BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0163.0001.p (321 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767787.1| hypothetical protein blr1147 [Bradyrhizobium ja... 603 e-170 ref|YP_001236969.1| putative amino-acid ABC transport system, pe... 602 e-170 ref|YP_001208552.1| putative amino-acid ABC transport system, pe... 601 e-170 ref|YP_779666.1| extracellular ligand-binding receptor [Rhodopse... 575 e-162 ref|YP_567935.1| extracellular ligand-binding receptor [Rhodopse... 574 e-162 >ref|NP_767787.1| hypothetical protein blr1147 [Bradyrhizobium japonicum USDA 110] dbj|BAC46412.1| blr1147 [Bradyrhizobium japonicum USDA 110] Length = 424 Score = 603 bits (1554), Expect = e-170, Method: Compositional matrix adjust. Identities = 284/321 (88%), Positives = 306/321 (95%) Query: 1 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTSVHKYLNSKGVPQLLLNTGALKWN 60 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQT+VHKYLNSKGVPQLLLNTGA KWN Sbjct: 104 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWN 163 Query: 61 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPNAKVGILYQNDDFGRDFLGPFKKVLADAG 120 +PK FKWTMAGLPLYPTEARILA+HVVSVKPNAK+GILYQNDDFGRDFLGPFKKVL DAG Sbjct: 164 NPKEFKWTMAGLPLYPTEARILARHVVSVKPNAKIGILYQNDDFGRDFLGPFKKVLTDAG 223 Query: 121 GKAQVIMEQTYDLTDPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVTELGWKPLQLL 180 G AQVIMEQTYDLT+PTVDSQLINLSKSGADVFYNI+TGKA+SQSIRKV ELGWKPLQLL Sbjct: 224 GTAQVIMEQTYDLTEPTVDSQLINLSKSGADVFYNISTGKASSQSIRKVAELGWKPLQLL 283 Query: 181 SAGSTGRSILSAAGLENAKDIVAIRYNKEVGVPRYEKDPDVVAFEELRKKYLPNIDPDNT 240 SAGSTGRSIL+AAGLENA IVAIRYNKEVG+P++EKDPDV+AFEELRKKY P IDPDNT Sbjct: 284 SAGSTGRSILNAAGLENAAGIVAIRYNKEVGLPKWEKDPDVMAFEELRKKYTPAIDPDNT 343 Query: 241 IAFAGYGQAATMGEILRRCGDDLTRANVLKHATTLAGFHSPYFLEGINYSYTPDDYTPMK 300 IAFAGYGQA TMGEILRRCGDDLTRANVLK A+TLAGFHSPYFLEG+ YSYTP+DYTPMK Sbjct: 344 IAFAGYGQAVTMGEILRRCGDDLTRANVLKQASTLAGFHSPYFLEGVTYSYTPEDYTPMK 403 Query: 301 TLYVSIFNGRDWELSGEPMTE 321 TL++S F G+DW++S +PM+E Sbjct: 404 TLFISTFTGKDWDISDKPMSE 424 >ref|YP_001236969.1| putative amino-acid ABC transport system, periplasmic binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ33063.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 409 Score = 602 bits (1551), Expect = e-170, Method: Compositional matrix adjust. Identities = 284/321 (88%), Positives = 306/321 (95%) Query: 1 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTSVHKYLNSKGVPQLLLNTGALKWN 60 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQT+VHKYLNSKGVPQLLLNTGA KWN Sbjct: 89 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWN 148 Query: 61 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPNAKVGILYQNDDFGRDFLGPFKKVLADAG 120 DPKN+KWTMAGLPLYPTEARILAKHV+SVKP AK+GILYQNDDFGRDFLGPFKKVLADAG