BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0009.p (244 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767782.1| hypothetical protein bll1142 [Bradyrhizobium ja... 405 e-111 ref|YP_567928.1| beta-lactamase-like protein [Rhodopseudomonas p... 375 e-102 ref|YP_530644.1| beta-lactamase-like protein [Rhodopseudomonas p... 365 4e-99 ref|YP_488215.1| Beta-lactamase-like [Rhodopseudomonas palustris... 365 5e-99 ref|YP_004107319.1| hypothetical protein Rpdx1_0958 [Rhodopseudo... 361 5e-98 >ref|NP_767782.1| hypothetical protein bll1142 [Bradyrhizobium japonicum USDA 110] dbj|BAC46407.1| bll1142 [Bradyrhizobium japonicum USDA 110] Length = 244 Score = 405 bits (1041), Expect = e-111, Method: Compositional matrix adjust. Identities = 193/242 (79%), Positives = 211/242 (87%) Query: 1 MQLRFVGCGDAFGSGGRFNTCFHVCGARSNFLIDCGASSLPTMKRLEIDRDAIDLILITH 60 MQLRFVGCGDAFGSGGR NTCFHV G +NFLIDCGAS+LP +KRLEIDR+ IDLILITH Sbjct: 1 MQLRFVGCGDAFGSGGRLNTCFHVAGREANFLIDCGASALPALKRLEIDRNDIDLILITH 60 Query: 61 FHGDHFAGLPFFLLDAQFSRRTRPLVIAGPQGIETKLPAVMEVMFEHSSKTKQRFDLSVV 120 FHGDHFAGLPF LLDAQFSRRTRPL IAGPQGIET+L VMEV+FEHSSKT+QRF+LSVV Sbjct: 61 FHGDHFAGLPFVLLDAQFSRRTRPLTIAGPQGIETRLREVMEVLFEHSSKTRQRFELSVV 120 Query: 121 TLAPRETRSFGEVTVTPYPVVHGESGGPFLAYRVGAEGRIISYSADTEWTDALIPAAQDA 180 LA + R FG VTVTPYPVVHGESGGPFLAYRV EGR ++YSADTEWT+ LIP A A Sbjct: 121 ELASGQRRDFGAVTVTPYPVVHGESGGPFLAYRVETEGRTLAYSADTEWTETLIPLAHGA 180 Query: 181 DLFIAEAYMYEKTVKNHLSLKTLEAHLPAINAKRVVLTHMSDDVLGRIDDLPYTAASDGM 240 DLFIAEAYMYEK VKNHLSLKTLE HLPAI AKR+VLTHMSDD+L R+ D+ + AA DGM Sbjct: 181 DLFIAEAYMYEKVVKNHLSLKTLEQHLPAIGAKRLVLTHMSDDMLSRLVDIEHLAAEDGM 240 Query: 241 VV 242 V+ Sbjct: 241 VL 242 >ref|YP_567928.1| beta-lactamase-like protein [Rhodopseudomonas palustris BisB5] gb|ABE38027.1| beta-lactamase-like [Rhodopseudomonas palustris BisB5] Length = 244 Score = 375 bits (962), Expect = e-102, Method: Compositional matrix adjust. Identities = 173/244 (70%), Positives = 202/244 (82%) Query: 1 MQLRFVGCGDAFGSGGRFNTCFHVCGARSNFLIDCGASSLPTMKRLEIDRDAIDLILITH 60 MQLRFVGCGDAFGSGGR NTCFHV G +NFLIDCGA++LP +KR I RDA+DLILITH Sbjct: 1 