BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0162.0006.p (309 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769206.1| hypothetical protein bll2566 [Bradyrhizobium ja... 519 e-145 ref|YP_001240695.1| hypothetical protein BBta_4763 [Bradyrhizobi... 518 e-145 ref|YP_533183.1| hypothetical protein RPC_3322 [Rhodopseudomonas... 517 e-145 ref|YP_570179.1| hypothetical protein RPD_3052 [Rhodopseudomonas... 507 e-141 ref|YP_001206494.1| hypothetical protein BRADO4537 [Bradyrhizobi... 506 e-141 >ref|NP_769206.1| hypothetical protein bll2566 [Bradyrhizobium japonicum USDA 110] dbj|BAC47831.1| bll2566 [Bradyrhizobium japonicum USDA 110] Length = 309 Score = 519 bits (1337), Expect = e-145, Method: Compositional matrix adjust. Identities = 245/309 (79%), Positives = 270/309 (87%) Query: 1 MAAVSDDQSGFAPDDDAPIGYMKRTRDYYAAIGYTTPYRWAHYTSAPFQPLKKPLNQSRI 60 M+A DD+ GFAPD D+P+ YM+RTRDYYAAIGYTTPYRWAH+ APFQPLKKPL+QSR+ Sbjct: 1 MSASRDDEFGFAPDYDSPVPYMQRTRDYYAAIGYTTPYRWAHHVEAPFQPLKKPLSQSRV 60 Query: 61 AIITTAAPFDPARGDQGPGAKYNGGAKFYAVYDGDTSEQHDLRISHIAYDRTHTTATDSG 120 IITTAAP+DPA+GDQGPGA YNG AKFY VYDGDTS+ HDLRISHI YDR HT+ATDSG Sbjct: 61 TIITTAAPYDPAKGDQGPGAAYNGSAKFYQVYDGDTSKAHDLRISHIGYDRKHTSATDSG 120 Query: 121 TWFPLAQLKRLAAAGTIGEVAPRFFGAPTNRSHRVTIETDAPEILKRCRDDKVDAAVLVP 180 TWFPL QL + +AAG IGEVAPRFFGAPTNRSHRVT++TDAPEIL RC DKVD AVLVP Sbjct: 121 TWFPLPQLLKASAAGRIGEVAPRFFGAPTNRSHRVTLDTDAPEILARCLADKVDVAVLVP 180 Query: 181 NCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPQDVAS 240 NCPVCHQT +LVARHLE NGI TV+MGCAKDI+EHAAVPRFLFSDFPLGNSAGKP DV S Sbjct: 181 NCPVCHQTTALVARHLERNGIPTVIMGCAKDIIEHAAVPRFLFSDFPLGNSAGKPHDVTS 240 Query: 241 QAFTLELALRVLESAPGPQTTVQSPLRWSEDAAWKRDYSNADALSAEELARLRREFDAQK 300 QA TLELALR+LE+A GPQTT+QSPLRWSEDA+WK DY+N LS EELAR R EFD QK Sbjct: 241 QAQTLELALRLLETASGPQTTMQSPLRWSEDASWKLDYNNVAQLSPEELARRRAEFDKQK 300 Query: 301 EIAKGLRVA 309 EIA+G R A Sbjct: 301 EIARGNRAA 309 >ref|YP_001240695.1| hypothetical protein BBta_4763 [Bradyrhizobium sp. BTAi1] gb|ABQ36789.1| hypothetical protein BBta_4763 [Bradyrhizobium sp. BTAi1] Length = 308 Score = 518 bits (1335), Expect = e-145, Method: Compositional matrix adjust. Identities = 246/307 (80%), Positives = 268/307 (87%) Query: 1 MAAVSDDQSGFAPDDDAPIGYMKRTRDYYAAIGYTTPYRWAHYTSAPFQPLKKPLNQSRI 60 M A +DD+ GFAPD +AP+ YM RTRDYY AIGY TPYRWAHYTSAPFQPL+KPL QSR+ Sbjct: 1 MTAPTDDRLGFAPDSEAPLSYMARTRDYYLAIGYDTPYRWAHYTSAPFQPLRKPLTQSRV 60 Query: 61 AIITTAAPFDPARGDQGPGAKYNGGAKFYAVYDGDTSEQHDLRISHIAYDRTHTTATDSG 120 