BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0164.0001.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771206.1| hypothetical protein blr4566 [Bradyrhizobium ja... 363 9e-99 ref|YP_577298.1| hypothetical protein Nham_2040 [Nitrobacter ham... 345 2e-93 ref|ZP_01047330.1| hypothetical protein NB311A_19255 [Nitrobacte... 333 8e-90 ref|NP_948025.1| hypothetical protein RPA2683 [Rhodopseudomonas ... 333 1e-89 ref|YP_318114.1| hypothetical protein Nwi_1501 [Nitrobacter wino... 333 1e-89 >ref|NP_771206.1| hypothetical protein blr4566 [Bradyrhizobium japonicum USDA 110] dbj|BAC49831.1| blr4566 [Bradyrhizobium japonicum USDA 110] Length = 243 Score = 363 bits (933), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 175/222 (78%), Positives = 194/222 (87%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 VEFSRTIDDAAN+RVLALD+ +AA PI GITETVPTYRSLLVHYDP +I F+ALG ++L Sbjct: 20 VEFSRTIDDAANQRVLALDKALAASPIDGITETVPTYRSLLVHYDPGKIGFEALGEKILP 79 Query: 61 RAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGFT 120 A + P T TRRWRIPV YGGEHGIDLED+AKAL TTPD IVARHVAGDY+VAMIGFT Sbjct: 80 IATQPLPPATRTRRWRIPVAYGGEHGIDLEDIAKALSTTPDDIVARHVAGDYKVAMIGFT 139 Query: 121 PGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTYQ 180 PGWSYLSGL++ LHM RR++PRLLTPAGTISIGGIQ G+QCLA PSGWHLLGRTPVRTYQ Sbjct: 140 PGWSYLSGLDKSLHMSRRQNPRLLTPAGTISIGGIQAGIQCLAAPSGWHLLGRTPVRTYQ 199 Query: 181 LHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEFVAELV 222 LHR+PTFL EPGD +TF A+D KTF EQDRAAEAGE +AE V Sbjct: 200 LHRNPTFLTEPGDRVTFFAIDHKTFEEQDRAAEAGEIIAEQV 241 >ref|YP_577298.1| hypothetical protein Nham_2040 [Nitrobacter hamburgensis X14] gb|ABE62838.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 243 Score = 345 bits (886), Expect = 2e-93, Method: Compositional matrix adjust. Identities = 170/222 (76%), Positives = 182/222 (81%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 VEF R ID+ ANRRVLALDR +A PI GITETVPTYRSLLVHYDPV+I FD LG +L Sbjct: 20 VEFGRVIDEQANRRVLALDRALADAPIDGITETVPTYRSLLVHYDPVRIGFDELGERLTT 79 Query: 61 RAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGFT 120 A P T TRRWRIPV YGGEHGIDLE +A+ L TTPD IVARHVAGDYRVAMIGFT Sbjct: 80 LARLRAPPTTRTRRWRIPVAYGGEHGIDLETIARTLNTTPDDIVARHVAGDYRVAMIGFT 139 Query: 121 PGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTYQ 180 PGWSYLSGL+ L MPRR PRLLTPAG ISIGG+Q G+QCLAGPSGWHLLGRT +RTY+ Sbjct: 140 PGWSYLSGLDDSLQMPRRASPRLLTPAGAISIGGLQAGIQCLAGPSGWHLLGRTAMRTYR 199 Query: 181 LHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEFVAELV 222 LHRDP FLLEPGDA+TF AVD K F EQDRAA GEFVAELV Sbjct: 200 LHRDPVFLLEPGDAVTFYAVDGKQFTEQDRAAARGEFVAELV 241 >ref|ZP_01047330.1| hypothetical protein NB311A_19255 [Nitrobacter sp. Nb-311A] gb|EAQ34758.1| hypothetical protein NB311A_19255 [Nitrobacter sp. Nb-311A] Length = 244 Score = 333 bits (855), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 159/224 (70%), Positives = 180/224 (80%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 VEF R ID+ ANRRVLALDR +A PI G+TETVPTYRSLLVHYDPV+I + L +L Sbjct: 