MQLRFVGCGDAFGSGGRLNTCFHVSGESANFLIDCGATTLPALKRYGISRDALDLILITH 60 Query: 61 FHGDHFAGLPFFLLDAQFSRRTRPLVIAGPQGIETKLPAVMEVMFEHSSKTKQRFDLSVV 120 FHGDHF GLPF LLDAQF++R RPLVIAGP GI+ +L +ME +FEHSS TK FDL VV Sbjct: 61 FHGDHFGGLPFLLLDAQFAKRKRPLVIAGPLGIDIRLTRLMEALFEHSSATKPTFDLQVV 120 Query: 121 TLAPRETRSFGEVTVTPYPVVHGESGGPFLAYRVGAEGRIISYSADTEWTDALIPAAQDA 180 L P ++FG VTVTP+PVVHG+SGGPF AYR+ AEGR ++YS DT+WTD L+ AA DA Sbjct: 121 ALEPAVPQTFGAVTVTPFPVVHGDSGGPFFAYRIEAEGRTLAYSGDTQWTDTLVSAAHDA 180 Query: 181 DLFIAEAYMYEKTVKNHLSLKTLEAHLPAINAKRVVLTHMSDDVLGRIDDLPYTAASDGM 240 D+FIAEAY YE+TVKNHLSLKTLE HLP IN KR++LTHM DDVL R+D +P+ ASDG+ Sbjct: 181 DVFIAEAYTYERTVKNHLSLKTLETHLPEINPKRLILTHMGDDVLHRLDTVPHMGASDGL 240 Query: 241 VVEL 244 +VEL Sbjct: 241 IVEL 244 >ref|YP_530644.1| beta-lactamase-like protein [Rhodopseudomonas palustris BisB18] gb|ABD86325.1| beta-lactamase-like [Rhodopseudomonas palustris BisB18] Length = 244 Score = 365 bits (936), Expect = 4e-99, Method: Compositional matrix adjust. Identities = 168/244 (68%), Positives = 200/244 (81%) Query: 1 MQLRFVGCGDAFGSGGRFNTCFHVCGARSNFLIDCGASSLPTMKRLEIDRDAIDLILITH 60 MQLRFVGCGDAFGSGGR NTCFHV G + NFLIDCGASSLP +KR I RD IDL+LITH Sbjct: 1 MQLRFVGCGDAFGSGGRLNTCFHVSGEQVNFLIDCGASSLPALKRYGILRDDIDLVLITH 60 Query: 61 FHGDHFAGLPFFLLDAQFSRRTRPLVIAGPQGIETKLPAVMEVMFEHSSKTKQRFDLSVV 120 FH DHF G+PF LL+AQF +R RPLVIAGP GIE +L +ME MFEHSS TKQ F+LSVV Sbjct: 61 FHADHFGGVPFLLLEAQFGKRKRPLVIAGPPGIELRLTRLMEAMFEHSSSTKQHFELSVV 120 Query: 121 TLAPRETRSFGEVTVTPYPVVHGESGGPFLAYRVGAEGRIISYSADTEWTDALIPAAQDA 180 + P ETR FG V V+ +PVVHG+SGGPF AYR+ AEGR ++YS DT+WT+ L+ A DA Sbjct: 121 AIEPNETREFGAVKVSAFPVVHGDSGGPFHAYRIEAEGRTLAYSGDTQWTETLVGAGHDA 180 Query: 181 DLFIAEAYMYEKTVKNHLSLKTLEAHLPAINAKRVVLTHMSDDVLGRIDDLPYTAASDGM 240 DL IAEAY Y++ VKNHLSLKTLE HLP IN +R++LTHMSD++L ++D +P+TAASDG+ Sbjct: 181 DLLIAEAYTYDRPVKNHLSLKTLETHLPEINPRRLILTHMSDEMLRKLDAVPHTAASDGL 240 Query: 241 VVEL 244 +VEL Sbjct: 241 IVEL 244 >ref|YP_488215.