BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0165.0003.p (292 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773209.1| MFS permease [Bradyrhizobium japonicum USDA 110... 449 e-124 ref|YP_001241431.1| MFS family transporter [Bradyrhizobium sp. B... 440 e-121 sp|Q44470.1|TUB4_AGRVI RecName: Full=Putative tartrate transport... 415 e-114 ref|YP_766607.1| transmembrane transporter [Rhizobium leguminosa... 404 e-111 sp|P70786.1|TUB3_AGRVI RecName: Full=Putative tartrate transport... 403 e-110 >ref|NP_773209.1| MFS permease [Bradyrhizobium japonicum USDA 110] dbj|BAC51834.1| MFS permease [Bradyrhizobium japonicum USDA 110] Length = 432 Score = 449 bits (1154), Expect = e-124, Method: Compositional matrix adjust. Identities = 243/285 (85%), Positives = 265/285 (92%) Query: 1 MAAAPLSTVLGSPVSGALLEMDGMLGFKGWQWLFVLEAVPAVLLGFVVLGFLTDRPEQAR 60 MAAAPLSTVLGSP+SGALLEMDG+LGFKGWQWLFVLEA+PAVLLGFVVLGFLTDRPE+A+ Sbjct: 146 MAAAPLSTVLGSPISGALLEMDGLLGFKGWQWLFVLEALPAVLLGFVVLGFLTDRPEKAK 205 Query: 61 WLADDERAWLVKTMKAETDGKATTASHSIWRGLADPRVLALALVYFGTSAGLYTLGVWAP 120 WL DDER WLV+TM AET KA TASHSIWRGLADPRVLALAL+YFGTSAGLYTLGVWAP Sbjct: 206 WLTDDERRWLVETMNAETTSKAATASHSIWRGLADPRVLALALIYFGTSAGLYTLGVWAP 265 Query: 121 QIIKQFGLSSIQVGFLNAVPATIAVIAMVLWARHSDRTGERTWHVVLACLMAAAGLALAG 180 QIIKQFGLSS+QVGFLNA+PAT AV+AM+LWARHSDRTGERTWHVV ACL+AAAGLA AG Sbjct: 266 QIIKQFGLSSLQVGFLNALPATAAVVAMILWARHSDRTGERTWHVVWACLLAAAGLAYAG 325 Query: 181 LWTGLAAVIAALTLVNIGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 240 L + AV+ AL L+NIGISS+KPPLWSMPT+FLSG AAAAGIATINSIGNLGGFVGPAM Sbjct: 326 LAASVVAVLVALALINIGISSAKPPLWSMPTLFLSGPAAAAGIATINSIGNLGGFVGPAM 385 Query: 241 IGWIRERTGSFDGGLYFVAGLLVLSAVLTLLLSRAQSAPAQTEPQ 285 IGWI+++TGSF GGLYFVAGLLVLSAVLTLLLSRAQ+AP + PQ Sbjct: 386 IGWIKDQTGSFVGGLYFVAGLLVLSAVLTLLLSRAQTAPVEPVPQ 430 >ref|YP_001241431.1| MFS family transporter [Bradyrhizobium sp. BTAi1] gb|ABQ37525.1| putative transport protein, MFS superfamily [Bradyrhizobium sp. BTAi1] Length = 432 Score = 440 bits (1132), Expect = e-121, Method: Compositional matrix adjust. Identities = 241/281 (85%), Positives = 264/281 (93%) Query: 1 MAAAPLSTVLGSPVSGALLEMDGMLGFKGWQWLFVLEAVPAVLLGFVVLGFLTDRPEQAR 60 MAAAPLSTVLGSPVSGALLEMDG+LGFKGWQWLF++EA+PAVLLGFVVLG++TDRPEQAR Sbjct: 146 MAAAPLSTVLGSPVSGALLEMDGILGFKGWQWLFLIEALPAVLLGFVVLGYMTDRPEQAR 205 Query: 61 WLADDERAWLVKTMKAETDGKATTASHSIWRGLADPRVLALALVYFGTSAGLYTLGVWAP 