Sbjct: 149 DPKNYKWTMAGLPLYPTEARILAKHVLSVKPEAKIGILYQNDDFGRDFLGPFKKVLADAG 208 Query: 121 GKAQVIMEQTYDLTDPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVTELGWKPLQLL 180 GKAQVIMEQTYDLT+PTVDSQLINLSKSGADVFYNITTGKATSQSIRKV ELGWKPLQLL Sbjct: 209 GKAQVIMEQTYDLTEPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVAELGWKPLQLL 268 Query: 181 SAGSTGRSILSAAGLENAKDIVAIRYNKEVGVPRYEKDPDVVAFEELRKKYLPNIDPDNT 240 SAGSTGRSILSAAGLENAKDIVAIRY+K+ GVP+++ DPDV FE LR KYLPNIDPDNT Sbjct: 269 SAGSTGRSILSAAGLENAKDIVAIRYSKDAGVPQWKDDPDVKGFEALRAKYLPNIDPDNT 328 Query: 241 IAFAGYGQAATMGEILRRCGDDLTRANVLKHATTLAGFHSPYFLEGINYSYTPDDYTPMK 300 IA+AGYGQA +MGEILRRCGD LTR NVLK ATTLAGFHSP+FL+G+N++YTPDDYTPMK Sbjct: 329 IAYAGYGQAVSMGEILRRCGDTLTRENVLKQATTLAGFHSPFFLDGVNFAYTPDDYTPMK 388 Query: 301 TLYVSIFNGRDWELSGEPMTE 321 TLY+SIF+G+DW +S +PMTE Sbjct: 389 TLYISIFDGKDWSISEKPMTE 409 >ref|YP_001208552.1| putative amino-acid ABC transport system, periplasmic binding protein [Bradyrhizobium sp. ORS 278] emb|CAL80337.1| putative amino-acid ABC transport system, periplasmic binding protein [Bradyrhizobium sp. ORS 278] Length = 409 Score = 601 bits (1550), Expect = e-170, Method: Compositional matrix adjust. Identities = 283/321 (88%), Positives = 306/321 (95%) Query: 1 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTSVHKYLNSKGVPQLLLNTGALKWN 60 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQT+VHKYLNSKGVPQLLLNTGA KWN Sbjct: 89 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWN 148 Query: 61 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPNAKVGILYQNDDFGRDFLGPFKKVLADAG 120 DPK +KWTMAGLPLYPTEARILAKHV+SVKP AK+GILYQNDDFGRDFLGPFKKVLADAG Sbjct: 149 DPKTYKWTMAGLPLYPTEARILAKHVLSVKPEAKIGILYQNDDFGRDFLGPFKKVLADAG 208 Query: 121 GKAQVIMEQTYDLTDPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVTELGWKPLQLL 180 GKAQVIMEQTYDLT+PTVDSQLINLSKSGADVFYNITTGKATSQSIRKV ELGWKPLQLL Sbjct: 209 GKAQVIMEQTYDLTEPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVAELGWKPLQLL 268 Query: 181 SAGSTGRSILSAAGLENAKDIVAIRYNKEVGVPRYEKDPDVVAFEELRKKYLPNIDPDNT 240 SAGSTGRSILSAAGLENAKDIVAIRY+K+ GVP+++ DPDV FE LR KYLP+IDPDNT Sbjct: 269 SAGSTGRSILSAAGLENAKDIVAIRYSKDAGVPQWKDDPDVKGFEALRAKYLPSIDPDNT 328 Query: 241 IAFAGYGQAATMGEILRRCGDDLTRANVLKHATTLAGFHSPYFLEGINYSYTPDDYTPMK 300 IA+AGYGQA +MGEILRRCGD LTR NVLKHATTLAGFHSP+FL+G+N++YTPDDYTPMK Sbjct: 329 IAYAGYGQAVSMGEILRRCGDTLTRENVLKHATTLAGFHSPFFLDGVNFAYTPDDYTPMK 388 Query: 301 TLYVSIFNGRDWELSGEPMTE 321 TLY+SIF+G+DW +S +PMTE Sbjct: 389 TLYISIFDGKDWSISEKPMTE 409 >ref|YP_779666.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] gb|ABJ04686.