I+TTAAPFDPA+GDQGPGA YNG AKFY+VYDGDTS QHDLRISHIAYDRTHT+A DSG Sbjct: 61 TIVTTAAPFDPAKGDQGPGAPYNGSAKFYSVYDGDTSAQHDLRISHIAYDRTHTSAEDSG 120 Query: 121 TWFPLAQLKRLAAAGTIGEVAPRFFGAPTNRSHRVTIETDAPEILKRCRDDKVDAAVLVP 180 TWFPL QL RLA G IG V PRFFGAPTNRS RVTIETDAPEIL RCRDD +DA VLVP Sbjct: 121 TWFPLPQLIRLAREGRIGAVGPRFFGAPTNRSQRVTIETDAPEILARCRDDAIDAVVLVP 180 Query: 181 NCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPQDVAS 240 NCPVCHQTVSLVARHLEANGI+TVVMGCAKDIVEHAA PRFLFSDFPLGN+AGKP D +S Sbjct: 181 NCPVCHQTVSLVARHLEANGIATVVMGCAKDIVEHAAAPRFLFSDFPLGNAAGKPHDPSS 240 Query: 241 QAFTLELALRVLESAPGPQTTVQSPLRWSEDAAWKRDYSNADALSAEELARLRREFDAQK 300 QAFTL+LALRVLES+P +TTVQSPL+WSED +WK+DYSN L +ELAR R EFDAQK Sbjct: 241 QAFTLDLALRVLESSPAARTTVQSPLQWSEDHSWKQDYSNPALLPPDELARRRAEFDAQK 300 Query: 301 EIAKGLR 307 IA+GLR Sbjct: 301 AIARGLR 307 >ref|YP_533183.1| hypothetical protein RPC_3322 [Rhodopseudomonas palustris BisB18] gb|ABD88864.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB18] Length = 311 Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust. Identities = 246/307 (80%), Positives = 268/307 (87%) Query: 1 MAAVSDDQSGFAPDDDAPIGYMKRTRDYYAAIGYTTPYRWAHYTSAPFQPLKKPLNQSRI 60 MA ++Q GFA DDD PI YM RTRDYYAAIGYT PYRWAH+ APFQPL+KPL Q+R+ Sbjct: 1 MAVTRNEQPGFAADDDVPIPYMARTRDYYAAIGYTEPYRWAHHVGAPFQPLRKPLAQARL 60 Query: 61 AIITTAAPFDPARGDQGPGAKYNGGAKFYAVYDGDTSEQHDLRISHIAYDRTHTTATDSG 120 AI+TTAAPFDPA+GDQGPGA YNGGAKFY VYDGD++ HDLRISHIAYDR HTTA D Sbjct: 61 AIVTTAAPFDPAKGDQGPGAPYNGGAKFYQVYDGDSALPHDLRISHIAYDRIHTTAEDGN 120 Query: 121 TWFPLAQLKRLAAAGTIGEVAPRFFGAPTNRSHRVTIETDAPEILKRCRDDKVDAAVLVP 180 WFPL QL R AA G IGEVAPRFFGAPTNRSHRVTIETDAP IL RCR D+VDA VLVP Sbjct: 121 CWFPLPQLLRFAADGRIGEVAPRFFGAPTNRSHRVTIETDAPAILARCRADRVDAVVLVP 180 Query: 181 NCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPQDVAS 240 NCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKP+D S Sbjct: 181 NCPVCHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPRDPTS 240 Query: 241 QAFTLELALRVLESAPGPQTTVQSPLRWSEDAAWKRDYSNADALSAEELARLRREFDAQK 300 QAFTLELALR+L+SAPGPQTTVQSPLRW +DA+WKRDY+N A+S EELAR RR+FDAQK Sbjct: 241 QAFTLELALRLLDSAPGPQTTVQSPLRWRDDASWKRDYNNVAAMSPEELARRRRDFDAQK 300 Query: 301 EIAKGLR 307 + A+ +R Sbjct: 301 QRARAIR 307 >ref|YP_570179.1| hypothetical protein RPD_3052 [Rhodopseudomonas palustris BisB5] gb|ABE40278.