BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0013.p (214 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774407.1| hypothetical protein bll7767 [Bradyrhizobium ja... 314 6e-84 ref|YP_001208122.1| hypothetical protein BRADO6266 [Bradyrhizobi... 313 1e-83 ref|YP_783694.1| WD-40 repeat-containing protein [Rhodopseudomon... 311 4e-83 ref|YP_001237485.1| hypothetical protein BBta_1343 [Bradyrhizobi... 311 5e-83 ref|YP_488149.1| WD-40 repeat-containing protein [Rhodopseudomon... 310 7e-83 >ref|NP_774407.1| hypothetical protein bll7767 [Bradyrhizobium japonicum USDA 110] dbj|BAC53032.1| bll7767 [Bradyrhizobium japonicum USDA 110] Length = 340 Score = 314 bits (804), Expect = 6e-84, Method: Compositional matrix adjust. Identities = 154/211 (72%), Positives = 173/211 (81%) Query: 1 VMKEFDPGEAPSSIVSITDRVKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITR 60 +MKEF P +SIVS+TDRVKP+ LG+ V SVHFLGDRA FVG EE VA + GEIT Sbjct: 1 MMKEFTPAPDSASIVSVTDRVKPVALGMGVTSVHFLGDRAAFVGGEENVAFVDSQGEITT 60 Query: 61 TETHFGAILCAASDGKRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVA 120 H G IL ASDGKRLV GGDDGK++++DAKGE +++ATD KRRWID VALH+DG A Sbjct: 61 VAVHGGGILSTASDGKRLVMGGDDGKVVSLDAKGEVTLLATDPKRRWIDAVALHADGAFA 120 Query: 121 WSAGKTAFVRNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLE 180 WSAGKTA V++ K EEK+ EVPSTVGGLAFAPKGLRLAIAHYNG TLWFPNMAA+ EFL Sbjct: 121 WSAGKTATVKSGKTEEKSLEVPSTVGGLAFAPKGLRLAIAHYNGATLWFPNMAASAEFLP 180 Query: 181 WAGSHLAVMFSPDNKFLVTAMHEPAMHGWRL 211 WAGSH AV FSPDNKFLVTAMHEPA+HGWRL Sbjct: 181 WAGSHHAVTFSPDNKFLVTAMHEPALHGWRL 211 >ref|YP_001208122.1| hypothetical protein BRADO6266 [Bradyrhizobium sp. ORS 278] emb|CAL79907.1| Conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 339 Score = 313 bits (802), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 150/210 (71%), Positives = 169/210 (80%) Query: 2 MKEFDPGEAPSSIVSITDRVKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRT 61 M FD +SIVS+TD+VKP+ LG+AV SVH+LGDRA FVG EE VA+ ADGEI++ Sbjct: 1 MSSFDQSGEAASIVSVTDKVKPISLGMAVTSVHYLGDRAAFVGTEESVAVVDADGEISKV 60 Query: 62 ETHFGAILCAASDGKRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAW 121 E G IL A SDG R++ GGDDGK+ ++D G SV+ATD KRRWIDNVA+H DG +AW Sbjct: 61 EVTSGGILSAVSDGSRILFGGDDGKVSSLDKAGSVSVLATDPKRRWIDNVAMHPDGAIAW 120 Query: 122 SAGKTAFVRNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEW 181 S GKTAFVR PKGEEK+ EVPST GGLAFAPKGLRLAIAHYNG TLWFPNMA PEFL W Sbjct: 121 SVGKTAFVRAPKGEEKSLEVPSTAGGLAFAPKGLRLAIAHYNGATLWFPNMAGEPEFLGW 180 Query: 182 AGSHLAVMFSPDNKFLVTAMHEPAMHGWRL 211 AGSH AV FSPDNKFLVTAMHEPA+HGWRL Sbjct: 181 AGSHHAVTFSPDNKFLVTAMHEPALHGWRL 210 >ref|YP_783694.1| WD-40 repeat-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ08714.1| WD-40 repeat protein [Rhodopseudomonas palustris BisA53] Length = 339 Score = 311 bits (797), Expect = 4e-83, Method: Compositional matrix adjust. Identities = 148/211 (70%), Positives = 