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris BisA53] Length = 406 Score = 575 bits (1482), Expect = e-162, Method: Compositional matrix adjust. Identities = 269/321 (83%), Positives = 296/321 (92%) Query: 1 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTSVHKYLNSKGVPQLLLNTGALKWN 60 +DD+YSAPK VEATRRLVEQEEVLAL+GSLGTAPQT+VHKYLNSKGVPQLLLNTGA KWN Sbjct: 86 LDDSYSAPKAVEATRRLVEQEEVLALFGSLGTAPQTAVHKYLNSKGVPQLLLNTGASKWN 145 Query: 61 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPNAKVGILYQNDDFGRDFLGPFKKVLADAG 120 DPKNFKWTMAGLPLYPTEARILAKHV+SVKPNAKV ILYQNDDFGRDFLGPFKKVLADAG Sbjct: 146 DPKNFKWTMAGLPLYPTEARILAKHVLSVKPNAKVAILYQNDDFGRDFLGPFKKVLADAG 205 Query: 121 GKAQVIMEQTYDLTDPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVTELGWKPLQLL 180 G A+V+ E +YDLT+PT+DSQLINLSKSGADVFYNITTGKA+SQSIRKV ELGWKPL LL Sbjct: 206 GTAKVVAEASYDLTEPTIDSQLINLSKSGADVFYNITTGKASSQSIRKVAELGWKPLHLL 265 Query: 181 SAGSTGRSILSAAGLENAKDIVAIRYNKEVGVPRYEKDPDVVAFEELRKKYLPNIDPDNT 240 SAGSTGRSIL+AAG ENA IVAIRY KEVGVPR+E DP+V FEELR+KYLPN+D DNT Sbjct: 266 SAGSTGRSILNAAGPENAAGIVAIRYAKEVGVPRFENDPEVKGFEELRQKYLPNVDKDNT 325 Query: 241 IAFAGYGQAATMGEILRRCGDDLTRANVLKHATTLAGFHSPYFLEGINYSYTPDDYTPMK 300 IAFAGYGQA TM EILRRCGDDLTRANV+K A +L GFHSPY L+G+ YSYTPDDYTPMK Sbjct: 326 IAFAGYGQAVTMAEILRRCGDDLTRANVMKQAASLKGFHSPYMLDGVTYSYTPDDYTPMK 385 Query: 301 TLYVSIFNGRDWELSGEPMTE 321 TLY+S F+G+DW++S +P+TE Sbjct: 386 TLYISTFSGKDWDISDKPVTE 406 >ref|YP_567935.1| extracellular ligand-binding receptor [Rhodopseudomonas palustris BisB5] gb|ABE38034.1| Extracellular ligand-binding receptor [Rhodopseudomonas palustris BisB5] Length = 406 Score = 574 bits (1479), Expect = e-162, Method: Compositional matrix adjust. Identities = 267/321 (83%), Positives = 297/321 (92%) Query: 1 MDDAYSAPKCVEATRRLVEQEEVLALYGSLGTAPQTSVHKYLNSKGVPQLLLNTGALKWN 60 +DD+YS+PK VEATRRLVEQEEVLALYGSLGTAPQT+VHKYLNSK VPQLLLNTGA KWN Sbjct: 86 LDDSYSSPKAVEATRRLVEQEEVLALYGSLGTAPQTAVHKYLNSKKVPQLLLNTGASKWN 145 Query: 61 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPNAKVGILYQNDDFGRDFLGPFKKVLADAG 120 DPKNFKWTMAGLPLYPTEARILAKHVVSVKP+AK+ ILYQNDDFGRDFLGPFKKVL +AG Sbjct: 146 DPKNFKWTMAGLPLYPTEARILAKHVVSVKPDAKIAILYQNDDFGRDFLGPFKKVLEEAG 205 Query: 121 GKAQVIMEQTYDLTDPTVDSQLINLSKSGADVFYNITTGKATSQSIRKVTELGWKPLQLL 180 G+A+V+ E +YDLT+PT+DSQ+INLSKSGADVFYNITTGKATSQSIRKV ELGWKPLQLL Sbjct: 206 GRAKVVAEASYDLTEPTIDSQMINLSKSGADVFYNITTGKATSQSIRKVAELGWKPLQLL 265 Query: 181 SAGSTGRSILSAAGLENAKDIVAIRYNKEVGVPRYEKDPDVVAFEELRKKYLPNIDPDNT 240 SAGSTGRSIL+AAG+ENA IVAIRY+KEVGVPR+E DPDV AFEE R+KYLPN+D DNT Sbjct: 266 SAGSTGRSILNAAGIENATGIVAIRYSKEVGVPRFENDPDVKAFEEFRQKYLPNVDKDNT 325 Query: 241 IAFAGYGQAATMGEILRRCGDDLTRANVLKHATTLAGFHSPYFLEGINYSYTPDDYTPMK 300 IA+AGYGQ TM EILRRCGD+LTR NVLK AT+L GFHSPYFL+GI YSYT DDYTPMK Sbjct: 326 IAYAGYGQVVTMAEILRRCGDNLTRENVLKQATSLKGFHSPYFLDGIEYSYTSDDYTPMK 385 Query: 301 TLYVSIFNGRDWELSGEPMTE 321 TLY+S FNG+DW++S +P+TE Sbjct: 386 TLYISTFNGKDWDISDKPVTE 406