21 VEFGRVIDELANRRVLALDRALADTPIDGVTETVPTYRSLLVHYDPVRIDVEELAERLSM 80 Query: 61 RAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGFT 120 A P + RRWRIPV YGGE+GIDLED+A L TPD +VARHVAGDYRVAM+GFT Sbjct: 81 LARLPVPPTSSARRWRIPVAYGGENGIDLEDIANTLNMTPDDVVARHVAGDYRVAMLGFT 140 Query: 121 PGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTYQ 180 PGWSYLSGL+R LH+PR + PRLLTP+G +SIGG+Q G+QCLAGPSGW LLGRT VRTYQ Sbjct: 141 PGWSYLSGLDRSLHIPRLRSPRLLTPSGAVSIGGLQAGIQCLAGPSGWRLLGRTAVRTYQ 200 Query: 181 LHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEFVAELVTP 224 LHR+P FLLEPGDAITF A+D K F EQDRAAE GE VA+LV P Sbjct: 201 LHRNPVFLLEPGDAITFYAIDGKQFVEQDRAAERGEIVAQLVAP 244 >ref|NP_948025.1| hypothetical protein RPA2683 [Rhodopseudomonas palustris CGA009] ref|YP_001991941.1| Allophanate hydrolase subunit 1 [Rhodopseudomonas palustris TIE-1] emb|CAE28124.1| DUF213 [Rhodopseudomonas palustris CGA009] gb|ACF01466.1| Allophanate hydrolase subunit 1 [Rhodopseudomonas palustris TIE-1] Length = 242 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 166/224 (74%), Positives = 181/224 (80%), Gaps = 1/224 (0%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQLLA 60 VEF R I D +NRRVLALDR + PIAGI ETVPTYRSLLVHYDP I F AL QL A Sbjct: 18 VEFGRDISDESNRRVLALDRKLKQAPIAGILETVPTYRSLLVHYDPETIGFGALSDQLTA 77 Query: 61 RAAKAPPSET-GTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIGF 119 A + SET RRWRIPV YGGEHGIDLED A+AL TPD +VARH AGDYRVAMIGF Sbjct: 78 LAHTSDESETVAKRRWRIPVCYGGEHGIDLEDAAQALNITPDALVARHAAGDYRVAMIGF 137 Query: 120 TPGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRTY 179 TPGWSYLSGL+ L MPRR+ PRL TPAGTIS+GGIQTG+QCLAGPSGWHLLGRTPVRTY Sbjct: 138 TPGWSYLSGLDPALAMPRRQAPRLHTPAGTISVGGIQTGIQCLAGPSGWHLLGRTPVRTY 197 Query: 180 QLHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEFVAELVT 223 QLHR+P FLLEPGDAI+F +DAK FAE+D AA GE VAEL++ Sbjct: 198 QLHREPIFLLEPGDAISFAQIDAKEFAERDDAASHGEVVAELLS 241 >ref|YP_318114.1| hypothetical protein Nwi_1501 [Nitrobacter winogradskyi Nb-255] gb|ABA04762.1| Conserved hypothetical protein [Nitrobacter winogradskyi Nb-255] Length = 244 Score = 333 bits (853), Expect = 1e-89, Method: Compositional matrix adjust. Identities = 167/226 (73%), Positives = 182/226 (80%), Gaps = 4/226 (1%) Query: 1 VEFSRTIDDAANRRVLALDRVIAAEPIAGITETVPTYRSLLVHYDPVQISFDALGAQL-- 58 VEF R ID+ AN RVLALDR +A EPI G+TETVPTYRSLLVHYDPV+I F+ L +L Sbjct: 21 VEFCRIIDELANHRVLALDRALAEEPIEGVTETVPTYRSLLVHYDPVRIGFEELAERLSA 80 Query: 59 LARAAKAPPSETGTRRWRIPVTYGGEHGIDLEDVAKALQTTPDQIVARHVAGDYRVAMIG 118 LAR AP T RRWRIPV YGGEHGIDLEDVAK L TPD IVARH GDYRVAMIG Sbjct: 81 LARLPVAP--ATRARRWRIPVAYGGEHGIDLEDVAKTLNMTPDDIVARHAGGDYRVAMIG 138 Query: 119 FTPGWSYLSGLERFLHMPRRKDPRLLTPAGTISIGGIQTGVQCLAGPSGWHLLGRTPVRT 178 FTPGWSYLSGL+ L +PR + PRLLTP+G ISIGG+Q G+QCL GPSGW LLGRT VRT Sbjct: 139 FTPGWSYLSGLDSSLRIPRLQSPRLLTPSGMISIGGLQAGIQCLGGPSGWRLLGRTAVRT 198 Query: 179 YQLHRDPTFLLEPGDAITFTAVDAKTFAEQDRAAEAGEFVAELVTP 224 YQLHRDP FLLEPGDAITF AVD K FAEQ+RAA GE+VA+LVTP Sbjct: 199 YQLHRDPVFLLEPGDAITFYAVDGKQFAEQERAAAHGEWVAQLVTP 244