BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0011.p (441 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767781.1| DNA-damage-inducible protein F [Bradyrhizobium ... 700 0.0 ref|YP_001208557.1| cation efflux pump, DNA-damage-inducible pro... 561 e-158 ref|YP_001236962.1| cation efflux pump, DNA-damage-inducible pro... 554 e-155 ref|YP_488213.1| MATE efflux family protein [Rhodopseudomonas pa... 548 e-153 ref|YP_001989901.1| MATE efflux family protein [Rhodopseudomonas... 539 e-151 >ref|NP_767781.1| DNA-damage-inducible protein F [Bradyrhizobium japonicum USDA 110] dbj|BAC46406.1| DNA-damage-inducible protein F [Bradyrhizobium japonicum USDA 110] Length = 441 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 369/441 (83%), Positives = 397/441 (90%) Query: 1 MHAPIHPKITTRQVFAIAGPAMVANLTTPLIGIVSTTAIGRLDDAALLGGVAMASVIFDC 60 MHAP+ KI +RQVFAIAGPAMVANLTTPLIG+VSTTAIGRLDDAALLGGVAMASVIFDC Sbjct: 1 MHAPVPLKIGSRQVFAIAGPAMVANLTTPLIGVVSTTAIGRLDDAALLGGVAMASVIFDC 60 Query: 61 LFWLFAFLRMSTLAFTAQAQGAGEIKEYAAILVRGFIVAGLIGAALIALQVPLAAVTFQL 120 LFWLF FLRMSTLAFTAQA GAGE +E AIL+RGFIVAGLIGAALIALQ+PLAAV F L Sbjct: 61 LFWLFGFLRMSTLAFTAQALGAGETRELTAILMRGFIVAGLIGAALIALQLPLAAVLFDL 120 Query: 121 MGGSEGVTRAAKSYFMIRIWSAPLALANYVILGWLVGQARANLALALQIVINLINMAATV 180 MGGSEGVTRAAK+YFMIRIWS+PLA ANYVILGWLVGQARAN AL LQIVINL+NMAAT+ Sbjct: 121 MGGSEGVTRAAKTYFMIRIWSSPLAFANYVILGWLVGQARANPALLLQIVINLVNMAATI 180 Query: 181 LLVQVYGAGIAGAAIAAVLAETAGFAVGIVVAWRISQGGFAVPAATLFDRAKLMRMLAVN 240 LLV VY GIAGAAIAA+L+ET GFA+G++V R + GGF VP ATLFDRAKLMRMLAVN Sbjct: 181 LLVLVYDTGIAGAAIAALLSETIGFALGVIVCRRYADGGFGVPRATLFDRAKLMRMLAVN 240 Query: 241 RDIMVRTAALIVVFLFFTAKGAREGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRA 300 DIM+RTAALI VFLFFTAKGAR GDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGR Sbjct: 241 SDIMIRTAALIAVFLFFTAKGARAGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRT 300 Query: 301 FGARDARGFSDSTRLVLLWGIGFALVVSVLFALFGPALINLMTTSDDVRRYARAFLPFVI 360 FGARDARGF+DSTRLVL WG+GFALVV+VLFALFG ALIN+MT S+DVRR AR FLPF++ Sbjct: 301 FGARDARGFADSTRLVLAWGLGFALVVAVLFALFGTALINVMTASEDVRRAARDFLPFIV 360 Query: 361 LAPLPGVFAFGFDGIYVGATWAREMRNLMLASLAIFLATWWALSSFGNTGLWIALLGFYV 420 LAP+PGVFAFGFDGIY+GATWAREMRNLMLASLAIFL TWWAL S GN GLW AL+ FYV Sbjct: 361 LAPVPGVFAFGFDGIYIGATWAREMRNLMLASLAIFLFTWWALQSLGNAGLWCALIAFYV 420 Query: 421 ARGGLQGLRYPALLRKTFKTA 441 ARGGLQG RYPAL TF + Sbjct: 421 ARGGLQGARYPALYGATFPKS 441 >ref|YP_001208557.1| cation efflux