BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0164.0006.p         (102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771202.1| hypothetical protein blr4562 [Bradyrhizobium ja...   179   9e-44
ref|YP_001205794.1| putative signal peptide [Bradyrhizobium sp. ...   178   2e-43
ref|YP_001240098.1| hypothetical protein BBta_4129 [Bradyrhizobi...   174   5e-42
ref|YP_569769.1| hypothetical protein RPD_2639 [Rhodopseudomonas...   168   2e-40
ref|YP_486442.1| hypothetical protein RPB_2829 [Rhodopseudomonas...   162   2e-38

>ref|NP_771202.1| hypothetical protein blr4562 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC49827.1| blr4562 [Bradyrhizobium japonicum USDA 110]
          Length = 299

 Score =  179 bits (455), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 85/99 (85%), Positives = 89/99 (89%), Gaps = 1/99 (1%)

Query: 5   NSPLGVWLTEEKEGKIRIEQCGANLCGDTVDRKSNANGEQVLINMKPAKD-KWSGRIFDP 63
           NSPLG+WLTEEKEGK+RIEQCG NLCG +VD KSN NGEQVLINMKP KD KWSGRI DP
Sbjct: 201 NSPLGIWLTEEKEGKVRIEQCGNNLCGYSVDSKSNQNGEQVLINMKPGKDQKWSGRILDP 260

Query: 64  NSGSTYDSTIAMKSPDTLRVQGCAFGGMFCGGQTWTRVN 102
           N+GSTYDSTIAMK  D LRVQGCAFGGMFCGGQTWTRVN
Sbjct: 261 NTGSTYDSTIAMKGTDRLRVQGCAFGGMFCGGQTWTRVN 299


>ref|YP_001205794.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL77569.1| conserved hypothetical protein; putative signal peptide
           [Bradyrhizobium sp. ORS 278]
          Length = 318

 Score =  178 bits (452), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 81/104 (77%), Positives = 93/104 (89%), Gaps = 2/104 (1%)

Query: 1   VQAANSPLGVWLTEEKEGKIRIEQCGANLCGDTVDRKSNANGEQVLINMKP--AKDKWSG 58
           V+  NSP+G+WLTEEKEGKIRIE CGANLCG ++D K+N NGEQ+LINM+P   + KWSG
Sbjct: 215 VRDQNSPVGIWLTEEKEGKIRIEPCGANLCGYSIDAKTNQNGEQILINMRPNDKEKKWSG 274

Query: 59  RIFDPNSGSTYDSTIAMKSPDTLRVQGCAFGGMFCGGQTWTRVN 102
           RIFDP+SGSTYDSTIA+K PD+LRVQGCAFGGMFCGGQTWTRVN
Sbjct: 275 RIFDPSSGSTYDSTIALKGPDSLRVQGCAFGGMFCGGQTWTRVN 318


>ref|YP_001240098.1| hypothetical protein BBta_4129 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36192.1| putative exported protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 300

 Score =  174 bits (440), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 80/105 (76%), Positives = 92/105 (87%), Gaps = 4/105 (3%)

Query: 2   QAANSPLGVWLTEEKEGKIRIEQCGANLCGDTVDRKSNANGEQVLINMKPA----KDKWS 57
           Q  NSP+G+WLTEEKEGKIRIE CGANLCG ++D K+N NGEQ+LINM+P+    + KWS
Sbjct: 196 QDPNSPIGIWLTEEKEGKIRIEPCGANLCGYSIDAKTNQNGEQILINMRPSDKSQEKKWS 255

Query: 58  GRIFDPNSGSTYDSTIAMKSPDTLRVQGCAFGGMFCGGQTWTRVN 102
           GRIFDPNSGSTYDSTIA+K  ++LRVQGCAFGGMFCGGQTWTRVN
Sbjct: 256 GRIFDPNSGSTYDSTIALKGSNSLRVQGCAFGGMFCGGQTWTRVN 300


>ref|YP_569769.1| hypothetical protein RPD_2639 [Rhodopseudomonas palustris BisB5]
 gb|ABE39868.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 283

 Score =  168 bits (426), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/98 (78%), Positives = 87/98 (88%), Gaps = 1/98 (1%)

Query: 6   SPLGVWLTEEKEGKIRIEQCGANLCGDTVDRKSNANGEQVLINMKPAKD-KWSGRIFDPN 64
           SPLGVWLTEEKEGK+RIEQCGA+LCG +V+ +SN NGE++LINMKP  D KWSGRI DP 
Sbjct: 186 SPLGVWLTEEKEGKVRIEQCGASLCGYSVNARSNENGEKILINMKPGGDNKWSGRIHDPK 245

Query: 65  SGSTYDSTIAMKSPDTLRVQGCAFGGMFCGGQTWTRVN 102
           SGS YDSTIA+K PD L+VQGCAFGGMFCGGQTW+RVN
Sbjct: 246 SGSNYDSTIALKGPDRLKVQGCAFGGMFCGGQTWSRVN 283


>ref|YP_486442.1| hypothetical protein RPB_2829 [Rhodopseudomonas palustris HaA2]
 gb|ABD07531.1| conserved hypothetical protein [Rhodopseudomonas palustris HaA2]
          Length = 280

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 74/97 (76%), Positives = 84/97 (86%), Gaps = 1/97 (1%)

Query: 6   SPLGVWLTEEKEGKIRIEQCGANLCGDTVDRKSNANGEQVLINMKPAKD-KWSGRIFDPN 64
           SPLG+WLTEEKEGKIRIE CG +LCG +V+ KSN NGE++LINMK   D KWSGRI+DP 
Sbjct: 183 SPLGIWLTEEKEGKIRIEPCGEHLCGYSVNAKSNQNGEKILINMKSGGDNKWSGRIYDPK 242

Query: 65  SGSTYDSTIAMKSPDTLRVQGCAFGGMFCGGQTWTRV 101
           SGS YDSTIA++ PD L+VQGCAFGGMFCGGQTWTRV
Sbjct: 243 SGSRYDSTIALRGPDRLKVQGCAFGGMFCGGQTWTRV 279