BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0164.0005.p         (134 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240099.1| hypothetical protein BBta_4130 [Bradyrhizobi...   239   1e-61
ref|YP_569768.1| cupin 2 barrel domain-containing protein [Rhodo...   219   1e-55
ref|YP_486443.1| cupin region [Rhodopseudomonas palustris HaA2] ...   216   1e-54
ref|YP_532495.1| cupin 2 barrel domain-containing protein [Rhodo...   211   2e-53
ref|YP_001205793.1| hypothetical protein BRADO3800 [Bradyrhizobi...   206   8e-52

>ref|YP_001240099.1| hypothetical protein BBta_4130 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36193.1| hypothetical protein BBta_4130 [Bradyrhizobium sp. BTAi1]
          Length = 134

 Score =  239 bits (610), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 114/134 (85%), Positives = 120/134 (89%)

Query: 1   MDIHVSGSRPTRRAPKENFTGTVLQDPINMAPAPARLNASRVSFEPGARTAWHTHPLGQT 60
           MD H +GSR TRRAP E FTG VLQDP+ MAPAPARLNASRVSF PGARTAWHTHPLGQT
Sbjct: 1   MDFHPAGSRATRRAPAEYFTGNVLQDPLIMAPAPARLNASRVSFAPGARTAWHTHPLGQT 60

Query: 61  LYVISGIGRVQAKGGPIREIRPGDVVWIPPNEKHWHGASPDNSMTHIAMQEALDGVYSTW 120
           LYVISGIGR+QAKGGP+REIRPGDV++IPP EKHWHGASPDN MTHIAMQEALDGVYS W
Sbjct: 61  LYVISGIGRIQAKGGPVREIRPGDVIFIPPGEKHWHGASPDNEMTHIAMQEALDGVYSNW 120

Query: 121 MEHVTDEEYNGKVG 134
           MEHVTDEEY   VG
Sbjct: 121 MEHVTDEEYATPVG 134


>ref|YP_569768.1| cupin 2 barrel domain-containing protein [Rhodopseudomonas
           palustris BisB5]
 gb|ABE39867.1| Cupin 2, conserved barrel [Rhodopseudomonas palustris BisB5]
          Length = 135

 Score =  219 bits (558), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 102/129 (79%), Positives = 114/129 (88%)

Query: 1   MDIHVSGSRPTRRAPKENFTGTVLQDPINMAPAPARLNASRVSFEPGARTAWHTHPLGQT 60
           MDI  +GSRPT RAPK+ FTGTV QDPI  APAPARL A+RV+FEPGARTAWHTHPLGQT
Sbjct: 1   MDIFSAGSRPTLRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQT 60

Query: 61  LYVISGIGRVQAKGGPIREIRPGDVVWIPPNEKHWHGASPDNSMTHIAMQEALDGVYSTW 120
           LYV++GIGRVQ +GGP+REIR GDVVWIPP EKHWHGASP N MTHIAMQEALDG ++TW
Sbjct: 61  LYVVTGIGRVQTEGGPVREIRAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATW 120

Query: 121 MEHVTDEEY 129
           MEHV+D +Y
Sbjct: 121 MEHVSDADY 129


>ref|YP_486443.1| cupin region [Rhodopseudomonas palustris HaA2]
 gb|ABD07532.1| Cupin region [Rhodopseudomonas palustris HaA2]
          Length = 135

 Score =  216 bits (550), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 99/129 (76%), Positives = 115/129 (89%)

Query: 1   MDIHVSGSRPTRRAPKENFTGTVLQDPINMAPAPARLNASRVSFEPGARTAWHTHPLGQT 60
           MDI V+GSRPT+RAPK+ FTGTV QDPI  APAPARL A+RV+FEPGARTAWHTHPLGQT
Sbjct: 1   MDIFVAGSRPTQRAPKDYFTGTVWQDPIVSAPAPARLAATRVAFEPGARTAWHTHPLGQT 60

Query: 61  LYVISGIGRVQAKGGPIREIRPGDVVWIPPNEKHWHGASPDNSMTHIAMQEALDGVYSTW 120
           LYV++G+GR+Q +GGP+REI+ GDVVWIPP EKHWHGASP N MTHIAMQEALDG ++TW
Sbjct: 61  LYVVTGLGRIQTEGGPVREIKAGDVVWIPPGEKHWHGASPTNGMTHIAMQEALDGSFATW 120

Query: 121 MEHVTDEEY 129
           ME V+D +Y
Sbjct: 121 MEPVSDADY 129


>ref|YP_532495.1| cupin 2 barrel domain-containing protein [Rhodopseudomonas
           palustris BisB18]
 gb|ABD88176.1| Cupin 2, conserved barrel [Rhodopseudomonas palustris BisB18]
          Length = 135

 Score =  211 bits (538), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 98/133 (73%), Positives = 111/133 (83%)

Query: 1   MDIHVSGSRPTRRAPKENFTGTVLQDPINMAPAPARLNASRVSFEPGARTAWHTHPLGQT 60
           M+I+ +GSRPTRRAP E FTGTV QD I  APAPARL A+RV+FEPGART WHTHPLGQT
Sbjct: 1   MEIYQAGSRPTRRAPPEYFTGTVWQDAIVAAPAPARLMATRVAFEPGARTNWHTHPLGQT 60

Query: 61  LYVISGIGRVQAKGGPIREIRPGDVVWIPPNEKHWHGASPDNSMTHIAMQEALDGVYSTW 120
           LYV+ G+GRVQ  GGP+REIR GD VWIPP EKHWHGA+P NSMTHIAMQEALDG ++TW
Sbjct: 61  LYVVEGVGRVQLDGGPLREIRAGDTVWIPPGEKHWHGAAPGNSMTHIAMQEALDGSFATW 120

Query: 121 MEHVTDEEYNGKV 133
           +E V+D EYN   
Sbjct: 121 LEQVSDAEYNANA 133


>ref|YP_001205793.1| hypothetical protein BRADO3800 [Bradyrhizobium sp. ORS 278]
 emb|CAL77568.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 137

 Score =  206 bits (525), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 95/134 (70%), Positives = 113/134 (84%)

Query: 1   MDIHVSGSRPTRRAPKENFTGTVLQDPINMAPAPARLNASRVSFEPGARTAWHTHPLGQT 60
           +D++++GSRPTRRA  E+FTGTV QDPI    APAR+ ++RV+FEPGARTAWHTHPLGQT
Sbjct: 4   VDVYLAGSRPTRRAAAESFTGTVWQDPIITPQAPARVASARVAFEPGARTAWHTHPLGQT 63

Query: 61  LYVISGIGRVQAKGGPIREIRPGDVVWIPPNEKHWHGASPDNSMTHIAMQEALDGVYSTW 120
           LYVI G+GRVQAKGGP+REI+ GDVVWIPP EKHWHGA+P   M H+AM E+L+G + TW
Sbjct: 64  LYVIQGVGRVQAKGGPVREIKAGDVVWIPPGEKHWHGAAPTTGMVHVAMHESLNGEHVTW 123

Query: 121 MEHVTDEEYNGKVG 134
           MEHVTDEEY   VG
Sbjct: 124 MEHVTDEEYATPVG 137