pump, DNA-damage-inducible protein [Bradyrhizobium sp. ORS 278] emb|CAL80342.1| cation efflux pump, DNA-damage-inducible protein; putative [Bradyrhizobium sp. ORS 278] Length = 427 Score = 561 bits (1447), Expect = e-158, Method: Compositional matrix adjust. Identities = 296/425 (69%), Positives = 351/425 (82%) Query: 14 VFAIAGPAMVANLTTPLIGIVSTTAIGRLDDAALLGGVAMASVIFDCLFWLFAFLRMSTL 73 +F IAGPAM+ANLTTPLIGIVSTTAIGRL +AA+LGGVAMASVIFDCLFWLFAFLR STL Sbjct: 1 MFHIAGPAMIANLTTPLIGIVSTTAIGRLGEAAMLGGVAMASVIFDCLFWLFAFLRASTL 60 Query: 74 AFTAQAQGAGEIKEYAAILVRGFIVAGLIGAALIALQVPLAAVTFQLMGGSEGVTRAAKS 133 AFTAQ+ GAGE E +L+RG +A LIG ALIALQ+P+AA+ F+LMGGS+ V AA++ Sbjct: 61 AFTAQSLGAGESDEIRMVLIRGLALAALIGVALIALQLPIAAIIFELMGGSDAVLGAART 120 Query: 134 YFMIRIWSAPLALANYVILGWLVGQARANLALALQIVINLINMAATVLLVQVYGAGIAGA 193 YF +RIWSAP ALANYV+LGWLVG ARA LALA+Q+ INLINMAAT+LLVQV GIAGA Sbjct: 121 YFKVRIWSAPFALANYVLLGWLVGLARARLALAVQVAINLINMAATILLVQVLERGIAGA 180 Query: 194 AIAAVLAETAGFAVGIVVAWRISQGGFAVPAATLFDRAKLMRMLAVNRDIMVRTAALIVV 253 AIAA++AET G A+G+++A R+ + LFDRAKLM M+A+NRDIM+RTAA+IV Sbjct: 181 AIAALVAETVGVAIGLLLARRLVTTTHGLSLPLLFDRAKLMHMMAINRDIMIRTAAMIVA 240 Query: 254 FLFFTAKGAREGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRAFGARDARGFSDST 313 FLFFTA+GAR GD TLAAN+VLNNFLLV+AFFLDGLANAA+QLCG AFGAR+ F+ +T Sbjct: 241 FLFFTAQGARAGDTTLAANAVLNNFLLVAAFFLDGLANAAEQLCGYAFGARNRDAFAGAT 300 Query: 314 RLVLLWGIGFALVVSVLFALFGPALINLMTTSDDVRRYARAFLPFVILAPLPGVFAFGFD 373 RLVL WG GFALVV+V+F LFGP LI++MT S VR R +LP+V+ +PL VFAF FD Sbjct: 301 RLVLGWGFGFALVVAVIFVLFGPELIDVMTASPAVRSAGRDYLPYVVASPLVSVFAFAFD 360 Query: 374 GIYVGATWAREMRNLMLASLAIFLATWWALSSFGNTGLWIALLGFYVARGGLQGLRYPAL 433 G+Y+GATWAR+MRNLM+A+L +FL W AL FGNTGLW+ALL FY ARGG Q RYPAL Sbjct: 361 GVYIGATWARDMRNLMIAALIVFLGVWLALRGFGNTGLWVALLSFYAARGGFQAARYPAL 420 Query: 434 LRKTF 438 LR +F Sbjct: 421 LRMSF 425 >ref|YP_001236962.1| cation efflux pump, DNA-damage-inducible protein [Bradyrhizobium sp. BTAi1] gb|ABQ33056.1| cation efflux pump, DNA-damage-inducible protein [Bradyrhizobium sp. BTAi1] Length = 434 Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust. Identities = 304/425 (71%), Positives = 359/425 (84%) Query: 14 VFAIAGPAMVANLTTPLIGIVSTTAIGRLDDAALLGGVAMASVIFDCLFWLFAFLRMSTL 73 +F IAGPAM+ANLTTPLIGIV+TTAIGRL A+LGGVAMASVIFDCLFWLFAFLR STL Sbjct: 1 MFDIAGPAMIANLTTPLIGIVATTAIGRLGAPAMLGGVAMASVIFDCLFWLFAFLRASTL 60 Query: 74 AFTAQAQGAGEIKEYAAILVRGFIVAGLIGAALIALQVPLAAVTFQLMGGSEGVTRAAKS 133 AFTAQ+ GAGE E +L+RG +AGL+G LIA+QVPLAAV