166/211 (78%) Query: 1 VMKEFDPGEAPSSIVSITDRVKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITR 60 +M DPG SI S+TDRV+ LG S +FLGD VG EE V + A G +R Sbjct: 1 MMSALDPGAETPSIASVTDRVRQFQLGAPSASAYFLGDTLAVVGTEEAVTLIDAAGATSR 60 Query: 61 TETHFGAILCAASDGKRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVA 120 E FGAILCAASDGKR+V GGDDGKL+A+DA G + +ATD KRRWIDNVALH DG VA Sbjct: 61 VEVSFGAILCAASDGKRVVIGGDDGKLVALDASGTITTLATDPKRRWIDNVALHPDGAVA 120 Query: 121 WSAGKTAFVRNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLE 180 WSAGKTAF+R PKGE K+ +VPSTVGGLAFAPKGLRLA+AHYNGVTLWFPNMAA PE LE Sbjct: 121 WSAGKTAFIRPPKGEAKSLDVPSTVGGLAFAPKGLRLAVAHYNGVTLWFPNMAAKPEVLE 180 Query: 181 WAGSHLAVMFSPDNKFLVTAMHEPAMHGWRL 211 WAGSHL V+FSPDNKFLVT+MHEPA+HGWRL Sbjct: 181 WAGSHLGVVFSPDNKFLVTSMHEPALHGWRL 211 >ref|YP_001237485.1| hypothetical protein BBta_1343 [Bradyrhizobium sp. BTAi1] gb|ABQ33579.1| WD-40 repeat-containing protein [Bradyrhizobium sp. BTAi1] Length = 339 Score = 311 bits (796), Expect = 5e-83, Method: Compositional matrix adjust. Identities = 149/210 (70%), Positives = 170/210 (80%) Query: 2 MKEFDPGEAPSSIVSITDRVKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRT 61 M FD G +SIVS+TD+VKP+ LG+AV +VH+LGDRA FVG EE VA+ A+GEI++ Sbjct: 1 MSSFDQGGEAASIVSVTDKVKPVSLGMAVTAVHYLGDRAAFVGTEETVAVVDAEGEISKV 60 Query: 62 ETHFGAILCAASDGKRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAW 121 + G IL A SDG R++ GGDDGK+ A+D G SV+ATD KRRWIDNVA+H DG +AW Sbjct: 61 DVTGGGILSAVSDGSRILIGGDDGKVTALDKAGTVSVLATDPKRRWIDNVAVHPDGAIAW 120 Query: 122 SAGKTAFVRNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEW 181 S GKTAFVR PKGEEK+ EVPST GGLAFAPKGLRLAIAHYNG TLWFPNMA PEFL W Sbjct: 121 SVGKTAFVRAPKGEEKSLEVPSTAGGLAFAPKGLRLAIAHYNGATLWFPNMAGEPEFLGW 180 Query: 182 AGSHLAVMFSPDNKFLVTAMHEPAMHGWRL 211 AGSH AV FSPDNKFLVTAMHEPA+HGWRL Sbjct: 181 AGSHHAVTFSPDNKFLVTAMHEPALHGWRL 210 >ref|YP_488149.1| WD-40 repeat-containing protein [Rhodopseudomonas palustris HaA2] gb|ABD09238.1| WD-40 repeat protein [Rhodopseudomonas palustris HaA2] Length = 339 Score = 310 bits (795), Expect = 7e-83, Method: Compositional matrix adjust. Identities = 146/210 (69%), Positives = 172/210 (81%) Query: 2 MKEFDPGEAPSSIVSITDRVKPLPLGVAVGSVHFLGDRAFFVGAEEGVAIATADGEITRT 61 M +F+ +SIVS+TDRV+ + +G VG+VHFLGD A F+GAEE A +DGE + Sbjct: 1 MSDFETSGEAASIVSVTDRVREVAIGAPVGAVHFLGDTAVFIGAEENATFAKSDGESSTV 60 Query: 62 ETHFGAILCAASDGKRLVTGGDDGKLIAIDAKGETSVIATDAKRRWIDNVALHSDGTVAW 121 H GA+L + +DGKR+V+GGDDGK++A+DA G+ + ATDAKRRWIDNVALH DG VAW Sbjct: 61 ALHGGAVLSSVTDGKRIVSGGDDGKVMALDAGGKAELFATDAKRRWIDNVALHPDGAVAW 120 Query: 122 SAGKTAFVRNPKGEEKTFEVPSTVGGLAFAPKGLRLAIAHYNGVTLWFPNMAANPEFLEW 181 SAGK A+VR PK EEK FEVPSTVGGLAFAPKG+RLAIAHYNGVTLWFPNMAAN E LEW Sbjct: 121 SAGKIAYVRAPKAEEKFFEVPSTVGGLAFAPKGMRLAIAHYNGVTLWFPNMAANAEMLEW 180 Query: 182 AGSHLAVMFSPDNKFLVTAMHEPAMHGWRL 211 AGSHL VMFSPDN+FLVT+MHEPA+HGWRL Sbjct: 181 AGSHLGVMFSPDNRFLVTSMHEPALHGWRL 210