGTAITVATIATLAVSAKGLARRLAAGREAGGA 356 Query: 340 VIMRGLEFAAAGLVLLFGLGLLFGYVAAERATCL 373 +IMRG+EF+AAGLVLLFGLGLL GY+AAER TCL Sbjct: 357 LIMRGVEFSAAGLVLLFGLGLLLGYMAAERVTCL 390 >ref|YP_488137.1| high-affinity nickel-transporter [Rhodopseudomonas palustris HaA2] gb|ABD09226.1| High-affinity nickel-transporter [Rhodopseudomonas palustris HaA2] Length = 398 Score = 445 bits (1145), Expect = e-123, Method: Compositional matrix adjust. Identities = 264/378 (69%), Positives = 290/378 (76%), Gaps = 36/378 (9%) Query: 26 DGAVHALLAQNPFGAPRAA-EPQ-GGLVGWLLAKQSEFYREISQTIRAAKSDGSAVWTLL 83 D +H+ LAQNPFGAP+AA EPQ GG++GWLLA+QS FYR++S TIRAAK+DGSAVWTLL Sbjct: 27 DATLHSALAQNPFGAPKAAAEPQAGGIIGWLLAQQSAFYRQMSATIRAAKADGSAVWTLL 86 Query: 84 VISFAYGIFHAAGPGHGKAVISSYMVANRETARRGIVLSFASALMQSVVAVLIVGICAWL 143 ISFAYGIFHAAGPGHGKAVISSYM+AN ETARRGIVLSF SALMQ++VAVLIVGICAWL Sbjct: 87 GISFAYGIFHAAGPGHGKAVISSYMIANEETARRGIVLSFVSALMQALVAVLIVGICAWL 146 Query: 144 LNATAKTMCGAEKAVEIASYALIAAFGARLVWVKGGGFFRALQ----APG------PALA 193 LNATAKTMC AE+A+EI SYALIA FGARLVW KGGGFFRALQ PG PA+A Sbjct: 147 LNATAKTMCSAERAIEIGSYALIALFGARLVWSKGGGFFRALQGSMRKPGLALAGVPAMA 206 Query: 194 MAGAHQHDHDHHDHDHHDHGHDHHH------------------RHAHDDHGHHHDHGPEH 235 AGA HDHD H HGH H H H HH Sbjct: 207 PAGAASHDHD------HAHGHSHSHPLQAHAGHDHHDHGHSHGHDHAHAHDHHGHDHAHD 260 Query: 236 GHDAQHVHDEHCGHSHGPTPAELAGPGGWRRGLGAILTVGIRPCSGAILVLVFALAQGLF 295 A +HCGHSHGPTPAELAGPGGW+RGLGA+LTVGIRPCSGAILVLVFALAQG+F Sbjct: 261 HAHAHDESCDHCGHSHGPTPAELAGPGGWQRGLGAVLTVGIRPCSGAILVLVFALAQGMF 320 Query: 296 WAGIAATFVMGLGTAITVAAIALVAVSARGVAERLSAARDGGGMVIMRGLEFAAAGLVLL 355 WAGIAATFVMGLGTAITVA IA +AVSA+GVA RL+A G G ++MRG+EF AAGLVLL Sbjct: 321 WAGIAATFVMGLGTAITVATIATIAVSAKGVARRLAAGHAGAGALVMRGVEFGAAGLVLL 380 Query: 356 FGLGLLFGYVAAERATCL 373 FG+GLL GYVAAER TCL Sbjct: 381 FGIGLLLGYVAAERVTCL 398 >ref|YP_567999.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisB5] gb|ABE38098.