120 WLAD+ER WLV+TM AE KA TASHSIWRGLAD RVLALALVYFGTSAGLYTLGVWAP Sbjct: 206 WLADEERDWLVRTMNAELASKAATASHSIWRGLADIRVLALALVYFGTSAGLYTLGVWAP 265 Query: 121 QIIKQFGLSSIQVGFLNAVPATIAVIAMVLWARHSDRTGERTWHVVLACLMAAAGLALAG 180 QIIKQFGLSS VGFLNAVP TIAV+ M+LWARHSDRT ERTWHVVLAC++AA GL LAG Sbjct: 266 QIIKQFGLSSFAVGFLNAVPPTIAVVVMILWARHSDRTAERTWHVVLACVVAAVGLWLAG 325 Query: 181 LWTGLAAVIAALTLVNIGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 240 L T +AAV+AALTLVN+GISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM Sbjct: 326 LSTSVAAVLAALTLVNVGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 385 Query: 241 IGWIRERTGSFDGGLYFVAGLLVLSAVLTLLLSRAQSAPAQ 281 IGWI+++TGSF+GGLYFVAGLLV+SAVLTLLL+R+QSA A+ Sbjct: 386 IGWIKDQTGSFNGGLYFVAGLLVVSAVLTLLLARSQSAKAE 426 >sp|Q44470.1|TUB4_AGRVI RecName: Full=Putative tartrate transporter gb|AAA68697.1| putative tartrate transporter; inducible by tartrate; Method: conceptual translation supplied by author [Agrobacterium vitis] prf||2124372B ttuB gene Length = 433 Score = 415 bits (1067), Expect = e-114, Method: Compositional matrix adjust. Identities = 213/287 (74%), Positives = 242/287 (84%), Gaps = 7/287 (2%) Query: 1 MAAAPLSTVLGSPVSGALLEMDGMLGFKGWQWLFVLEAVPAVLLGFVVLGFLTDRPEQAR 60 MAAAPLSTVLGSP+SGAL+EM G LG GWQW+F++EA PAV+LG VVL +LTDRPE+A+ Sbjct: 146 MAAAPLSTVLGSPISGALMEMHGFLGLAGWQWMFLIEAAPAVILGVVVLFYLTDRPEKAK 205 Query: 61 WLADDERAWLVKTMKAETDGKATTASHSIWRGLADPRVLALALVYFGTSAGLYTLGVWAP 120 WL++DER WLVKTM AE K ASHSI GLAD RV+ALALVYFGTSAGLYTLG+WAP Sbjct: 206 WLSEDERNWLVKTMNAEQAAKGK-ASHSILAGLADIRVIALALVYFGTSAGLYTLGIWAP 264 Query: 121 QIIKQFGLSSIQVGFLNAVPATIAVIAMVLWARHSDRTGERTWHVVLACLMAAAGLALAG 180 QIIK+FGLSS+QVGF+NAVP AV AMVLWARHSD+TGERTWHVV ACL+AA GLA A Sbjct: 265 QIIKEFGLSSLQVGFINAVPGIFAVAAMVLWARHSDKTGERTWHVVGACLLAAVGLAFAT 324 Query: 181 LWTGLAAVIAALTLVNIGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 240 T + V+ ALTLVNIGIS SKPPLWSMPT+FLSG AAAAGIATINSIGNLGGFVGP+M Sbjct: 325 GATSVFTVLIALTLVNIGISCSKPPLWSMPTLFLSGPAAAAGIATINSIGNLGGFVGPSM 384 Query: 241 IGWIRERTGSFDGGLYFVAGLLVLSAVLTLLLSR------AQSAPAQ 281 IGWI++ TGSF GGLYFVAGLLV+SA++TL+LSR + AP Q Sbjct: 385 IGWIKDTTGSFAGGLYFVAGLLVVSAIVTLVLSRTAPENGGKVAPVQ 431 >ref|YP_766607.1| transmembrane transporter [Rhizobium leguminosarum bv. viciae 3841] emb|CAK06493.1| putative transmembrane transporter [Rhizobium leguminosarum bv. viciae 3841] Length = 463 Score = 404 bits (1038), Expect = e-111, Method: Compositional matrix adjust. Identities = 211/283 (74%), Positives = 246/283 (86%), Gaps = 1/283 (0%) Query: 1 MAAAPLSTVLGSPVSGALLEMDGMLGFKGWQWLFVLEAVPAVLLGFVVLGFLTDRPEQAR 60 MAAAPLSTVLGSP+SGAL+EM G LG GWQW+F++EA PA++LG VVL +LTDRPE+A+ Sbjct: 177 MAAAPLSTVLGSPISGALMEMHGFLGLAGWQWMFLIEAAPAIILGVVVLFYLTDRPEKAK 236 Query: 61 WLADDERAWLVKTMKAETDGKATTASHSIWRGLADPRVLALALVYFGTSAGLYTLGVWAP 120 WL D+ER+WLVKTM AE GK + ASHSI GLAD RV+ALALVYFGTSAGLYTLG+WAP Sbjct: 237 WLTDEERSWLVKTMNAEQAGK-SKASHSILAGLADIRVIALALVYFGTSAGLYTLGIWAP 295 Query: 121 QIIKQFGLSSIQVGFLNAVPATIAVIAMVLWARHSDRTGERTWHVVLACLMAAAGLALAG 180 QIIKQFGLS++QVGF+NA+P AV+AM+LWARHSD+TGERTWHVV ACL+AAAGLA A Sbjct: 296 QIIKQFGLSALQVGFINAIPGIFAVVAMILWARHSDKTGERTWHVVGACLLAAAGLAFAT 355 Query: 181 LWTGLAAVIAALTLVNIGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 240 T + V+ ALTLVNIGISSSKPPLWSMPT+FLSG AAAAGIATINSIGNLGGFVGP+M Sbjct: 356 GATSVYTVLIALTLVNIGISSSKPPLWSMPTLFLSGPAAAAGIATINSIGNLGGFVGPSM 415 Query: 241 IGWIRERTGSFDGGLYFVAGLLVLSAVLTLLLSRAQSAPAQTE 283 IGWI++ TGSF GGLYFVAGLL++SA+LTL+L+R+ A T Sbjct: 416 IGWIKDTTGSFAGGLYFVAGLLMISAILTLVLARSGPKAADTR 458 >sp|P70786.1|TUB3_AGRVI RecName: Full=Putative tartrate transporter gb|AAB61622.1| membrane protein [Agrobacterium vitis] Length = 449 Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust. Identities = 209/283 (73%), Positives = 245/283 (86%), Gaps = 1/283 (0%) Query: 1 MAAAPLSTVLGSPVSGALLEMDGMLGFKGWQWLFVLEAVPAVLLGFVVLGFLTDRPEQAR 60 MAAAPLSTVLGSP+SGAL+EM G++G GWQW+F++EA PA++LG VVL FLTDRPE+A+ Sbjct: 163 MAAAPLSTVLGSPISGALMEMHGLMGLAGWQWMFLIEAAPALILGVVVLFFLTDRPEKAK 222 Query: 61 WLADDERAWLVKTMKAETDGKATTASHSIWRGLADPRVLALALVYFGTSAGLYTLGVWAP 120 WL ++ER WLVKTM AE G+ T ASHS+ GLAD RV+ALALVYFGTSAGLYTLG+WAP Sbjct: 223 WLTEEERNWLVKTMNAEQAGRGT-ASHSVMAGLADIRVIALALVYFGTSAGLYTLGIWAP 281 Query: 121 QIIKQFGLSSIQVGFLNAVPATIAVIAMVLWARHSDRTGERTWHVVLACLMAAAGLALAG 180 QIIKQFGLS+I+VGF+NAVP AV+AMVLWARHSDRTGERTWHVV ACL+AAAGLA A Sbjct: 282 QIIKQFGLSAIEVGFINAVPGIFAVVAMVLWARHSDRTGERTWHVVGACLLAAAGLAFAA 341 Query: 181 LWTGLAAVIAALTLVNIGISSSKPPLWSMPTMFLSGSAAAAGIATINSIGNLGGFVGPAM 240 T + V+ ALT+VN+GIS SKPPLWSMPTMFLSG AAAAGIATINSIGNLGGFVGP+M Sbjct: 342 GATSVFMVLIALTIVNVGISCSKPPLWSMPTMFLSGPAAAAGIATINSIGNLGGFVGPSM 401 Query: 241 IGWIRERTGSFDGGLYFVAGLLVLSAVLTLLLSRAQSAPAQTE 283 IGWI++ TGSF GGLYFVAGLL++SA+LTL+L+R+ +T Sbjct: 402 IGWIKDTTGSFTGGLYFVAGLLLISAILTLILARSSPKAVETR 444