BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0012.p (365 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_317083.1| dihydroorotate dehydrogenase 2 [Nitrobacter win... 650 0.0 ref|ZP_01044683.1| dihydroorotate dehydrogenase [Nitrobacter sp.... 649 0.0 ref|YP_575905.1| dihydroorotate dehydrogenase 2 [Nitrobacter ham... 648 0.0 ref|YP_001236961.1| dihydroorotate dehydrogenase 2 [Bradyrhizobi... 639 0.0 ref|YP_001208558.1| dihydroorotate dehydrogenase 2 [Bradyrhizobi... 636 e-180 >ref|YP_317083.1| dihydroorotate dehydrogenase 2 [Nitrobacter winogradskyi Nb-255] gb|ABA03731.1| dihydroorotate oxidase A [Nitrobacter winogradskyi Nb-255] Length = 364 Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/364 (87%), Positives = 345/364 (94%) Query: 1 VIRAFDAFSLPLLRWFDPEDAHRMAIQGLKLLPPIRQRPDDPKLAVRAFGLNFPNPIGMA 60 +IRAFD SLPLLRW DPEDAHRMAIQGL+LLPPIRQR DDPKLA RAFGLNFPNPIG+A Sbjct: 1 MIRAFDNLSLPLLRWLDPEDAHRMAIQGLRLLPPIRQRADDPKLAARAFGLNFPNPIGLA 60 Query: 61 AGFDKSAEVPDALLRLGFGFVEIGSVTPKPQGGNPRPRLFRLERDEAVINRMGFNNDGAE 120 AGFDKSAEVPDALL+LGFGFVEIGSVTP+ Q GNPRPR+FRLERDEA+INRMGFNNDGA Sbjct: 61 AGFDKSAEVPDALLKLGFGFVEIGSVTPRAQPGNPRPRVFRLERDEAIINRMGFNNDGAH 120 Query: 121 AVLRRLAARASAGGIVGVNVGANKDSPDRAADYVKLIETFAPVASYFTVNVSSPNTPGLR 180 VLRRLAARA +GGIVGVN+GANKDS +R ADYV+LIE FAPVASYFTVNVSSPNTPGLR Sbjct: 121 TVLRRLAARAHSGGIVGVNIGANKDSANRIADYVRLIEIFAPVASYFTVNVSSPNTPGLR 180 Query: 181 NLQQSAALDDLLARVIDTRERVRKNAGDSPVLLKIAPDLSLAELDDVVHIARSRRVDGMI 240 NLQQ+AALD+LLA+VID RERVR+NAGD+PVLLKIAPDL+L ELDDVVH ARSRR+DGMI Sbjct: 181 NLQQAAALDELLAKVIDARERVRQNAGDTPVLLKIAPDLTLGELDDVVHTARSRRIDGMI 240 Query: 241 VANTTLARPSTLREENRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGIDSGG 300 V NTTLARPSTLR+++RAKEQGGLSGRPLF+LSTRMVAETYVR EGAFPLIGVGGIDSGG Sbjct: 241 VGNTTLARPSTLRDQSRAKEQGGLSGRPLFQLSTRMVAETYVRAEGAFPLIGVGGIDSGG 300 Query: 301 AALTKIRAGASLIQLYSSLVYKGLGLVDDIKRDLSSTLLRTGRDSLSEIVGADAATITAE 360 AALTKIRAGA+LIQLYSSLVYKGLGLVD IKRDL+STLLRTGRDSLSEI+GADAATITAE Sbjct: 301 AALTKIRAGATLIQLYSSLVYKGLGLVDAIKRDLTSTLLRTGRDSLSEIIGADAATITAE 360 Query: 361 DWPV 364 DWPV Sbjct: 361 DWPV 364 >ref|ZP_01044683.1| dihydroorotate dehydrogenase [Nitrobacter sp. Nb-311A] gb|EAQ37464.1| dihydroorotate dehydrogenase [Nitrobacter sp. Nb-311A] Length = 364 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 318/364 (87%), Positives = 345/364 (94%) Query: 1 VIRAFDAFSLPLLRWFDPEDAHRMAIQGLKLLPPIRQRPDDPKLAVRAFGLNFPNPIGMA 60 +IRAFD FSLPLLRWFDPEDAHRMAIQGL+LLPPIRQR +DPKLAVRAFGLNFPNPIG+A Sbjct: 1 MIRAFDNFSLPLLRWFDPEDAHRMAIQGLRLLPPIRQRTEDPKLAVRAFGLNFPNPIGLA 60 Query: 61 AGFDKSAEVPDALLRLGFGFVEIGSVTPKPQGGNPRPRLFRLERDEAVINRMGFNNDGAE 120 AGFDKSAEVPDALL+LGFGFVEIGSVTP+ Q GNPRPR+FRLERDE VINRMGFNNDGA Sbjct: 61 AGFDKSAEVPDALLKLGFGFVEIGSVTPRAQPGNPRPRVFRLERDEGVINRMGFNNDGAH 120 Query: 121 AVLRRLAARASAGGIVGVNVGANKDSPDRAADYVKLIETFAPVASYFTVNVSSPNTPGLR 180 VLRRLAARA +GGIVGVN+GANKDS + ADYV+LIE FAPVASYFTVNVSSPNTPGLR Sbjct: 121 TVLRRLAARAHSGGIVGVNIGANKDSANHIADYVRLIEIFAPVASYFTVNVSSPNTPGLR 180 Query: 181 NLQQSAALDDLLARVIDTRERVRKNAGDSPVLLKIAPDLSLAELDDVVHIARSRRVDGMI 240 NLQQ+AALD+LLARVID RERVR+NAGD+PVLLKIAPDL+LAELDDVVHIARSRR DGMI Sbjct: 181 NLQQAAALDELLARVIDARERVRQNAGDTPVLLKIAPDLTLAELDDVVHIARSRRTDGMI 240 Query: 241 VANTTLARPSTLREENRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGIDSGG 300 V NTTL RPSTLR++ RAKEQGGLSGRPLFRLSTRMVAETYVR EGAFPL+GVGGIDSGG Sbjct: 241 VGNTTLTRPSTLRDQARAKEQGGLSGRPLFRLSTRMVAETYVRTEGAFPLVGVGGIDSGG 300 Query: 301 AALTKIRAGASLIQLYSSLVYKGLGLVDDIKRDLSSTLLRTGRDSLSEIVGADAATITAE 360 AALTKIRAGA+LIQLYSSLVYKGLGL+D+IK DL+STLLRTGRDSL++++GADAATITAE Sbjct: 301 AALTKIRAGATLIQLYSSLVYKGLGLIDNIKSDLTSTLLRTGRDSLADVIGADAATITAE 360 Query: 361 DWPV 364 DWPV Sbjct: 361 DWPV 364 >ref|YP_575905.1| dihydroorotate dehydrogenase 2 [Nitrobacter hamburgensis X14] gb|ABE61445.1| dihydroorotate oxidase A [Nitrobacter hamburgensis X14] Length = 364 Score = 648 bits (1672), Expect = 0.0, Method: Compositional matrix adjust. Identities = 320/363 (88%), Positives = 344/363 (94%) Query: 1 VIRAFDAFSLPLLRWFDPEDAHRMAIQGLKLLPPIRQRPDDPKLAVRAFGLNFPNPIGMA 60 +IRAFD FSLPLLRW DPEDAHRMA+QGL+LLPPIRQR DDPKLAVRAFGLNFPNPIGMA Sbjct: 1 MIRAFDNFSLPLLRWLDPEDAHRMALQGLRLLPPIRQRADDPKLAVRAFGLNFPNPIGMA 60 Query: 61 AGFDKSAEVPDALLRLGFGFVEIGSVTPKPQGGNPRPRLFRLERDEAVINRMGFNNDGAE 120 AGFDKSAEVPDALL+LGFGFVEIGSVTP+PQ GNPRPR+FRLERDE VINRMGFNNDGA Sbjct: 61 AGFDKSAEVPDALLKLGFGFVEIGSVTPRPQPGNPRPRVFRLERDEGVINRMGFNNDGAH 120 Query: 121 