BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0004.p (308 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767786.1| hypothetical protein blr1146 [Bradyrhizobium ja... 422 e-116 ref|YP_001208553.1| putative SAM-dependent methyltransferase [Br... 393 e-107 ref|YP_001236968.1| hypothetical protein BBta_0800 [Bradyrhizobi... 389 e-106 ref|ZP_07027237.1| Methyltransferase type 11 [Afipia sp. 1NLS2] ... 365 3e-99 ref|YP_002287683.1| tetratricopeptide TPR_2 [Oligotropha carboxi... 343 1e-92 >ref|NP_767786.1| hypothetical protein blr1146 [Bradyrhizobium japonicum USDA 110] dbj|BAC46411.1| blr1146 [Bradyrhizobium japonicum USDA 110] Length = 308 Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust. Identities = 212/307 (69%), Positives = 250/307 (81%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 M RLFLSSGDL+ADRR+EFARDLQLKGDLPAAA+LLEQAIEL P F SAW+TLG+IR + Sbjct: 1 MPLRLFLSSGDLMADRRFEFARDLQLKGDLPAAADLLEQAIELAPNFASAWFTLGEIRQQ 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPGYVQTLFDQYAPRFEAAL 120 LG+R+ AIAAFR +R++DP D+HGAGLHL++LG ++ MP YVQ LFDQYAPRFE L Sbjct: 61 LGERDKAIAAFRKSRESDPGDQHGAGLHLIRLGDAQMTEMPKAYVQALFDQYAPRFEDVL 120 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 + DLGYR PAL+FKAVL+ R AK+PAFFKR IDLGCGTGLAA AFA+ VD FIGIDLSP Sbjct: 121 INDLGYRAPALIFKAVLAARVAAKKPAFFKRTIDLGCGTGLAAAAFAKQVDHFIGIDLSP 180 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 MI A AT LYAELEV DM++ + ++ +ASA L++AADA VY++DLAPVLAEA RVL A Sbjct: 181 GMIRVARATELYAELEVADMIEGLRSKGDASANLVVAADAFVYLSDLAPVLAEAGRVLAA 240 Query: 241 GGVLAFTTETHDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPAPG 300 GGVLAFT ETHDG +++GEGLRYAHSA YVR ++A AGL L L+ S RNE+N P G Sbjct: 241 GGVLAFTLETHDGSGIVLGEGLRYAHSAEYVRGAIAQAGLKLLTLEPGSPRNENNEPVRG 300 Query: 301 LVAVAVK 307 LV VA K Sbjct: 301 LVIVAEK 307 >ref|YP_001208553.1| putative SAM-dependent methyltransferase [Bradyrhizobium sp. ORS 278] emb|CAL80338.1| conserved hypothetical protein; putative SAM-dependent methyltransferases [Bradyrhizobium sp. ORS 278] Length = 308 Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust. Identities = 197/307 (64%), Positives = 242/307 (78%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 M R+FLSSGDL+ADRRYEFARDLQLKGDL AAAE++EQAIE+ P F SAW+ LG+IR+ Sbjct: 1 MPHRVFLSSGDLIADRRYEFARDLQLKGDLAAAAEVMEQAIEVAPSFASAWFELGQIRIA 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPGYVQTLFDQYAPRFEAAL 120 LG+ + AIAAF++AR ADP+DRHGAG+ LMQLG ++ MP YVQ+LFDQYAPRFEA L