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisB5] Length = 389 Score = 436 bits (1121), Expect = e-120, Method: Compositional matrix adjust. Identities = 259/379 (68%), Positives = 288/379 (75%), Gaps = 28/379 (7%) Query: 19 LAAFALL-DGAVHALLAQNPFGAPRA-AEPQ-GGLVGWLLAKQSEFYREISQTIRAAKSD 75 LAA A + D A+H++ AQNPFG PR AEPQ GGL GWL+A+QS FYR++S TIRAAK+D Sbjct: 15 LAAVATVSDAALHSVWAQNPFGGPRPPAEPQSGGLFGWLMAQQSAFYRQMSATIRAAKAD 74 Query: 76 GSAVWTLLVISFAYGIFHAAGPGHGKAVISSYMVANRETARRGIVLSFASALMQSVVAVL 135 GSAVWTLL ISFAYG+FHAAGPGHGKAVISSY+VAN ETARRGI LSF SA++Q++VAVL Sbjct: 75 GSAVWTLLGISFAYGVFHAAGPGHGKAVISSYLVANEETARRGIALSFISAMLQALVAVL 134 Query: 136 IVGICAWLLNATAKTMCGAEKAVEIASYALIAAFGARLVWVKGGGFFRALQ-APG-PALA 193 IVGICAWLLNATAKTMC AE+A+EI SYALIA FGARLVW KGGGFFRALQ A G P LA Sbjct: 135 IVGICAWLLNATAKTMCSAERAIEIVSYALIALFGARLVWSKGGGFFRALQGATGKPTLA 194 Query: 194 MAGAHQHDHDHHDHDHHDHGHDHHHRHAHDDHGHHHDHGPEHGHDAQHVH---------- 243 A A D HG DH H H+ H H H H Sbjct: 195 FATA----PGTADASAVLHGRDHGHDHSQSPQAQALQAHAGHDHAHGHPHHHHDGAHHHP 250 Query: 244 ---------DEHCGHSHGPTPAELAGPGGWRRGLGAILTVGIRPCSGAILVLVFALAQGL 294 +HCGHSH P PAELAGPGGWRRGLGA+LTVGIRPCSGAILVLVFALAQGL Sbjct: 251 AHGHADHDCGDHCGHSHSPEPAELAGPGGWRRGLGAVLTVGIRPCSGAILVLVFALAQGL 310 Query: 295 FWAGIAATFVMGLGTAITVAAIALVAVSARGVAERLSAARDGGGMVIMRGLEFAAAGLVL 354 FWAGIAATF MGLGTAITVAAIA +AVSA+G+A+RL+A GGG++ MRGLEF AAGLVL Sbjct: 311 FWAGIAATFAMGLGTAITVAAIATIAVSAKGLAQRLTAGHAGGGVLFMRGLEFGAAGLVL 370 Query: 355 LFGLGLLFGYVAAERATCL 373 LFG+GLL GY+AAER TCL Sbjct: 371 LFGIGLLLGYIAAERVTCL 389 >ref|NP_946227.1| high-affinity nickel-transporter [Rhodopseudomonas palustris CGA009] emb|CAE26318.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009] Length = 437 Score = 435 bits (1118), Expect = e-120, Method: Compositional matrix adjust. Identities = 261/386 (67%), Positives = 290/386 (75%), Gaps = 36/386 (9%) Query: 17 AVLAAFALLDGAVHALLAQNPFGAPR-AAEPQ-GGLVGWLLAKQSEFYREISQTIRAAKS 74 ++LAA D +HA LA NPFGAP+ AAEPQ GG+VGWLLA+QS FY+++S TIRAAK+ Sbjct: 59 SLLAAGLFADATLHAALAHNPFGAPKGAAEPQVGGIVGWLLAQQSAFYKQMSATIRAAKA 118 Query: 75 DGSAVWTLLVISFAYGIFHAAGPGHGKAVISSYMVANRETARRGIVLSFASALMQSVVAV 134 DGSAVWTLL ISFAYG+FHAAGPGHGKAVISSY+VAN ETARRGI LSF SA++Q+VVAV Sbjct: 119 DGSAVWTLLAISFAYGVFHAAGPGHGKAVISSYLVANEETARRGIALSFVSAMLQAVVAV 178 Query: 135 LIVGICAWLLNATAKTMCGAEKAVEIASYALIAAFGARLVWVKGGGFFRALQAP--GPAL 192 LIVGICAWLLNATA TMC AE+A+EI SYALIA FGARLVWVKGGGF RALQA P L Sbjct: 179 LIVGICAWLLNATASTMCSAERAIEIGSYALIALFGARLVWVKGGGFLRALQASMRKPQL 238 Query: 193 