F+LMGGSE V AA++ Sbjct: 61 AFTAQSLGAGERDEMLMVLIRGLALAGLVGLGLIAVQVPLAAVLFELMGGSEAVRGAART 120 Query: 134 YFMIRIWSAPLALANYVILGWLVGQARANLALALQIVINLINMAATVLLVQVYGAGIAGA 193 YFMIRIWSAPLALANYV+LGWLVG ARA LALA+Q+ INLINMAAT+LLVQV GIAGA Sbjct: 121 YFMIRIWSAPLALANYVLLGWLVGLARARLALAVQVAINLINMAATILLVQVMETGIAGA 180 Query: 194 AIAAVLAETAGFAVGIVVAWRISQGGFAVPAATLFDRAKLMRMLAVNRDIMVRTAALIVV 253 AIAAV+AET G A+G+++A R+ + A+ LFDRAKLM M+AVNRDIM+RTAA+IV Sbjct: 181 AIAAVIAETFGVAIGLLLAHRLVRPAAALSRRALFDRAKLMHMMAVNRDIMIRTAAMIVA 240 Query: 254 FLFFTAKGAREGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRAFGARDARGFSDST 313 FLFFT++GAR GD TLAAN+VLNNFLLV+AFFLDGLANAA+QLCG A+GAR+ F+ +T Sbjct: 241 FLFFTSQGARAGDTTLAANAVLNNFLLVAAFFLDGLANAAEQLCGYAYGARNRDAFAGAT 300 Query: 314 RLVLLWGIGFALVVSVLFALFGPALINLMTTSDDVRRYARAFLPFVILAPLPGVFAFGFD 373 RLVL WG GFALVV+V+ ALFGPALI++MT S VR AR +LP+V+ +PL VFAF FD Sbjct: 301 RLVLAWGFGFALVVAVVLALFGPALIDVMTASPAVRSAARDYLPYVVASPLLSVFAFAFD 360 Query: 374 GIYVGATWAREMRNLMLASLAIFLATWWALSSFGNTGLWIALLGFYVARGGLQGLRYPAL 433 G+Y+GATWAR+MRNLM+A+LA+FLA W+AL FGNTGLWIA+LGFY ARGG Q RYPAL Sbjct: 361 GVYIGATWARDMRNLMVAALAVFLAIWFALRGFGNTGLWIAMLGFYAARGGFQAARYPAL 420 Query: 434 LRKTF 438 L+ +F Sbjct: 421 LKASF 425 >ref|YP_488213.1| MATE efflux family protein [Rhodopseudomonas palustris HaA2] gb|ABD09302.1| MATE efflux family protein [Rhodopseudomonas palustris HaA2] Length = 452 Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust. Identities = 302/438 (68%), Positives = 350/438 (79%) Query: 4 PIHPKITTRQVFAIAGPAMVANLTTPLIGIVSTTAIGRLDDAALLGGVAMASVIFDCLFW 63 P +T+RQVFAIAGPAMVANLTTPL+G+V+TTAIGRL DA +LGGVAM SVIFDCLFW Sbjct: 2 PPASFVTSRQVFAIAGPAMVANLTTPLLGVVATTAIGRLGDATMLGGVAMTSVIFDCLFW 61 Query: 64 LFAFLRMSTLAFTAQAQGAGEIKEYAAILVRGFIVAGLIGAALIALQVPLAAVTFQLMGG 123 LF FLRMSTLAFTAQA GAG+ +E A LVRG IVA LIG ALIALQ P+AA MGG Sbjct: 62 LFGFLRMSTLAFTAQALGAGDTREVPAHLVRGLIVAALIGLALIALQAPMAAALIGAMGG 121 Query: 124 SEGVTRAAKSYFMIRIWSAPLALANYVILGWLVGQARANLALALQIVINLINMAATVLLV 183 S+GV+ AAK+YF IRIWSAPL LAN+ +LGWLVGQARA LAL +Q+ INLIN+A T+ LV Sbjct: 122 SDGVSAAAKAYFSIRIWSAPLVLANFAVLGWLVGQARAKLALGVQVAINLINIATTIALV 181 Query: 184 QVYGAGIAGAAIAAVLAETAGFAVGIVVAWRISQGGFAVPAATLFDRAKLMRMLAVNRDI 243 + GIAGAAIAAV+AE +G VG+ VA + +G A LFD KL RM AVNRDI Sbjct: 182 LWFEFGIAGAAIAAVIAEGSGLVVGLAVAIWLFRGVPRPSRAALFDSDKLKRMFAVNRDI 241 Query: 244 MVRTAALIVVFLFFTAKGAREGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRAFGA 303 M+RTAA+I VFLFFTA+GAR+GDV LA