Sbjct: 61 LGETDKAIAAFQNARAADPDDRHGAGVRLMQLGAVPLTDMPKAYVQSLFDQYAPRFEAEL 120 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 + L YR P +LFKAVL+VRA ++PA+FKRAIDLGCGTGL A AFA++VD FIGIDLS Sbjct: 121 IERLNYRAPNILFKAVLAVRAVERKPAYFKRAIDLGCGTGLGAAAFAKNVDSFIGIDLSA 180 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 MI +A ATGLYA LEVDDM + + + SA+L+LAADAMVYV DL PVLAE+ RVL+ Sbjct: 181 GMIAEARATGLYAALEVDDMTAGLQRQPDGSADLVLAADAMVYVGDLMPVLAESRRVLMP 240 Query: 241 GGVLAFTTETHDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPAPG 300 GG++AFT ET+DG+ VI+G+GLRYAH A Y+R V +AGL L L+ S R E+ +P G Sbjct: 241 GGLVAFTVETYDGDGVIMGKGLRYAHGAEYIRDVVTSAGLQLKQLEPASPRTEEQLPVRG 300 Query: 301 LVAVAVK 307 L VA + Sbjct: 301 LAVVASR 307 >ref|YP_001236968.1| hypothetical protein BBta_0800 [Bradyrhizobium sp. BTAi1] gb|ABQ33062.1| hypothetical protein BBta_0800 [Bradyrhizobium sp. BTAi1] Length = 308 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 195/307 (63%), Positives = 236/307 (76%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 M R FLSSGDL+ADRRYEFARDLQLKGDL AAAE++EQAIE+ P F SAW+ LG+IR+ Sbjct: 1 MPHRFFLSSGDLIADRRYEFARDLQLKGDLAAAAEVMEQAIEVAPNFASAWFELGQIRIA 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPGYVQTLFDQYAPRFEAAL 120 LG+ + AI AF++A ADP+DRHGAG+ LMQLG +S MP YV++LFDQYAPRFEA L Sbjct: 61 LGETDKAITAFQNACAADPDDRHGAGVRLMQLGAAPLSDMPKAYVRSLFDQYAPRFEAEL 120 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 + L YR PA+LFKAVL+VR K+PA+F+RAIDLGCGTGL A AFA++VD FIGIDLS Sbjct: 121 IERLNYRAPAILFKAVLAVRVAEKKPAYFQRAIDLGCGTGLGAAAFAKNVDSFIGIDLSA 180 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 MI +A TGLYA LEVDDM + + + SA+L+LAADAMVYV DLAPVLAEA+RVL Sbjct: 181 GMIAQARETGLYAALEVDDMTAGLQRQPDLSADLVLAADAMVYVGDLAPVLAEAHRVLRP 240 Query: 241 GGVLAFTTETHDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPAPG 300 G++ FT ETHDGE VI+G+GLRYAH A YVR + + GL L L+ S R E+ +P G Sbjct: 241 SGLVTFTVETHDGEGVIMGKGLRYAHGAEYVRGVIQSTGLQLKHLEPASPRTEEQLPVRG 300 Query: 301 LVAVAVK 307 L VA + Sbjct: 301 LAVVATR 307 >ref|ZP_07027237.1| Methyltransferase type 11 [Afipia sp. 1NLS2] gb|EFI50993.1| Methyltransferase type 11 [Afipia sp. 1NLS2] Length = 308 Score = 365 bits (938), Expect = 3e-99, Method: Compositional matrix adjust. Identities = 182/308 (59%), Positives = 232/308 (75%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 M LFLSSGDL+ADRRY+FARDLQL+GD+ AA+L+ QA+E P F SAW+ LG+++ + Sbjct: 1 MPAPLFLSSGDLIADRRYDFARDLQLRGDIAGAADLMAQAVERAPNFASAWFALGELKQQ 