BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0012.p (345 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001989962.1| cobalamin synthesis protein P47K [Rhodopseud... 593 e-167 ref|NP_946214.1| cobalamin synthesis protein P47K [Rhodopseudomo... 592 e-167 ref|YP_783693.1| cobalamin synthesis protein, P47K [Rhodopseudom... 589 e-166 ref|NP_774408.1| hypothetical protein bll7768 [Bradyrhizobium ja... 588 e-166 ref|YP_004107387.1| cobalamin synthesis protein P47K [Rhodopseud... 588 e-166 >ref|YP_001989962.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris TIE-1] gb|ACE99486.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris TIE-1] Length = 349 Score = 593 bits (1528), Expect = e-167, Method: Compositional matrix adjust. Identities = 304/347 (87%), Positives = 315/347 (90%), Gaps = 3/347 (0%) Query: 2 AEASQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 61 + A+ KIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV Sbjct: 3 STAASKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 62 Query: 62 FEMNNGCVCCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNA 121 FEMNNGCVCCTVRGDLVRI+ GLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQ A Sbjct: 63 FEMNNGCVCCTVRGDLVRILAGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQNAA 122 Query: 122 RLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVSKPELAEVEARIRGINPY 181 RLDAVVTVADAKWLS+RLKDAPEAKNQIAFADVIVLNKTDLVS ELAEVEARIR INPY Sbjct: 123 RLDAVVTVADAKWLSERLKDAPEAKNQIAFADVIVLNKTDLVSPAELAEVEARIRAINPY 182 Query: 182 AKLHRTERCQVGLTDVLERGAFDLDRILEIEPDFLEA---GDDHDHDHDHHHHHDHDNGH 238 AKLHRTERCQV L DVLERGAFDLDRILEIEP FLEA HDHDH HHHH + Sbjct: 183 AKLHRTERCQVALADVLERGAFDLDRILEIEPAFLEADDHDHHHDHDHGHHHHGHDHHHD 242 Query: 239 GGLKHYHDEDMQSLSLRSEKPLDPTKFMPWLQQLVATEGQKILRSKGILAFTGDDDRYVF 298 GLKHYHDEDMQSLSL+S+KPLDP KFMPWLQQLV TEG KILRSKGILAFTGDDDRYVF Sbjct: 243 HGLKHYHDEDMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFTGDDDRYVF 302 Query: 299 QGVHMMLEGDHQRKWKDGEKRESRVVFIGRELPEQAIRDGFEQCITT 345 QGVHMMLEGDHQR WK+GE RESRVVFIGR+LPEQAIRDGF +CI + Sbjct: 303 QGVHMMLEGDHQRAWKEGEPRESRVVFIGRDLPEQAIRDGFAKCIAS 349 >ref|NP_946214.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris CGA009] emb|CAE26305.1| possible CobW protein involved in cobalamin synthesis [Rhodopseudomonas palustris CGA009] Length = 362 Score = 592 bits (1526), Expect = e-167, Method: Compositional matrix adjust. Identities = 304/347 (87%), Positives = 315/347 (90%), Gaps = 3/347 (0%) Query: 2 AEASQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 61 + A+ KIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV Sbjct: 16 STAASKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 75 Query: 62 FEMNNGCVCCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNA 121 FEMNNGCVCCTVRGDLVRI+ GLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQ A Sbjct: 76 FEMNNGCVCCTVRGDLVRILAGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQNAA 135 Query: 122 RLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVSKPELAEVEARIRGINPY 181 RLDAVVTVADAKWLS+RLKDAPEAKNQIAFADVIVLNKTDLVS ELAEVEARIR INPY Sbjct: 136 RLDAVVTVADAKWLSERLKDAPEAKNQIAFADVIVLNKTDLVSPAELAEVEARIRAINPY 195 Query: 182 AKLHRTERCQVGLTDVLERGAFDLDRILEIEPDFLEA---GDDHDHDHDHHHHHDHDNGH 238 AKLHRTERCQV L DVLERGAFDLDRILEIEP FLEA HDHDH HHHH + Sbjct: 196 AKLHRTERCQVALADVLERGAFDLDRILEIEPAFLEADDHDHHHDHDHGHHHHGHDHHHD 255 Query: 239 GGLKHYHDEDMQSLSLRSEKPLDPTKFMPWLQQLVATEGQKILRSKGILAFTGDDDRYVF 298 GLKHYHDEDMQSLSL+S+KPLDP KFMPWLQQLV TEG KILRSKGILAFTGDDDRYVF Sbjct: 256 HGLKHYHDEDMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFTGDDDRYVF 315 Query: 299 QGVHMMLEGDHQRKWKDGEKRESRVVFIGRELPEQAIRDGFEQCITT 345 QGVHMMLEGDHQR WK+GE RESRVVFIGR+LPEQAIRDGF +CI + Sbjct: 316 QGVHMMLEGDHQRAWKEGEPRESRVVFIGRDLPEQAIRDGFAKCIAS 362 >ref|YP_783693.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris BisA53] gb|ABJ08713.1| cobalamin synthesis protein, P47K [Rhodopseudomonas palustris BisA53] Length = 350 Score = 589 bits (1519), Expect = e-166, Method: Compositional matrix adjust. Identities = 293/357 (82%), Positives = 308/357 (86%), Gaps = 26/357 (7%) Query: 4 ASQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEVFE 63 AS KIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEVFE Sbjct: 5 ASDKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEVFE 64 Query: 64 MNNGCVCCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNARL 123 MNNGC+CCTVRGDLVRI+ GLMKR+GKFDAIIVETTGLADPAPVAQTFFVDEDVQ NARL Sbjct: 65 MNNGCICCTVRGDLVRILGGLMKRRGKFDAIIVETTGLADPAPVAQTFFVDEDVQNNARL 124 Query: 124 DAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVSKPELAEVEARIRGINPYAK 183 DAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLV+K ELAEVEARIRGINPYA+ Sbjct: 125 DAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVTKAELAEVEARIRGINPYAR 184 Query: 184 LHRTERCQVGLTDVLERGAFDLDRILEIEPDFLEAGDD---------------HDHDHDH 228 LH TERCQV L DVL+RGAFDLDRILEIEP+FL+ GD HDH HDH Sbjct: 185 LHHTERCQVALADVLDRGAFDLDRILEIEPEFLDTGDGHDHDHEHCDDHAHCGHDHSHDH 244 Query: 229 HHHHDHDNGHGGLKHYHDEDMQSLSLRSEKPLDPTKFMPWLQQLVATEGQKILRSKGILA 288 GLKHYHDE MQSL+L SE+P+DP KFMPWLQQL+A EG KILRSKGIL+ Sbjct: 245 -----------GLKHYHDEHMQSLALSSEQPVDPAKFMPWLQQLIAAEGGKILRSKGILS 293 Query: 289 FTGDDDRYVFQGVHMMLEGDHQRKWKDGEKRESRVVFIGRELPEQAIRDGFEQCITT 345 F GDDDRYVFQGVHMMLEGDHQR WKD E+R SRVVFIGR+LPEQAIRDGF CI Sbjct: 294 FRGDDDRYVFQGVHMMLEGDHQRAWKDDEQRLSRVVFIGRDLPEQAIRDGFANCIAA 350 >ref|NP_774408.1| hypothetical protein bll7768 [Bradyrhizobium japonicum USDA 110] dbj|BAC53033.1| bll7768 [Bradyrhizobium japonicum USDA 110] Length = 348 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 301/348 (86%), Positives = 314/348 (90%), Gaps = 3/348 (0%) Query: 1 