BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0163.0013.p         (114 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001208559.1| hypothetical protein BRADO6743 [Bradyrhizobi...   191   5e-47
ref|NP_767779.1| hypothetical protein blr1139 [Bradyrhizobium ja...   189   2e-46
ref|YP_001236960.1| hypothetical protein BBta_0792 [Bradyrhizobi...   187   5e-46
ref|ZP_08628217.1| hypothetical protein CSIRO_1289 [Bradyrhizobi...   179   1e-43
ref|YP_530646.1| hypothetical protein RPC_0756 [Rhodopseudomonas...   179   1e-43

>ref|YP_001208559.1| hypothetical protein BRADO6743 [Bradyrhizobium sp. ORS 278]
 emb|CAL80344.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 114

 Score =  191 bits (484), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 100/114 (87%)

Query: 1   VPMIYKITPASAWREAERQGVYRGSADDQRDGFIHFSTASQVAETARKHYHGQTGLFLVA 60
           +P IYKI  ASAWREAERQGVYRGSADD RDGFIHFSTASQV ETARKH+ GQ+ LFLV 
Sbjct: 1   MPKIYKICSASAWREAERQGVYRGSADDLRDGFIHFSTASQVPETARKHFFGQSALFLVE 60

Query: 61  VDADALGDALRWERSRNDELFPHLYGELDLGAVTEILDLRARSDGGHDVPELKP 114
           VDADALG+ LRWERSRNDELFPHLYGELDLGAVT +  + +R+DGGHD+P+L P
Sbjct: 61  VDADALGNGLRWERSRNDELFPHLYGELDLGAVTAVHQMHSRADGGHDIPDLVP 114


>ref|NP_767779.1| hypothetical protein blr1139 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46404.1| blr1139 [Bradyrhizobium japonicum USDA 110]
          Length = 115

 Score =  189 bits (479), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 90/114 (78%), Positives = 95/114 (83%)

Query: 1   VPMIYKITPASAWREAERQGVYRGSADDQRDGFIHFSTASQVAETARKHYHGQTGLFLVA 60
           V  IYKI PASAWREAERQGVYRGSADD RDGFIHFSTA+QV ET RKHY GQ  LFLV 
Sbjct: 2   VNKIYKICPASAWREAERQGVYRGSADDARDGFIHFSTAAQVPETLRKHYFGQRALFLVE 61

Query: 61  VDADALGDALRWERSRNDELFPHLYGELDLGAVTEILDLRARSDGGHDVPELKP 114
           VD DALG  LRWERSRNDELFPHLYGELD GAV  +++L  RSDGGHD+PEL P
Sbjct: 62  VDGDALGSELRWERSRNDELFPHLYGELDFGAVISVVNLNMRSDGGHDMPELAP 115


>ref|YP_001236960.1| hypothetical protein BBta_0792 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33054.1| hypothetical protein BBta_0792 [Bradyrhizobium sp. BTAi1]
          Length = 114

 Score =  187 bits (474), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 88/114 (77%), Positives = 98/114 (85%)

Query: 1   VPMIYKITPASAWREAERQGVYRGSADDQRDGFIHFSTASQVAETARKHYHGQTGLFLVA 60
           +P IYKI  ASAWREAER GVYRGSADD RDGFIHFSTA+QV ETARKH+ GQ  LFLV 
Sbjct: 1   MPKIYKICSASAWREAERSGVYRGSADDLRDGFIHFSTAAQVPETARKHFFGQNALFLVE 60

Query: 61  VDADALGDALRWERSRNDELFPHLYGELDLGAVTEILDLRARSDGGHDVPELKP 114
           V+ADALG ALRWERSRNDELFPHLYGELD+GAVT +  + +R+DGGHD+PEL P
Sbjct: 61  VEADALGAALRWERSRNDELFPHLYGELDVGAVTAVHQMHSRADGGHDIPELTP 114


>ref|ZP_08628217.1| hypothetical protein CSIRO_1289 [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP09126.1| hypothetical protein CSIRO_1289 [Bradyrhizobiaceae bacterium SG-6C]
          Length = 114

 Score =  179 bits (455), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/112 (76%), Positives = 95/112 (84%)

Query: 1   VPMIYKITPASAWREAERQGVYRGSADDQRDGFIHFSTASQVAETARKHYHGQTGLFLVA 60
           +P+IYKI  ASAWREAERQG +RGSADD+RDGFIHFSTASQ+  T  KH+ GQ+GLFL+A
Sbjct: 1   MPVIYKICSASAWREAERQGAFRGSADDKRDGFIHFSTASQLPGTVAKHFAGQSGLFLIA 60

Query: 61  VDADALGDALRWERSRNDELFPHLYGELDLGAVTEILDLRARSDGGHDVPEL 112
           VDADALGDALRWE SR  ELFPHLYGELD G VT I DLR RSDG HD+PEL
Sbjct: 61  VDADALGDALRWEPSRGGELFPHLYGELDTGEVTAIHDLRMRSDGSHDIPEL 112


>ref|YP_530646.1| hypothetical protein RPC_0756 [Rhodopseudomonas palustris BisB18]
 gb|ABD86327.1| protein of unknown function DUF952 [Rhodopseudomonas palustris
           BisB18]
          Length = 114

 Score =  179 bits (453), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 86/111 (77%), Positives = 96/111 (86%)

Query: 4   IYKITPASAWREAERQGVYRGSADDQRDGFIHFSTASQVAETARKHYHGQTGLFLVAVDA 63
           IYKI  ASAWREAERQGV+ GSADD RDGFIHFSTA+QV  TA+KH+ G++GLFLVA+DA
Sbjct: 4   IYKICDASAWREAERQGVFAGSADDIRDGFIHFSTAAQVPGTAKKHFAGRSGLFLVAIDA 63

Query: 64  DALGDALRWERSRNDELFPHLYGELDLGAVTEILDLRARSDGGHDVPELKP 114
           DALGDALRWE SRNDELFPHLYGELDLGAV E+ +L  RSDG H +PEL P
Sbjct: 64  DALGDALRWEASRNDELFPHLYGELDLGAVIEVKELPLRSDGSHAIPELAP 114