BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0164.0003.p         (148 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001240100.1| hypothetical protein BBta_4131 [Bradyrhizobi...   262   1e-68
ref|YP_001205792.1| hypothetical protein BRADO3799 [Bradyrhizobi...   258   1e-67
ref|YP_002289173.1| dimethylmenaquinone methyltransferase [Oligo...   253   6e-66
ref|ZP_07027102.1| Dimethylmenaquinone methyltransferase [Afipia...   252   1e-65
ref|YP_569767.1| hypothetical protein RPD_2637 [Rhodopseudomonas...   248   3e-64

>ref|YP_001240100.1| hypothetical protein BBta_4131 [Bradyrhizobium sp. BTAi1]
 gb|ABQ36194.1| hypothetical protein BBta_4131 [Bradyrhizobium sp. BTAi1]
          Length = 232

 Score =  262 bits (669), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 128/139 (92%), Positives = 134/139 (96%)

Query: 1   MSLSAEAIATLSHVSTATITTVLLKKGLRNIWMRGTKPLKPGQKRLVGPAFTLRFVPARE 60
           MSL+ EAIATLS V+TATITTVLLKKGLRN+WMRG KPL+PGQKRLVGPAFTLRFVPARE
Sbjct: 1   MSLTPEAIATLSQVTTATITTVLLKKGLRNVWMRGAKPLRPGQKRLVGPAFTLRFVPARE 60

Query: 61  DLATPESWSSPISTRTAIEAMPAGCIAVVDAMGITDAGIFGDILCARMVKRGVTALITDG 120
           DLATPESWSSPISTRTAIEAMP GCIAVVDAMG+ DAGIFGDILCARMVKRGVTALITDG
Sbjct: 61  DLATPESWSSPISTRTAIEAMPEGCIAVVDAMGVKDAGIFGDILCARMVKRGVTALITDG 120

Query: 121 VVRDVEGVLGTGLPVWCDG 139
           VVRD+EGVLGTGLPVWCDG
Sbjct: 121 VVRDLEGVLGTGLPVWCDG 139


>ref|YP_001205792.1| hypothetical protein BRADO3799 [Bradyrhizobium sp. ORS 278]
 emb|CAL77567.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 232

 Score =  258 bits (660), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 125/139 (89%), Positives = 134/139 (96%)

Query: 1   MSLSAEAIATLSHVSTATITTVLLKKGLRNIWMRGTKPLKPGQKRLVGPAFTLRFVPARE 60
           MSL+ EAIATLS V+TATITTVLLKKGLRN+WMRG +PL+PGQKRLVGPAFTLRFVPARE
Sbjct: 1   MSLTPEAIATLSQVTTATITTVLLKKGLRNVWMRGARPLRPGQKRLVGPAFTLRFVPARE 60

Query: 61  DLATPESWSSPISTRTAIEAMPAGCIAVVDAMGITDAGIFGDILCARMVKRGVTALITDG 120
           DLATPESWSSPISTRTAIEAMP GCIAVVDAMG+ +AGIFGDILCARMVKRGVTALITDG
Sbjct: 61  DLATPESWSSPISTRTAIEAMPEGCIAVVDAMGVKNAGIFGDILCARMVKRGVTALITDG 120

Query: 121 VVRDVEGVLGTGLPVWCDG 139
           VVRD+EGV+GTGLPVWCDG
Sbjct: 121 VVRDLEGVMGTGLPVWCDG 139


>ref|YP_002289173.1| dimethylmenaquinone methyltransferase [Oligotropha carboxidovorans
           OM5]
 ref|YP_004632791.1| demethylmenaquinone [Oligotropha carboxidovorans OM5]
 gb|ACI93308.1| dimethylmenaquinone methyltransferase [Oligotropha carboxidovorans
           OM5]
 gb|AEI02974.1| putative demethylmenaquinone [Oligotropha carboxidovorans OM4]
 gb|AEI06550.1| putative demethylmenaquinone [Oligotropha carboxidovorans OM5]
          Length = 235

 Score =  253 bits (646), Expect = 6e-66,   Method: Compositional matrix adjust.
 Identities = 122/139 (87%), Positives = 131/139 (94%)