MAEA-SQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADE 59 M+EA SQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADE Sbjct: 1 MSEATSQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADE 60 Query: 60 EVFEMNNGCVCCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQK 119 EVFEMNNGC+CCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQK Sbjct: 61 EVFEMNNGCICCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQK 120 Query: 120 NARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVSKPELAEVEARIRGIN 179 NARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLV+K ELAEVEARIR IN Sbjct: 121 NARLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVTKGELAEVEARIRAIN 180 Query: 180 PYAKLHRTERCQVGLTDVLERGAFDLDRILEIEPDFLEA--GDDHDHDHDHHHHHDHDNG 237 PYAKLHRTERC V L DVL+RGAFDLDRIL+IEPDFLEA D H H H H H + Sbjct: 181 PYAKLHRTERCSVALADVLDRGAFDLDRILDIEPDFLEADDHDHDHDHHHHGHDHHHHDH 240 Query: 238 HGGLKHYHDEDMQSLSLRSEKPLDPTKFMPWLQQLVATEGQKILRSKGILAFTGDDDRYV 297 GLKHYHDEDMQSLSL+++KPLDP FMPWLQ LV EG KILRSKGILAF DDDRYV Sbjct: 241 GHGLKHYHDEDMQSLSLKTDKPLDPNMFMPWLQNLVQVEGGKILRSKGILAFHDDDDRYV 300 Query: 298 FQGVHMMLEGDHQRKWKDGEKRESRVVFIGRELPEQAIRDGFEQCITT 345 FQGVHMMLEG+HQRKWKDGE RESR+VFIGRELPE+AIR GFE CI + Sbjct: 301 FQGVHMMLEGNHQRKWKDGEPRESRLVFIGRELPEEAIRKGFESCIVS 348 >ref|YP_004107387.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris DX-1] gb|ADU42654.1| cobalamin synthesis protein P47K [Rhodopseudomonas palustris DX-1] Length = 349 Score = 588 bits (1517), Expect = e-166, Method: Compositional matrix adjust. Identities = 302/347 (87%), Positives = 315/347 (90%), Gaps = 3/347 (0%) Query: 2 AEASQKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 61 + A+ KIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV Sbjct: 3 STAASKIPVTVLTGYLGAGKTTLLNRILSENHGKKYAVIVNEFGEIGIDNDLIIGADEEV 62 Query: 62 FEMNNGCVCCTVRGDLVRIMDGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQKNA 121 FEMNNGCVCCTVRGDLVRI+ GLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQ A Sbjct: 63 FEMNNGCVCCTVRGDLVRILAGLMKRKGKFDAIIVETTGLADPAPVAQTFFVDEDVQNAA 122 Query: 122 RLDAVVTVADAKWLSDRLKDAPEAKNQIAFADVIVLNKTDLVSKPELAEVEARIRGINPY 181 RLDAVVTVADAKWLS+RLKDAPEAKNQIAFADVIVLNKTDLV+ ELAEVEARIR INPY Sbjct: 123 RLDAVVTVADAKWLSERLKDAPEAKNQIAFADVIVLNKTDLVTPAELAEVEARIRAINPY 182 Query: 182 AKLHRTERCQVGLTDVLERGAFDLDRILEIEPDFLEA---GDDHDHDHDHHHHHDHDNGH 238 AKLHRTERCQV L DVLERGAFDLDRILEIEPDFLEA HDHDH HHHH + Sbjct: 183 AKLHRTERCQVALADVLERGAFDLDRILEIEPDFLEADDHDHHHDHDHGHHHHGHDHHHG 242 Query: 239 GGLKHYHDEDMQSLSLRSEKPLDPTKFMPWLQQLVATEGQKILRSKGILAFTGDDDRYVF 298 GLKHYHDE MQSLSL+S+KPLDP KFMPWLQQLV TEG KILRSKGILAF GDDDRYVF Sbjct: 243 HGLKHYHDEHMQSLSLKSDKPLDPAKFMPWLQQLVQTEGGKILRSKGILAFRGDDDRYVF 302 Query: 299 QGVHMMLEGDHQRKWKDGEKRESRVVFIGRELPEQAIRDGFEQCITT 345 QGVHMMLEGDHQR W+DGE RESRVVFIGR+LPEQAIRDGF++CI + Sbjct: 303 QGVHMMLEGDHQRAWRDGEVRESRVVFIGRDLPEQAIRDGFDKCIAS 349