AVLRRLAARASAGGIVGVNVGANKDSPDRAADYVKLIETFAPVASYFTVNVSSPNTPGLR 180 VLRRLAARA +GGIVGVNVGANKDS +R ADYV+LIE FAPVASYFTVNVSSPNTP LR Sbjct: 121 VVLRRLAARAHSGGIVGVNVGANKDSGNRVADYVRLIEIFAPVASYFTVNVSSPNTPALR 180 Query: 181 NLQQSAALDDLLARVIDTRERVRKNAGDSPVLLKIAPDLSLAELDDVVHIARSRRVDGMI 240 NLQQ+ AL++LLARVID RERVR+NAGD+PVLLKIAPDL+LAELDDVVHIARSRR+DGMI Sbjct: 181 NLQQADALNELLARVIDARERVRQNAGDTPVLLKIAPDLTLAELDDVVHIARSRRIDGMI 240 Query: 241 VANTTLARPSTLREENRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGIDSGG 300 V NTTLARPS+LR+++RAKEQGGLSGRPLFRLSTRMVAETYVR EGAFPL+G GGIDSGG Sbjct: 241 VGNTTLARPSSLRDQSRAKEQGGLSGRPLFRLSTRMVAETYVRTEGAFPLVGAGGIDSGG 300 Query: 301 AALTKIRAGASLIQLYSSLVYKGLGLVDDIKRDLSSTLLRTGRDSLSEIVGADAATITAE 360 AALTKIRAGA+LIQLYSSLVYKGLGLVDDIKRDL STLLRTG DSLS+IVGADAAT+TAE Sbjct: 301 AALTKIRAGATLIQLYSSLVYKGLGLVDDIKRDLMSTLLRTGHDSLSDIVGADAATMTAE 360 Query: 361 DWP 363 DWP Sbjct: 361 DWP 363 >ref|YP_001236961.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. BTAi1] sp|A5EA61.1|PYRD_BRASB RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase gb|ABQ33055.1| dihydroorotate oxidase A [Bradyrhizobium sp. BTAi1] Length = 364 Score = 639 bits (1648), Expect = 0.0, Method: Compositional matrix adjust. Identities = 316/364 (86%), Positives = 344/364 (94%) Query: 1 VIRAFDAFSLPLLRWFDPEDAHRMAIQGLKLLPPIRQRPDDPKLAVRAFGLNFPNPIGMA 60 +IRAFD SLPLLRW D EDAHR+AIQGLKLLP I+ RPDD KLAVRAFGLNFPNP+GMA Sbjct: 1 MIRAFDQLSLPLLRWLDAEDAHRLAIQGLKLLPAIKPRPDDAKLAVRAFGLNFPNPVGMA 60 Query: 61 AGFDKSAEVPDALLRLGFGFVEIGSVTPKPQGGNPRPRLFRLERDEAVINRMGFNNDGAE 120 AGFDK+AEVPDALLRLGFGFVEIGSVTP+PQ GNPRPRLFRLERDEAV+NRMGFNNDGAE Sbjct: 61 AGFDKNAEVPDALLRLGFGFVEIGSVTPRPQSGNPRPRLFRLERDEAVVNRMGFNNDGAE 120 Query: 121 AVLRRLAARASAGGIVGVNVGANKDSPDRAADYVKLIETFAPVASYFTVNVSSPNTPGLR 180 VLRRLA RA+ GGIVGVNVGANKDS DR ADYV+LIETFAPVASYFTVN+SSPNTPGLR Sbjct: 121 IVLRRLAGRANQGGIVGVNVGANKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLR 180 Query: 181 NLQQSAALDDLLARVIDTRERVRKNAGDSPVLLKIAPDLSLAELDDVVHIARSRRVDGMI 240 NLQQ+A L++LL++V++ R+RVR+ AGD+PVLLKIAPDLSLAELDDVVH+ARSR VDGMI Sbjct: 181 NLQQAAQLNELLSKVLEARDRVRRKAGDTPVLLKIAPDLSLAELDDVVHVARSRGVDGMI 240 Query: 241 VANTTLARPSTLREENRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGIDSGG 300 V+NTTLARP++LRE+ RAKEQGGLSGRPLFRLSTRMVAET+VRVEGAFPLIGVGGIDSGG Sbjct: 241 VSNTTLARPNSLREQLRAKEQGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDSGG 300 Query: 301 AALTKIRAGASLIQLYSSLVYKGLGLVDDIKRDLSSTLLRTGRDSLSEIVGADAATITAE 360 AALTKIRAGASLIQLYSSLVYKGLGLV+ IK DL+STLLRTGRDSLSEIVGADAATITAE Sbjct: 301 AALTKIRAGASLIQLYSSLVYKGLGLVESIKADLTSTLLRTGRDSLSEIVGADAATITAE 360 Query: 361 DWPV 364 DWPV Sbjct: 361 DWPV 364 >ref|YP_001208558.1| dihydroorotate dehydrogenase 2 [Bradyrhizobium sp. ORS 278] sp|A4Z2G7.1|PYRD_BRASO RecName: Full=Dihydroorotate dehydrogenase (quinone); AltName: Full=DHOdehase; Short=DHOD; Short=DHODase; AltName: Full=Dihydroorotate oxidase emb|CAL80343.1| dihydro-orotate oxidase, FMN-linked (UMP biosynthesis) [Bradyrhizobium sp. ORS 278] Length = 364 Score = 636 bits (1640), Expect = e-180, Method: Compositional matrix adjust. Identities = 314/364 (86%), Positives = 342/364 (93%) Query: 1 VIRAFDAFSLPLLRWFDPEDAHRMAIQGLKLLPPIRQRPDDPKLAVRAFGLNFPNPIGMA 60 +IRAFD SLPLLRW D EDAHR+AIQGLKLLP ++ R DD KLAVRAFGLNFPNP+GMA Sbjct: 1 MIRAFDQLSLPLLRWLDAEDAHRLAIQGLKLLPAVKPRADDAKLAVRAFGLNFPNPVGMA 60 Query: 61 AGFDKSAEVPDALLRLGFGFVEIGSVTPKPQGGNPRPRLFRLERDEAVINRMGFNNDGAE 120 AGFDK+AEVPDALLRLGFGFVEIGSVTP+PQ GNPRPRLFRLERDEAVINRMGFNNDGAE Sbjct: 61 AGFDKNAEVPDALLRLGFGFVEIGSVTPRPQSGNPRPRLFRLERDEAVINRMGFNNDGAE 120 Query: 121 AVLRRLAARASAGGIVGVNVGANKDSPDRAADYVKLIETFAPVASYFTVNVSSPNTPGLR 180 VLRRLA RA+ GGIVGVNVGANKDS DR ADYV+LIETFAPVASYFTVN+SSPNTPGLR Sbjct: 121 IVLRRLAGRANQGGIVGVNVGANKDSADRVADYVRLIETFAPVASYFTVNISSPNTPGLR 180 Query: 181 NLQQSAALDDLLARVIDTRERVRKNAGDSPVLLKIAPDLSLAELDDVVHIARSRRVDGMI 240 NLQQ++ LDDLL +V++ R+RVR+ AGD+PVLLKIAPDLSLAELDDVVH+ARSR VDGMI Sbjct: 181 NLQQASQLDDLLTKVLEARDRVRRKAGDTPVLLKIAPDLSLAELDDVVHVARSRGVDGMI 240 Query: 241 VANTTLARPSTLREENRAKEQGGLSGRPLFRLSTRMVAETYVRVEGAFPLIGVGGIDSGG 300 V+NTTLARP++LRE+ RAKEQGGLSGRPLFRLSTRMVAET+VRVEGAFPLIGVGGID+GG Sbjct: 241 VSNTTLARPNSLREQMRAKEQGGLSGRPLFRLSTRMVAETFVRVEGAFPLIGVGGIDTGG 300 Query: 301 AALTKIRAGASLIQLYSSLVYKGLGLVDDIKRDLSSTLLRTGRDSLSEIVGADAATITAE 360 AALTKIRAGASLIQLYSSLVYKGLGLV+ IK DL+STLLRTGR+SLSEIVGADAATITAE Sbjct: 301 AALTKIRAGASLIQLYSSLVYKGLGLVESIKADLTSTLLRTGRESLSEIVGADAATITAE 360 Query: 361 DWPV 364 DWPV Sbjct: 361 DWPV 364