BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0018.p (245 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771192.1| hypothetical protein bll4552 [Bradyrhizobium ja... 247 1e-63 ref|YP_001240085.1| hypothetical protein BBta_4116 [Bradyrhizobi... 239 3e-61 ref|YP_001205809.1| hypothetical protein BRADO3818 [Bradyrhizobi... 231 9e-59 ref|YP_569476.1| hypothetical protein RPD_2343 [Rhodopseudomonas... 227 1e-57 ref|YP_486764.1| hypothetical protein RPB_3157 [Rhodopseudomonas... 213 3e-53 >ref|NP_771192.1| hypothetical protein bll4552 [Bradyrhizobium japonicum USDA 110] dbj|BAC49817.1| bll4552 [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 247 bits (631), Expect = 1e-63, Method: Compositional matrix adjust. Identities = 123/164 (75%), Positives = 139/164 (84%), Gaps = 4/164 (2%) Query: 86 GSGKNPQAPAA----GAKASKSAKAAAKDKGPKQAPTVLTQAGAPQLTAEQIVANSDANI 141 G+GK+ A +A GAKASK AK A +D + TVLTQ GAPQ +AEQIVANSD+ I Sbjct: 145 GAGKDKDAKSAKAGKGAKASKEAKNAPQDTKDNKDVTVLTQTGAPQQSAEQIVANSDSYI 204 Query: 142 ERIKKELNLTPEQEKNWAGFNSAMHYLGHNGADRLNLRIARAQRDPPDDIIEQMRNEAQF 201 ERIK ELNLTP+QEK+W GF+SAMHYLGHNGA+RLNLR+ARA+RDPPDDIIEQMRNEAQF Sbjct: 205 ERIKTELNLTPDQEKHWYGFSSAMHYLGHNGAERLNLRVARAKRDPPDDIIEQMRNEAQF 264 Query: 202 LNDRAVDQRGVADAAEPLFASLDDKQKQIFINEMVRLSHERGLD 245 L DRA DQR VADAAEPL++SLDDKQKQ+FI EMVRLSHERGLD Sbjct: 265 LIDRAADQRNVADAAEPLYSSLDDKQKQVFIQEMVRLSHERGLD 308 >ref|YP_001240085.1| hypothetical protein BBta_4116 [Bradyrhizobium sp. BTAi1] gb|ABQ36179.1| hypothetical protein BBta_4116 [Bradyrhizobium sp. BTAi1] Length = 219 Score = 239 bits (609), Expect = 3e-61, Method: Compositional matrix adjust. Identities = 160/220 (72%), Positives = 178/220 (80%), Gaps = 3/220 (1%) Query: 28 VPHMVDAQ-IVQGVEKGAREGNKAAGPVGGVLGGAIGGVVGVVTGVTGVLTGNNGNNATG 86 +P VDAQ + +G+E+GAREGN+AAGPVGGVLGGAIGGVVGVVTGVTGVLTGN Sbjct: 1 MPRQVDAQGLFKGMEQGAREGNRAAGPVGGVLGGAIGGVVGVVTGVTGVLTGNEAQPNPR 60 Query: 87 SGKNPQA-PAAGAKASKSAKAAAKDKGPKQAPTVLTQAGAPQLTAEQIVANSDANIERIK 145 S P+ P A AK KS+K A K K A +LTQ G PQLTAEQIVANSD+N+ER+K Sbjct: 61 SAAPPEGNPPAEAKKGKSSKVAKASKPAKAA-PMLTQQGTPQLTAEQIVANSDSNVERLK 119 Query: 146 KELNLTPEQEKNWAGFNSAMHYLGHNGADRLNLRIARAQRDPPDDIIEQMRNEAQFLNDR 205 LNLT EQEKNWA F +AMH LG NGADRLNLRIAR++RDPPDDIIEQMRNEAQFL DR Sbjct: 120 VGLNLTAEQEKNWAPFANAMHALGRNGADRLNLRIARSKRDPPDDIIEQMRNEAQFLVDR 179 Query: 206 AVDQRGVADAAEPLFASLDDKQKQIFINEMVRLSHERGLD 245 A DQR V+DAAEPLF SLDDKQKQ+FI+EMVRLSHERGLD Sbjct: 180 AADQRAVSDAAEPLFTSLDDKQKQMFIDEMVRLSHERGLD 219 >ref|YP_001205809.1| hypothetical protein BRADO3818 [Bradyrhizobium sp. ORS 278] emb|CAL77584.