Query: 1   MSLSAEAIATLSHVSTATITTVLLKKGLRNIWMRGTKPLKPGQKRLVGPAFTLRFVPARE 60
           M+LSAE +  L  +STATITTVLLKKGLRN+WMRGT+PL+PGQKRLVGPAFTLRFVPARE
Sbjct: 1   MALSAETVQLLQRISTATITTVLLKKGLRNVWMRGTRPLRPGQKRLVGPAFTLRFVPARE 60

Query: 61  DLATPESWSSPISTRTAIEAMPAGCIAVVDAMGITDAGIFGDILCARMVKRGVTALITDG 120
           DLATPESWS PISTRTAIEAMP GCIAVVDAMGITDAGIFGDILC RM+KRGVTAL+TDG
Sbjct: 61  DLATPESWSKPISTRTAIEAMPEGCIAVVDAMGITDAGIFGDILCMRMMKRGVTALVTDG 120

Query: 121 VVRDVEGVLGTGLPVWCDG 139
           V+RDVEGVLGTGLPVWCDG
Sbjct: 121 VMRDVEGVLGTGLPVWCDG 139


>ref|ZP_07027102.1| Dimethylmenaquinone methyltransferase [Afipia sp. 1NLS2]
 gb|EFI51945.1| Dimethylmenaquinone methyltransferase [Afipia sp. 1NLS2]
          Length = 235

 Score =  252 bits (643), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 121/139 (87%), Positives = 129/139 (92%)

Query: 1   MSLSAEAIATLSHVSTATITTVLLKKGLRNIWMRGTKPLKPGQKRLVGPAFTLRFVPARE 60
           MSL AE +  L  +STATITTVLLKKGLRN+WMRGT+PL+PGQKRLVGPAFTLRFVPARE
Sbjct: 1   MSLPAETVQLLQRISTATITTVLLKKGLRNVWMRGTRPLRPGQKRLVGPAFTLRFVPARE 60

Query: 61  DLATPESWSSPISTRTAIEAMPAGCIAVVDAMGITDAGIFGDILCARMVKRGVTALITDG 120
           DLATPESWS PISTRTAIEAMP GCIAVVDAMG+TDAGIFGDILC RM KRGVTAL+TDG
Sbjct: 61  DLATPESWSKPISTRTAIEAMPEGCIAVVDAMGVTDAGIFGDILCMRMAKRGVTALVTDG 120

Query: 121 VVRDVEGVLGTGLPVWCDG 139
           V+RDVEGVLGTGLPVWCDG
Sbjct: 121 VMRDVEGVLGTGLPVWCDG 139


>ref|YP_569767.1| hypothetical protein RPD_2637 [Rhodopseudomonas palustris BisB5]
 gb|ABE39866.1| Dimethylmenaquinone methyltransferase [Rhodopseudomonas palustris
           BisB5]
          Length = 237

 Score =  248 bits (632), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 118/139 (84%), Positives = 132/139 (94%)

Query: 1   MSLSAEAIATLSHVSTATITTVLLKKGLRNIWMRGTKPLKPGQKRLVGPAFTLRFVPARE 60
           MSL+ EAIATL+ VSTATITTVLLKKGLRN+W+RG +PL+PGQ RLVG AFTLRFVPARE
Sbjct: 1   MSLTPEAIATLARVSTATITTVLLKKGLRNVWLRGARPLRPGQPRLVGEAFTLRFVPARE 60

Query: 61  DLATPESWSSPISTRTAIEAMPAGCIAVVDAMGITDAGIFGDILCARMVKRGVTALITDG 120
           DLATPESW+SPISTR AIEAMP GCIAV+DAMG++DAG+FGDILCARMVKRG+TALITDG
Sbjct: 61  DLATPESWASPISTRAAIEAMPEGCIAVIDAMGVSDAGVFGDILCARMVKRGITALITDG 120

Query: 121 VVRDVEGVLGTGLPVWCDG 139
           VVRD+EGVLGTGLPVWC+G
Sbjct: 121 VVRDLEGVLGTGLPVWCNG 139