BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0015.p (303 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001205806.1| ABC transporter permease [Bradyrhizobium sp.... 557 e-157 ref|YP_001240088.1| ABC transporter permease [Bradyrhizobium sp.... 557 e-157 ref|YP_486163.1| binding-protein dependent transport system inne... 550 e-155 ref|YP_570037.1| binding-protein-dependent transport systems inn... 543 e-152 ref|NP_771196.1| ABC transporter permease protein [Bradyrhizobiu... 536 e-150 >ref|YP_001205806.1| ABC transporter permease [Bradyrhizobium sp. ORS 278] emb|CAL77581.1| ABC transporter permease protein [Bradyrhizobium sp. ORS 278] Length = 303 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/303 (91%), Positives = 289/303 (95%) Query: 1 MSSLTIDKSGPTRKVKYGSMSRDRAWALRWSYFFLVLFAIFSLTPPIYMLITSLKSSAEI 60 MS+LT+DK+GPTR VK+GSMSRDRAWALRWSYFFLVLFAIFSL PP YMLITSLKSSAEI Sbjct: 1 MSTLTVDKAGPTRTVKHGSMSRDRAWALRWSYFFLVLFAIFSLVPPFYMLITSLKSSAEI 60 Query: 61 SAATNPWWVYHPTLSNYIELLTSNQFLRFFWNSAWVSIIVVTITMLISVPAAFALARMKF 120 SAATNPWWV+HPTLSNY+ELL+SNQFLRFFWNSA VS+IVV +TMLIS+PAAFALARMKF Sbjct: 61 SAATNPWWVFHPTLSNYVELLSSNQFLRFFWNSAMVSVIVVIVTMLISIPAAFALARMKF 120 Query: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMFAVFGDWTGIQLVNRWYVLLFIYPTLTVPFCT 180 WGSATLATGVFLTYLIPDSLLFIPLFKM AV D TGI L+NRWYVLLFIYPTLTVPFCT Sbjct: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMLAVVQDLTGITLLNRWYVLLFIYPTLTVPFCT 180 Query: 181 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 WIMIGYFASIPKELDEAAIIDGASW QTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL Sbjct: 181 WIMIGYFASIPKELDEAAIIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 Query: 241 VFTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 V TTS DQLVLPVGI TTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA Sbjct: 241 VLTTSVDQLVLPVGITTTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 Query: 301 TKG 303 TKG Sbjct: 301 TKG 303 >ref|YP_001240088.1| ABC transporter permease [Bradyrhizobium sp. BTAi1] gb|ABQ36182.1| carbohydrate ABC transporter membrane protein 2, CUT1 family [Bradyrhizobium sp. BTAi1] Length = 303 Score = 557 bits (1436), Expect = e-157, Method: Compositional matrix adjust. Identities = 278/303 (91%), Positives = 290/303 (95%) Query: 1 MSSLTIDKSGPTRKVKYGSMSRDRAWALRWSYFFLVLFAIFSLTPPIYMLITSLKSSAEI 60 MS++T+DK+GPTR VKYGSMSRDRAWALRWSYFFL LFAIFSL PP+YMLITSLK SAEI Sbjct: 1 MSTMTVDKAGPTRTVKYGSMSRDRAWALRWSYFFLTLFAIFSLVPPLYMLITSLKGSAEI 60 Query: 61 SAATNPWWVYHPTLSNYIELLTSNQFLRFFWNSAWVSIIVVTITMLISVPAAFALARMKF 120 SAATNPWWV+HPTL NY LLTSNQFLRFF+NSA VSIIVV ITMLIS+PAAFAL+RMKF Sbjct: 61 SAATNPWWVFHPTLENYAGLLTSNQFLRFFFNSAMVSIIVVIITMLISIPAAFALSRMKF 120 Query: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMFAVFGDWTGIQLVNRWYVLLFIYPTLTVPFCT 180 WGSATLATGVFLTYLIPDSLLFIPLFKMFA+ GD TGIQL+NRWYVLLFIYPTLTVPFCT Sbjct: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMFALIGDVTGIQLINRWYVLLFIYPTLTVPFCT 180 Query: 181 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 WIMIGYFASIPKELDEAAIIDGASW QTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL Sbjct: 181 WIMIGYFASIPKELDEAAIIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 Query: 241 VFTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 VFTTS DQLVLPVGI+TTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA Sbjct: 241 VFTTSADQLVLPVGIVTTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 Query: 301 TKG 303 TKG Sbjct: 301 TKG 303 >ref|YP_486163.1| binding-protein dependent transport system inner membrane protein [Rhodopseudomonas palustris HaA2] gb|ABD07252.1| Binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris HaA2] Length = 304 Score = 550 bits (1418), Expect = e-155, Method: Compositional matrix adjust. Identities = 275/302 (91%), Positives = 288/302 (95%) Query: 2 SSLTIDKSGPTRKVKYGSMSRDRAWALRWSYFFLVLFAIFSLTPPIYMLITSLKSSAEIS 61 S+LTIDK+ P R YGSMSRDRAWAL+WSYFFL +FAIFSL