AMAGAHQHDHDHHDHDHHDHGHDHHHRHAHDDHG-------------------------H 227 AMAG DH H H H HAH H Sbjct: 239 AMAGVPAALADHDHHHHDHDHGHGGHGHAHTSTALGDHQHHHHDHGHDHGHAHSHAHYDH 298 Query: 228 HHDHGPEHGHDAQHVHDEHCGHSHGPTPAELAGPGGWRRGLGAILTVGIRPCSGAILVLV 287 HH HGP D HCGHSHGP P+ELAGPGGWRRGLGA+LTVGIRPCSGAIL++V Sbjct: 299 HHHHGPGEACD-------HCGHSHGPEPSELAGPGGWRRGLGAVLTVGIRPCSGAILLMV 351 Query: 288 FALAQGLFWAGIAATFVMGLGTAITVAAIALVAVSARGVAERLSAARDGGGMVIMRGLEF 347 FALAQGLFWAGI ATFVM LGTAITVA IA+ AVSA+G+A +L+A RDGGGM++MRGLEF Sbjct: 352 FALAQGLFWAGIVATFVMALGTAITVATIAVAAVSAKGLARKLAAQRDGGGMLVMRGLEF 411 Query: 348 AAAGLVLLFGLGLLFGYVAAERATCL 373 AAAGLVLL G GLL G+VAAER TCL Sbjct: 412 AAAGLVLLLGCGLLLGFVAAERVTCL 437 >ref|YP_783705.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisA53] gb|ABJ08725.1| high-affinity nickel-transporter [Rhodopseudomonas palustris BisA53] Length = 368 Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust. Identities = 252/355 (70%), Positives = 280/355 (78%), Gaps = 19/355 (5%) Query: 25 LDGAVHALLAQNPFGAPRAAEPQ--GGLVGWLLAKQSEFYREISQTIRAAKSDGSAVWTL 82 DG V LAQ PFGAPR A GGLVGW+L KQSEFYR++S TIRAAKSDGSAVWTL Sbjct: 27 FDGTVSHALAQTPFGAPRPATTSQAGGLVGWILDKQSEFYRQMSATIRAAKSDGSAVWTL 86 Query: 83 LVISFAYGIFHAAGPGHGKAVISSYMVANRETARRGIVLSFASALMQSVVAVLIVGICAW 142 + ISFAYG+FHAAGPGHGKAVISSY+VAN ETARRGI+LSF SA+MQ+++AV IVGI AW Sbjct: 87 IGISFAYGVFHAAGPGHGKAVISSYVVANEETARRGILLSFVSAMMQALMAVAIVGIGAW 146 Query: 143 LLNATAKTMCGAEKAVEIASYALIAAFGARLVWVKGGGFFRALQ----APGPALAMAGAH 198 LLNATAKTMC AE+ +EIASYALIAAFGARLVW KGG F RALQ +P AL AGA Sbjct: 147 LLNATAKTMCSAERVIEIASYALIAAFGARLVWSKGGNFMRALQTAPASPAAALVPAGAS 206 Query: 199 QHDHDHHDHDHHDHGHDHHHRHAHDDHGHHHDHGPEHGHDAQHVHDEHCGHSHGPTPAEL 258 HDH HHDH H H HGH H A HVHD HCGH+HGP PA+L Sbjct: 207 HGGHDHGHAHHHDH----AHDHGACSHGHAH---------APHVHDAHCGHAHGPEPAQL 253 Query: 259 AGPGGWRRGLGAILTVGIRPCSGAILVLVFALAQGLFWAGIAATFVMGLGTAITVAAIAL 318 AGPGGWRRG GA++ VG+RPCSGAILVLVFALAQGLFWAG+AATF MGLGTAITV IA Sbjct: 254 AGPGGWRRGFGAVMAVGLRPCSGAILVLVFALAQGLFWAGVAATFAMGLGTAITVGVIAT 313 Query: 319 VAVSARGVAERLSAARDGGGMVIMRGLEFAAAGLVLLFGLGLLFGYVAAERATCL 373 +AVSA+G+A RLS AR G G+++MRG+EFAAAGLVLLFGLGLL GY+AAER TCL Sbjct: 314 LAVSAKGLARRLSGARPGAGILVMRGVEFAAAGLVLLFGLGLLLGYIAAERVTCL 368