BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0163.0008.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767783.1| hypothetical protein bll1143 [Bradyrhizobium ja...   162   1e-38
ref|NP_946154.1| hypothetical protein RPA0801 [Rhodopseudomonas ...   150   9e-35
ref|YP_004107322.1| hypothetical protein Rpdx1_0961 [Rhodopseudo...   149   2e-34
ref|YP_530642.1| hypothetical protein RPC_0752 [Rhodopseudomonas...   149   2e-34
ref|YP_001989902.1| hypothetical protein Rpal_0869 [Rhodopseudom...   148   2e-34

>ref|NP_767783.1| hypothetical protein bll1143 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46408.1| bll1143 [Bradyrhizobium japonicum USDA 110]
          Length = 118

 Score =  162 bits (410), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 82/99 (82%), Positives = 90/99 (90%)

Query: 1   MPDNIRDLPAGRSDGLYRFLGGSPLSVAFRLILLSILVGVVLAAIGLDPWNILTSIRRLF 60
           M  ++RDLPAGRSDGL RFLGGSPL+VAFRL+LLSILVGVVLAAIG DPWNI+ SIR LF
Sbjct: 19  MVQDVRDLPAGRSDGLNRFLGGSPLAVAFRLVLLSILVGVVLAAIGFDPWNIIYSIRLLF 78

Query: 61  QSIWDFGFDAINWAWRYFLLGAVIVIPIWLLSRLFGAPR 99
           Q +WD GFDA+NW WRYFLLGAVIVIPIWLLSR+FGAPR
Sbjct: 79  QRLWDLGFDAVNWLWRYFLLGAVIVIPIWLLSRVFGAPR 117


>ref|NP_946154.1| hypothetical protein RPA0801 [Rhodopseudomonas palustris CGA009]
 emb|CAE26245.1| conserved hypothetical protein [Rhodopseudomonas palustris CGA009]
          Length = 111

 Score =  150 bits (378), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 87/101 (86%), Gaps = 1/101 (0%)

Query: 1   MPDNIRDLPAGRSDGLYRFLGGSPLSVAFRLILLSILVGVVLAAIGLDPWNILTSIRRLF 60
           M D+IRDLPA   D + RFLGGSP++VAFRLIL+SILVGVVLAAIGLDPWNI+TSIR LF
Sbjct: 12  MRDDIRDLPAN-DDRMTRFLGGSPMAVAFRLILMSILVGVVLAAIGLDPWNIITSIRLLF 70

Query: 61  QSIWDFGFDAINWAWRYFLLGAVIVIPIWLLSRLFGAPRGR 101
           + IWD GFDAIN  WRYFLLGAVIVIPIWLL+RL   PRGR
Sbjct: 71  ERIWDLGFDAINGLWRYFLLGAVIVIPIWLLTRLASTPRGR 111


>ref|YP_004107322.1| hypothetical protein Rpdx1_0961 [Rhodopseudomonas palustris DX-1]
 gb|ADU42589.1| hypothetical protein Rpdx1_0961 [Rhodopseudomonas palustris DX-1]
          Length = 100

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 88/101 (87%), Gaps = 1/101 (0%)

Query: 1   MPDNIRDLPAGRSDGLYRFLGGSPLSVAFRLILLSILVGVVLAAIGLDPWNILTSIRRLF 60
           M D+IRDLPA   D + RFLGGSP++VAFRLIL+SILVGVVLAAIGLDPWNI+TSIR LF
Sbjct: 1   MRDDIRDLPAN-DDRMTRFLGGSPMAVAFRLILMSILVGVVLAAIGLDPWNIVTSIRLLF 59

Query: 61  QSIWDFGFDAINWAWRYFLLGAVIVIPIWLLSRLFGAPRGR 101
           + IW+ GFDAI+  WRYFLLGAVIVIPIWLLSRLF  PRGR
Sbjct: 60  ERIWELGFDAISGLWRYFLLGAVIVIPIWLLSRLFSTPRGR 100


>ref|YP_530642.1| hypothetical protein RPC_0752 [Rhodopseudomonas palustris BisB18]
 gb|ABD86323.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18]
          Length = 99

 Score =  149 bits (375), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 78/100 (78%), Positives = 87/100 (87%), Gaps = 1/100 (1%)

Query: 1   MPDNIRDLPAGRSDGLYRFLGGSPLSVAFRLILLSILVGVVLAAIGLDPWNILTSIRRLF 60
           MP++ RDLPA R DGL RFLGGSPL+VAFRL L+S+LVGVVLAAIG DPWNI+TSIR LF
Sbjct: 1   MPNDTRDLPA-RDDGLTRFLGGSPLAVAFRLALMSLLVGVVLAAIGFDPWNIITSIRLLF 59

Query: 61  QSIWDFGFDAINWAWRYFLLGAVIVIPIWLLSRLFGAPRG 100
             +W+ GFDAIN  WRYFLLGAV+VIPIWLLSRLFGAPR 
Sbjct: 60  IRVWELGFDAINGLWRYFLLGAVVVIPIWLLSRLFGAPRA 99


>ref|YP_001989902.1| hypothetical protein Rpal_0869 [Rhodopseudomonas palustris TIE-1]
 gb|ACE99426.1| conserved hypothetical protein [Rhodopseudomonas palustris TIE-1]
          Length = 100

 Score =  148 bits (374), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 79/101 (78%), Positives = 87/101 (86%), Gaps = 1/101 (0%)

Query: 1   MPDNIRDLPAGRSDGLYRFLGGSPLSVAFRLILLSILVGVVLAAIGLDPWNILTSIRRLF 60
           M D+IRDLPA   D + RFLGGSP++VAFRLIL+SILVGVVLAAIGLDPWNI+TSIR LF
Sbjct: 1   MRDDIRDLPAN-DDRMTRFLGGSPMAVAFRLILMSILVGVVLAAIGLDPWNIITSIRLLF 59

Query: 61  QSIWDFGFDAINWAWRYFLLGAVIVIPIWLLSRLFGAPRGR 101
           + IWD GFDAIN  WRYFLLGAVIVIPIWLL+RL   PRGR
Sbjct: 60  ERIWDLGFDAINGLWRYFLLGAVIVIPIWLLTRLASTPRGR 100