PP+YMLITSLKSS EIS Sbjct: 3 STLTIDKAAPRRNPGYGSMSRDRAWALKWSYFFLTIFAIFSLVPPLYMLITSLKSSQEIS 62 Query: 62 AATNPWWVYHPTLSNYIELLTSNQFLRFFWNSAWVSIIVVTITMLISVPAAFALARMKFW 121 AATNPWWV+HPTL NYI+LLTSNQFL FF+NSA VSI VVTITMLISVPAAFALARM+FW Sbjct: 63 AATNPWWVFHPTLGNYIQLLTSNQFLTFFFNSAMVSIFVVTITMLISVPAAFALARMRFW 122 Query: 122 GSATLATGVFLTYLIPDSLLFIPLFKMFAVFGDWTGIQLVNRWYVLLFIYPTLTVPFCTW 181 GSATLATGVFLTYLIPD+LLFIPLFKMFA FGDW+GIQL+NRWYVLL IYPTLTVPFCTW Sbjct: 123 GSATLATGVFLTYLIPDTLLFIPLFKMFATFGDWSGIQLINRWYVLLIIYPTLTVPFCTW 182 Query: 182 IMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPLV 241 IMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPG+IAATIFAFTVSWAQFLYPLV Sbjct: 183 IMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGIIAATIFAFTVSWAQFLYPLV 242 Query: 242 FTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGAT 301 FTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGAT Sbjct: 243 FTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGAT 302 Query: 302 KG 303 KG Sbjct: 303 KG 304 >ref|YP_570037.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] gb|ABE40136.1| binding-protein-dependent transport systems inner membrane component [Rhodopseudomonas palustris BisB5] Length = 303 Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust. Identities = 270/303 (89%), Positives = 286/303 (94%) Query: 1 MSSLTIDKSGPTRKVKYGSMSRDRAWALRWSYFFLVLFAIFSLTPPIYMLITSLKSSAEI 60 M++LTIDK+GP R YGSMSRDRAWAL+WSY FL +FA FSL PP+YMLITSLKSS EI Sbjct: 1 MATLTIDKTGPRRNPAYGSMSRDRAWALKWSYVFLTIFAAFSLVPPLYMLITSLKSSREI 60 Query: 61 SAATNPWWVYHPTLSNYIELLTSNQFLRFFWNSAWVSIIVVTITMLISVPAAFALARMKF 120 SAATNPWWV+HPTL NYI+LLTSNQFL FF+NSA VSI VVTITMLISVPAAFALARM+F Sbjct: 61 SAATNPWWVFHPTLDNYIQLLTSNQFLTFFFNSAMVSIFVVTITMLISVPAAFALARMRF 120 Query: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMFAVFGDWTGIQLVNRWYVLLFIYPTLTVPFCT 180 WGSATLATGVFLTYLIPD+LLFIPLFKMFA FGDW+GI L+NRWYVLL IYPTLTVPFCT Sbjct: 121 WGSATLATGVFLTYLIPDTLLFIPLFKMFASFGDWSGIPLINRWYVLLIIYPTLTVPFCT 180 Query: 181 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVA+PG+IAATIFAFTVSWAQFLYPL Sbjct: 181 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVAMPGIIAATIFAFTVSWAQFLYPL 240 Query: 241 VFTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 VFTTS DQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYY+AGLTAGA Sbjct: 241 VFTTSVDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYVAGLTAGA 300 Query: 301 TKG 303 TKG Sbjct: 301 TKG 303 >ref|NP_771196.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] dbj|BAC49821.1| ABC transporter permease protein [Bradyrhizobium japonicum USDA 110] Length = 303 Score = 536 bits (1380), Expect = e-150, Method: Compositional matrix adjust. Identities = 272/303 (89%), Positives = 290/303 (95%) Query: 1 MSSLTIDKSGPTRKVKYGSMSRDRAWALRWSYFFLVLFAIFSLTPPIYMLITSLKSSAEI 60 MS+L IDK+GP+RKVK GSMSRDR WALRWSYFFLVLFAIF LTPP+YMLITSLKSSAEI Sbjct: 1 MSTLAIDKAGPSRKVKLGSMSRDRTWALRWSYFFLVLFAIFFLTPPVYMLITSLKSSAEI 60 Query: 61 SAATNPWWVYHPTLSNYIELLTSNQFLRFFWNSAWVSIIVVTITMLISVPAAFALARMKF 120 SAATNPWWV+HPTL+NY+ELLTSNQFLRFFWNS+ +SI+VV +TMLIS+PAAFALARMKF Sbjct: 61 SAATNPWWVFHPTLANYVELLTSNQFLRFFWNSSIISIVVVIVTMLISIPAAFALARMKF 120 Query: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMFAVFGDWTGIQLVNRWYVLLFIYPTLTVPFCT 180 WGSATLATGVFLTYLIPDSLLFIPLFKM AV ++TGI L+NRWYVL+FIYPTLTVPFCT Sbjct: 121 WGSATLATGVFLTYLIPDSLLFIPLFKMLAVVQEFTGIPLLNRWYVLVFIYPTLTVPFCT 180 Query: 181 WIMIGYFASIPKELDEAAIIDGASWFQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 WIMIGYFASIPKELDEAA+IDGASW QTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL Sbjct: 181 WIMIGYFASIPKELDEAALIDGASWLQTLTRIFIPVALPGLIAATIFAFTVSWAQFLYPL 240 Query: 241 VFTTSTDQLVLPVGIITTLIKGDVFNWGQIMTGALLGAAPPLIIYAFLMDYYIAGLTAGA 300 VFTTS DQLVLPVGI TTLIKGDVFNWGQIMTGALLGAAPPL+IYAFLMDYYIAGLTAGA Sbjct: 241 VFTTSIDQLVLPVGITTTLIKGDVFNWGQIMTGALLGAAPPLVIYAFLMDYYIAGLTAGA 300 Query: 301 TKG 303 TKG Sbjct: 301 TKG 303