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] gb|ABD09304.1| Beta-lactamase-like [Rhodopseudomonas palustris HaA2] Length = 244 Score = 365 bits (936), Expect = 5e-99, Method: Compositional matrix adjust. Identities = 167/244 (68%), Positives = 198/244 (81%) Query: 1 MQLRFVGCGDAFGSGGRFNTCFHVCGARSNFLIDCGASSLPTMKRLEIDRDAIDLILITH 60 MQLRFVGCGDA GSGGR NTCFHV G R NFLIDCGA+SLP +KR I RDA+DL+LITH Sbjct: 1 MQLRFVGCGDALGSGGRLNTCFHVAGERVNFLIDCGATSLPALKRYGISRDALDLVLITH 60 Query: 61 FHGDHFAGLPFFLLDAQFSRRTRPLVIAGPQGIETKLPAVMEVMFEHSSKTKQRFDLSVV 120 FHGDHF GLPF LLDA+ ++R RPLVIAGP GI+ +L VME +FEHSS T+ FDL V+ Sbjct: 61 FHGDHFGGLPFLLLDAKSAKRKRPLVIAGPPGIDIRLTRVMEALFEHSSATQPTFDLQVI 120 Query: 121 TLAPRETRSFGEVTVTPYPVVHGESGGPFLAYRVGAEGRIISYSADTEWTDALIPAAQDA 180 L P R+FG VT TP+PV+HG+SGGPF AYR+ AEGR ++YS DT+WTD L+ AA DA Sbjct: 121 ALDPTVPRTFGAVTATPFPVIHGDSGGPFYAYRIEAEGRTLAYSGDTQWTDTLVAAAHDA 180 Query: 181 DLFIAEAYMYEKTVKNHLSLKTLEAHLPAINAKRVVLTHMSDDVLGRIDDLPYTAASDGM 240 DLFIAEAY Y++ VKNHLSLK LE HLP IN KR++LTHM DDVL ++D +P+ AASDG+ Sbjct: 181 DLFIAEAYTYDRNVKNHLSLKALETHLPEINPKRLILTHMGDDVLHKLDTVPHMAASDGL 240 Query: 241 VVEL 244 +VEL Sbjct: 241 IVEL 244 >ref|YP_004107319.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] gb|ADU42586.1| hypothetical protein Rpdx1_0958 [Rhodopseudomonas palustris DX-1] Length = 244 Score = 361 bits (927), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 168/244 (68%), Positives = 197/244 (80%) Query: 1 MQLRFVGCGDAFGSGGRFNTCFHVCGARSNFLIDCGASSLPTMKRLEIDRDAIDLILITH 60 MQ+RFVGCGDA GSGGR NTCFHV G NFLIDCGA+S+P +KR I R+ +DLILITH Sbjct: 1 MQVRFVGCGDALGSGGRLNTCFHVSGQTVNFLIDCGATSMPALKRYGILREDLDLILITH 60 Query: 61 FHGDHFAGLPFFLLDAQFSRRTRPLVIAGPQGIETKLPAVMEVMFEHSSKTKQRFDLSVV 120 FHGDHF GLPF +LDA+F +R RPLVIAGP GI+ +L +ME MFEHSS TK FDL V+ Sbjct: 61 FHGDHFGGLPFLMLDAKFLKRKRPLVIAGPPGIDIRLTRLMEAMFEHSSATKPSFDLQVL 120 Query: 121 TLAPRETRSFGEVTVTPYPVVHGESGGPFLAYRVGAEGRIISYSADTEWTDALIPAAQDA 180 L P TR FG VTVTP+PVVHG+SGGPF AYRV AEGRI++YS DT+WTD L+ AA DA Sbjct: 121 ALEPGVTRQFGAVTVTPFPVVHGDSGGPFFAYRVEAEGRILAYSGDTQWTDQLVAAAHDA 180 Query: 181 DLFIAEAYMYEKTVKNHLSLKTLEAHLPAINAKRVVLTHMSDDVLGRIDDLPYTAASDGM 240 DLFI EAY Y++TVKNH+SLK LE HLP IN KRV+LTHM D+VL R+D +P+ AASDG+ Sbjct: 181 DLFICEAYTYDRTVKNHISLKALETHLPEINPKRVILTHMGDEVLHRLDTVPHMAASDGL 240 Query: 241 VVEL 244 +V L Sbjct: 241 IVPL 244