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPGYVQTLFDQYAPRFEAAL 120 L AI A+R A++ADP+DRHGA L L++LGVE VS MPP YV++LFDQYAP FE AL Sbjct: 61 LNLHGEAIQAYRKAQEADPQDRHGAKLRLIRLGVEKVSDMPPAYVRSLFDQYAPTFEDAL 120 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 + +L YRGP+LL KAVLS G K+PAFFK AIDLGCGTGLAA AF ++VD F+GIDLSP Sbjct: 121 LNNLSYRGPSLLLKAVLSACRGIKRPAFFKSAIDLGCGTGLAARAFEKNVDAFVGIDLSP 180 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 MI KA ATGLY LEV DM++ + +A+ +L L+ADA++Y+ DLAP L E RVL Sbjct: 181 GMIAKAEATGLYRRLEVADMVEGLKGEADAAFDLALSADAIIYLPDLAPALKEVARVLRP 240 Query: 241 GGVLAFTTETHDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPAPG 300 G++AFTTETH G+ V+IG GLRYAH +VR ++ AGL L +++ S R E ++P PG Sbjct: 241 NGLVAFTTETHPGDGVVIGAGLRYAHGTVHVRDAIMGAGLVLCSIEEASTRTESDVPVPG 300 Query: 301 LVAVAVKA 308 L+AVA KA Sbjct: 301 LIAVARKA 308 >ref|YP_002287683.1| tetratricopeptide TPR_2 [Oligotropha carboxidovorans OM5] ref|YP_004634189.1| hypothetical protein OCA5_c32720 [Oligotropha carboxidovorans OM5] gb|ACI91818.1| tetratricopeptide TPR_2 [Oligotropha carboxidovorans OM5] gb|AEI04318.1| hypothetical protein OCA4_c32200 [Oligotropha carboxidovorans OM4] gb|AEI07948.1| hypothetical protein OCA5_c32720 [Oligotropha carboxidovorans OM5] Length = 308 Score = 343 bits (881), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 186/308 (60%), Positives = 230/308 (74%) Query: 1 MAPRLFLSSGDLVADRRYEFARDLQLKGDLPAAAELLEQAIELVPKFPSAWYTLGKIRLE 60 M LFLSSGDL+ADRRY+FARDLQL+GDL AAA+L+ QA+E P F SAW+ LG+++ + Sbjct: 1 MPAPLFLSSGDLIADRRYDFARDLQLRGDLMAAADLMTQAVERAPHFASAWFALGELKQQ 60 Query: 61 LGQREAAIAAFRDARDADPEDRHGAGLHLMQLGVEAVSAMPPGYVQTLFDQYAPRFEAAL 120 L AI A+R A++ADP+DRHGA L LM+LGVE +S MPP YV+ LFDQYAP FE AL Sbjct: 61 LNLHGEAIRAYRKAQEADPQDRHGAKLRLMRLGVETLSEMPPAYVRALFDQYAPSFEHAL 120 Query: 121 VGDLGYRGPALLFKAVLSVRAGAKQPAFFKRAIDLGCGTGLAAGAFARHVDRFIGIDLSP 180 +L Y+GP LL KAVL G K+PAFFK AIDLGCGTGLAA AFA +VD FIGIDLSP Sbjct: 121 RTNLHYQGPELLLKAVLVACHGLKRPAFFKSAIDLGCGTGLAARAFAGNVDSFIGIDLSP 180 Query: 181 RMIDKAHATGLYAELEVDDMLKAISARREASAELILAADAMVYVADLAPVLAEANRVLVA 240 M+ +A TGLY LE DM++ + +A+ +L LAADA++Y+ADLAP L + +RVL Sbjct: 181 GMLAQAQTTGLYHRLEAADMVEGLKREADAAFDLALAADAVIYLADLAPALRDIHRVLRP 240 Query: 241 GGVLAFTTETHDGEDVIIGEGLRYAHSAAYVRASVAAAGLTLALLDDLSARNEDNIPAPG 300 G++AFTTETH G+ VIIG GLRYAH AA+VRA++A AGL L+ S R E +P PG Sbjct: 241 AGLVAFTTETHGGDGVIIGAGLRYAHGAAHVRAAIADAGLMPLSLEAASNRTESGVPVPG 300 Query: 301 LVAVAVKA 308 L+AVA KA Sbjct: 301 LIAVASKA 308