NSVLNNFL+VSAFFLDGLANAA+QLCGR GA Sbjct: 242 MIRTAAMIAVFLFFTAQGARDGDVVLATNSVLNNFLMVSAFFLDGLANAAEQLCGRTLGA 301 Query: 304 RDARGFSDSTRLVLLWGIGFALVVSVLFALFGPALINLMTTSDDVRRYARAFLPFVILAP 363 RD GF +TRLV+LWG GFALVVS +AL GP LI++MT+++++RR AR +L V LAP Sbjct: 302 RDRAGFVAATRLVILWGFGFALVVSATYALAGPMLIDVMTSNEELRRAARDYLWLVTLAP 361 Query: 364 LPGVFAFGFDGIYVGATWAREMRNLMLASLAIFLATWWALSSFGNTGLWIALLGFYVARG 423 + GVFAF FDGI++GATWAREMRNLML SL +F A+W AL GNTGLWIALL YV RG Sbjct: 362 VLGVFAFAFDGIFIGATWAREMRNLMLLSLVLFFASWLALRPLGNTGLWIALLLHYVWRG 421 Query: 424 GLQGLRYPALLRKTFKTA 441 GLQ LRYPA+LR +F A Sbjct: 422 GLQALRYPAMLRTSFPAA 439 >ref|YP_001989901.1| MATE efflux family protein [Rhodopseudomonas palustris TIE-1] gb|ACE99425.1| MATE efflux family protein [Rhodopseudomonas palustris TIE-1] Length = 440 Score = 539 bits (1388), Expect = e-151, Method: Compositional matrix adjust. Identities = 297/435 (68%), Positives = 353/435 (81%), Gaps = 2/435 (0%) Query: 6 HPKITTRQVFAIAGPAMVANLTTPLIGIVSTTAIGRLDDAALLGGVAMASVIFDCLFWLF 65 H +TTRQVFAIAGPAMVANLTTPL+G+V+TTAIGRL +A LLGGV+MASV+FDCLFWLF Sbjct: 5 HSSVTTRQVFAIAGPAMVANLTTPLLGVVATTAIGRLGEATLLGGVSMASVLFDCLFWLF 64 Query: 66 AFLRMSTLAFTAQAQGAGEIKEYAAILVRGFIVAGLIGAALIALQVPLAAVTFQLMGGSE 125 FLRMSTLAFTAQA GAG+ +E A L+RG IVA IG LIALQ PLAAV MGGSE Sbjct: 65 GFLRMSTLAFTAQALGAGQSREVPAHLLRGLIVAAGIGLLLIALQGPLAAVLIGAMGGSE 124 Query: 126 GVTRAAKSYFMIRIWSAPLALANYVILGWLVGQARANLALALQIVINLINMAATVLLVQV 185 V+ AAK+YF IRIWS+PL LAN+ +LGWLVGQARA LALA+QI INLIN+AATVLLV Sbjct: 125 AVSTAAKTYFSIRIWSSPLVLANFAVLGWLVGQARATLALAVQIAINLINIAATVLLVLW 184 Query: 186 YGAGIAGAAIAAVLAETAGFAVGI-VVAWRISQGGFAVPAATLFDRAKLMRMLAVNRDIM 244 + G+AGAAIAAV+AE +G +G+ + AWR G F V A LFD +L RM A+NRDIM Sbjct: 185 FDFGVAGAAIAAVIAEGSGLVIGLAIAAWR-GHGLFKVSRAMLFDPHRLRRMFAINRDIM 243 Query: 245 VRTAALIVVFLFFTAKGAREGDVTLAANSVLNNFLLVSAFFLDGLANAAQQLCGRAFGAR 304 +RTAALI VFLFFTA+GAR GDV LA N+VLNNFL++SAFFLDGLANAA+QLCGR GAR Sbjct: 244 IRTAALIAVFLFFTAQGARGGDVVLATNAVLNNFLMISAFFLDGLANAAEQLCGRTLGAR 303 Query: 305 DARGFSDSTRLVLLWGIGFALVVSVLFALFGPALINLMTTSDDVRRYARAFLPFVILAPL 364 D GF +TRLV+LWG GFAL+VS ++A GPALI+ +T+++++RR AR +L V LAP+ Sbjct: 304 DRAGFVKATRLVILWGFGFALIVSAIYAFAGPALIDFITSNEELRRTARDYLWLVTLAPM 363 Query: 365 PGVFAFGFDGIYVGATWAREMRNLMLASLAIFLATWWALSSFGNTGLWIALLGFYVARGG 424 GVFAF +DG+++GATWAREMRNLML SL +FL +W+AL GNTGLWIALL YV RGG Sbjct: 364 LGVFAFAYDGVFIGATWAREMRNLMLLSLVLFLLSWFALRPLGNTGLWIALLSHYVWRGG 423 Query: 425 LQGLRYPALLRKTFK 439 LQ LRYPA++R +F Sbjct: 424 LQALRYPAMVRTSFS 438