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 310 Score = 507 bits (1305), Expect = e-141, Method: Compositional matrix adjust. Identities = 241/299 (80%), Positives = 264/299 (88%) Query: 9 SGFAPDDDAPIGYMKRTRDYYAAIGYTTPYRWAHYTSAPFQPLKKPLNQSRIAIITTAAP 68 +GFA +DD PI YM RTR YY AIGY PYRWAH +APF+PL KPL Q+R+A+ITTAAP Sbjct: 8 TGFASEDDVPIPYMARTRAYYQAIGYDVPYRWAHDVAAPFRPLTKPLAQARVALITTAAP 67 Query: 69 FDPARGDQGPGAKYNGGAKFYAVYDGDTSEQHDLRISHIAYDRTHTTATDSGTWFPLAQL 128 FDPA+GDQGPGA YNGGAKFY VYDGDTS+ HDLRISHIAYDRTHTTATDSG+WFPL QL Sbjct: 68 FDPAKGDQGPGAAYNGGAKFYQVYDGDTSQDHDLRISHIAYDRTHTTATDSGSWFPLPQL 127 Query: 129 KRLAAAGTIGEVAPRFFGAPTNRSHRVTIETDAPEILKRCRDDKVDAAVLVPNCPVCHQT 188 +RLA G IG+VAPRFFGAPTNRSHRVT +TDAPEIL RCR D VDAAVLVPNCPVCHQT Sbjct: 128 RRLAREGAIGDVAPRFFGAPTNRSHRVTTDTDAPEILARCRADNVDAAVLVPNCPVCHQT 187 Query: 189 VSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPQDVASQAFTLELA 248 VSLVARHLEA+G+STVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKP D ASQAFTLELA Sbjct: 188 VSLVARHLEAHGVSTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDDASQAFTLELA 247 Query: 249 LRVLESAPGPQTTVQSPLRWSEDAAWKRDYSNADALSAEELARLRREFDAQKEIAKGLR 307 LRVLE APGPQTTVQSPLRW DAAWKRDY+N A+SA+EL R R +F+AQK+ A+ +R Sbjct: 248 LRVLERAPGPQTTVQSPLRWRTDAAWKRDYNNVAAMSADELERRRCDFEAQKDRARAIR 306 >ref|YP_001206494.1| hypothetical protein BRADO4537 [Bradyrhizobium sp. ORS 278] emb|CAL78274.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 310 Score = 506 bits (1303), Expect = e-141, Method: Compositional matrix adjust. Identities = 241/303 (79%), Positives = 260/303 (85%) Query: 5 SDDQSGFAPDDDAPIGYMKRTRDYYAAIGYTTPYRWAHYTSAPFQPLKKPLNQSRIAIIT 64 S D GFAPDD AP+ YM RTRDYY AIGY TPYRWAHY SAP Q L+KPL QSR+ +IT Sbjct: 4 SSDPLGFAPDDTAPLAYMARTRDYYLAIGYDTPYRWAHYISAPLQKLRKPLAQSRVTLIT 63 Query: 65 TAAPFDPARGDQGPGAKYNGGAKFYAVYDGDTSEQHDLRISHIAYDRTHTTATDSGTWFP 124 TAAP+DPA+GDQGPGA YNGGAKFY+VYDGDTS HDLRISHIAYDRTHTTA DS TWFP Sbjct: 64 TAAPYDPAKGDQGPGAPYNGGAKFYSVYDGDTSATHDLRISHIAYDRTHTTAADSNTWFP 123 Query: 125 LAQLKRLAAAGTIGEVAPRFFGAPTNRSHRVTIETDAPEILKRCRDDKVDAAVLVPNCPV 184 L QL RLA+ G +G V PRFFGAPTNRS RVTIE DAPEIL RCR D++DA VLVPNCPV Sbjct: 124 LPQLLRLASEGRVGAVGPRFFGAPTNRSQRVTIEQDAPEILARCRADEIDAVVLVPNCPV 183 Query: 185 CHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPQDVASQAFT 244 CHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKP D ASQAFT Sbjct: 184 CHQTVSLVARHLEANGISTVVMGCAKDIVEHAAVPRFLFSDFPLGNSAGKPHDAASQAFT 243 Query: 245 LELALRVLESAPGPQTTVQSPLRWSEDAAWKRDYSNADALSAEELARLRREFDAQKEIAK 304 LEL L VLES+P +TTVQSPL+WS+D +WKRDYSN L+ EELAR R EFDAQK IA+ Sbjct: 244 LELTLDVLESSPAGRTTVQSPLQWSDDHSWKRDYSNPALLAPEELARRRAEFDAQKAIAR 303 Query: 305 GLR 307 G+R Sbjct: 304 GIR 306