BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0164.0012.p         (198 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_004108791.1| amidase [Rhodopseudomonas palustris DX-1] >g...   214   4e-54
ref|NP_948315.1| putative 6-aminohexanoate-cyclic-dimer hydrolas...   213   1e-53
ref|YP_001992299.1| Amidase [Rhodopseudomonas palustris TIE-1] >...   212   2e-53
ref|YP_486166.1| amidase [Rhodopseudomonas palustris HaA2] >gi|8...   210   8e-53
ref|YP_570034.1| amidase [Rhodopseudomonas palustris BisB5] >gi|...   205   4e-51

>ref|YP_004108791.1| amidase [Rhodopseudomonas palustris DX-1]
 gb|ADU44058.1| Amidase [Rhodopseudomonas palustris DX-1]
          Length = 476

 Score =  214 bits (546), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 117/139 (84%)

Query: 1   MAFKEFGNYDAVGLAELVRNKDVTPKELLDEAIARTAAVDPKINAVVVKHYDYAERQIAK 60
           MAFKE+G+YD VGLAELVR+K VT  ELLDEAIART A+DPK+NAVVV+H DYA  QI  
Sbjct: 1   MAFKEYGDYDGVGLAELVRSKQVTADELLDEAIARTDALDPKLNAVVVRHDDYARNQIEA 60

Query: 61  GLPDGPFTGVPFLLKDLDLLEGTRTTSGASLLKDFVADHNGTLAQRFLDAGLAIFGKSSS 120
           GLP GPFTGVPFLLKDLDLL GTRTT GASL KDFVA H GTLAQRFL+AG+ +FGKS+S
Sbjct: 61  GLPQGPFTGVPFLLKDLDLLAGTRTTFGASLYKDFVAPHTGTLAQRFLNAGVTVFGKSAS 120

Query: 121 PEFGLMPTTESRLFGXQRR 139
           PE GLMPTTESRL G  R 
Sbjct: 121 PELGLMPTTESRLHGPTRN 139


>ref|NP_948315.1| putative 6-aminohexanoate-cyclic-dimer hydrolase [Rhodopseudomonas
           palustris CGA009]
 emb|CAE28415.1| putative 6-aminohexanoate-cyclic-dimer hydrolase [Rhodopseudomonas
           palustris CGA009]
          Length = 476

 Score =  213 bits (543), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 116/139 (83%)

Query: 1   MAFKEFGNYDAVGLAELVRNKDVTPKELLDEAIARTAAVDPKINAVVVKHYDYAERQIAK 60
           MAFKE+G+YD VGLAELVR+K VT  ELLDEAIART A+DP +NAVVV+H DYA +QI  
Sbjct: 1   MAFKEYGDYDGVGLAELVRSKQVTAAELLDEAIARTDALDPTLNAVVVRHDDYARKQIEA 60

Query: 61  GLPDGPFTGVPFLLKDLDLLEGTRTTSGASLLKDFVADHNGTLAQRFLDAGLAIFGKSSS 120
           GLP GPFTGVPFLLKDLDLL GTRTT GASL KDFVA H GTLA RFL AG+ IFGKS+S
Sbjct: 61  GLPQGPFTGVPFLLKDLDLLAGTRTTFGASLYKDFVAPHTGTLAGRFLAAGVTIFGKSAS 120

Query: 121 PEFGLMPTTESRLFGXQRR 139
           PEFGLMPTTESRL G  R 
Sbjct: 121 PEFGLMPTTESRLHGPTRN 139


>ref|YP_001992299.1| Amidase [Rhodopseudomonas palustris TIE-1]
 gb|ACF01824.1| Amidase [Rhodopseudomonas palustris TIE-1]
          Length = 476

 Score =  212 bits (540), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 116/139 (83%)

Query: 1   MAFKEFGNYDAVGLAELVRNKDVTPKELLDEAIARTAAVDPKINAVVVKHYDYAERQIAK 60
           MAFKE+G+YD VGLAELVR+K VT  ELLDEAIART A+DPK+NAVVV+H DYA +QI  
Sbjct: 1   MAFKEYGDYDGVGLAELVRSKQVTAVELLDEAIARTDALDPKLNAVVVRHDDYARKQIEA 60

Query: 61  GLPDGPFTGVPFLLKDLDLLEGTRTTSGASLLKDFVADHNGTLAQRFLDAGLAIFGKSSS 120
           GLP GPFTGVPFLLKDLDLL GT TT GASL KDFVA H GTLA RFL AG+ IFGKS+S
Sbjct: 61  GLPQGPFTGVPFLLKDLDLLAGTCTTFGASLYKDFVAPHTGTLAGRFLAAGVTIFGKSAS 120

Query: 121 PEFGLMPTTESRLFGXQRR 139
           PEFGLMPTTESRL G  R 
Sbjct: 121 PEFGLMPTTESRLHGPTRN 139


>ref|YP_486166.1| amidase [Rhodopseudomonas palustris HaA2]
 gb|ABD07255.1| Amidase [Rhodopseudomonas palustris HaA2]
          Length = 474

 Score =  210 bits (535), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 107/139 (76%), Positives = 117/139 (84%)

Query: 1   MAFKEFGNYDAVGLAELVRNKDVTPKELLDEAIARTAAVDPKINAVVVKHYDYAERQIAK 60
           MAFK++ +YD VGLAELVR K VTP ELL+EAIART A+DPK+NAVVV+H D A RQI K
Sbjct: 1   MAFKDYSDYDGVGLAELVRRKQVTPGELLEEAIARTDALDPKLNAVVVRHDDDARRQIDK 60

Query: 61  GLPDGPFTGVPFLLKDLDLLEGTRTTSGASLLKDFVADHNGTLAQRFLDAGLAIFGKSSS 120
           GLPDGPFTGVPFLLKDLDLL GTRTT GASL KDFVA H GTLA RFL +G+ IFGKS+S
Sbjct: 61  GLPDGPFTGVPFLLKDLDLLAGTRTTFGASLYKDFVAPHTGTLAGRFLASGVTIFGKSAS 120

Query: 121 PEFGLMPTTESRLFGXQRR 139
           PEFGLMPTTESRL G  R 
Sbjct: 121 PEFGLMPTTESRLHGPTRN 139


>ref|YP_570034.1| amidase [Rhodopseudomonas palustris BisB5]
 gb|ABE40133.1| Amidase [Rhodopseudomonas palustris BisB5]
          Length = 474

 Score =  205 bits (521), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 102/139 (73%), Positives = 116/139 (83%)

Query: 1   MAFKEFGNYDAVGLAELVRNKDVTPKELLDEAIARTAAVDPKINAVVVKHYDYAERQIAK 60
           MA K++  +D VGLAELVRNK V+ +ELLDEAIART A+D K+NAVVV+H DYA +QI  
Sbjct: 1   MAIKDYSEHDGVGLAELVRNKQVSARELLDEAIARTDALDGKLNAVVVRHDDYARQQIEA 60

Query: 61  GLPDGPFTGVPFLLKDLDLLEGTRTTSGASLLKDFVADHNGTLAQRFLDAGLAIFGKSSS 120
           GLPDGPFTGVPFLLKDLDLL GT+TT GAS+ KDFVA H GTLAQRFL AG+ I+GKS+S
Sbjct: 61  GLPDGPFTGVPFLLKDLDLLAGTKTTFGASVYKDFVAPHTGTLAQRFLAAGVTIYGKSAS 120

Query: 121 PEFGLMPTTESRLFGXQRR 139
           PEFGLMPTTESRL G  R 
Sbjct: 121 PEFGLMPTTESRLHGPTRN 139