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 227 Score = 231 bits (588), Expect = 9e-59, Method: Compositional matrix adjust. Identities = 150/233 (64%), Positives = 168/233 (72%), Gaps = 21/233 (9%) Query: 28 VPHMVDAQ-IVQGVEKGAREGNKAAGPVGGVLGGAIGGVVGVVTGVTGVLTGNNGNNATG 86 +P + AQ +++GVE+GAREGN+AAGPVGG LGGAIGGVVGVVTGVTG TGN G + Sbjct: 1 MPRQLVAQGLLKGVEQGAREGNRAAGPVGGALGGAIGGVVGVVTGVTGAFTGNAGQPSV- 59 Query: 87 SGKNPQAPAAGAKASKSAKAAAKDKGPKQAPT--------------VLTQAGAPQLTAEQ 132 P APA AK K K G A T +LTQ G P+LTAEQ Sbjct: 60 ---QPSAPAREAKTE--GKTDTKTDGKTDAKTTRSAKKTKVAKAAPMLTQPGVPELTAEQ 114 Query: 133 IVANSDANIERIKKELNLTPEQEKNWAGFNSAMHYLGHNGADRLNLRIARAQRDPPDDII 192 IVANSDAN+ER+K L LT EQ K W F +AMH LG NGA+RLNLRIARA+RDPPDDI+ Sbjct: 115 IVANSDANVERLKNGLALTEEQAKTWGPFANAMHALGRNGAERLNLRIARAKRDPPDDIV 174 Query: 193 EQMRNEAQFLNDRAVDQRGVADAAEPLFASLDDKQKQIFINEMVRLSHERGLD 245 EQMRNEAQFL DRA DQR VADA+EPLF SLDDKQKQIFI+EMVRLS ERGLD Sbjct: 175 EQMRNEAQFLVDRAADQRAVADASEPLFTSLDDKQKQIFIDEMVRLSRERGLD 227 >ref|YP_569476.1| hypothetical protein RPD_2343 [Rhodopseudomonas palustris BisB5] gb|ABE39575.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 241 Score = 227 bits (578), Expect = 1e-57, Method: Compositional matrix adjust. Identities = 149/230 (64%), Positives = 169/230 (73%), Gaps = 11/230 (4%) Query: 20 AATVTLLAVPHMVDAQ-IVQGVEKGAREGNKAAGPVGGVLGGAIGGVVGVVTGVTGVLTG 78 AA V L A+ AQ +VQGVE+GAR GNKAAGPVGGVLGGAIGGVVGVV GV +TG Sbjct: 19 AALVGLAALQPPAQAQGLVQGVEQGARAGNKAAGPVGGVLGGAIGGVVGVVGGVLTGVTG 78 Query: 79 -NNGNNATGSGKNPQAPAAGAKASKSAKAAAKDKGPK--QAPTVLTQAGAPQLTAEQIVA 135 N G+ + AP AK ++ + AK K AP V QLTAEQ+VA Sbjct: 79 GNTARGPVGAAREQTAPPRSAKEARKQEREAKRKAKSGTAAPVV-------QLTAEQMVA 131 Query: 136 NSDANIERIKKELNLTPEQEKNWAGFNSAMHYLGHNGADRLNLRIARAQRDPPDDIIEQM 195 NSDA+IERIK+EL+LTPEQEK+W F+SAMHYLG +GA+RL LR ARAQRDPPDDI+EQM Sbjct: 132 NSDAHIERIKRELSLTPEQEKHWGLFSSAMHYLGQHGAERLTLRKARAQRDPPDDIVEQM 191 Query: 196 RNEAQFLNDRAVDQRGVADAAEPLFASLDDKQKQIFINEMVRLSHERGLD 245 RNEAQFL DR DQR VADAAEPL+ASLDDKQK F+ EMVRLS ERGLD Sbjct: 192 RNEAQFLYDRGADQRAVADAAEPLYASLDDKQKAFFVAEMVRLSTERGLD 241 >ref|YP_486764.1| hypothetical protein RPB_3157 [Rhodopseudomonas palustris HaA2] gb|ABD07853.1| hypothetical protein RPB_3157 [Rhodopseudomonas palustris HaA2] Length = 199 Score = 213 bits (541), Expect = 3e-53, Method: Compositional matrix adjust. Identities = 137/207 (66%), Positives = 152/207 (73%), Gaps = 9/207 (4%) Query: 40 VEKGAREGNKAAGPVGGVLGGAIGGVVGVVTGVTGVLTG-NNGNNATGSGKNPQAPAAGA 98 +E+GAR GNKAAGPVGGVLGGAIGGVVGVV GV +TG N G+ + P A Sbjct: 1 MEQGARAGNKAAGPVGGVLGGAIGGVVGVVGGVLTGVTGGNTARGPVGAKQQTGEPQKSA 60 Query: 99 KASKSAKAAAKDKGPKQAPTVLTQAGAPQLTAEQIVANSDANIERIKKELNLTPEQEKNW 158 K ++ AK K AP +LT EQIVANSDANIERIK EL LTPEQEK+W Sbjct: 61 KQTRKEARDAKAGKGKAAPA--------ELTPEQIVANSDANIERIKSELKLTPEQEKHW 112 Query: 159 AGFNSAMHYLGHNGADRLNLRIARAQRDPPDDIIEQMRNEAQFLNDRAVDQRGVADAAEP 218 F+SAMHYLG +GA+RL LR ARAQRDPPDDI+EQMRNEAQFL DR DQR VADAAEP Sbjct: 113 GQFSSAMHYLGQHGAERLTLRKARAQRDPPDDIVEQMRNEAQFLYDRGADQRAVADAAEP 172 Query: 219 LFASLDDKQKQIFINEMVRLSHERGLD 245 LFA+LDDKQK IF+ EMVRLS ERGLD Sbjct: 173 LFATLDDKQKAIFVTEMVRLSTERGLD 199