BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0035.p (224 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770020.1| hypothetical protein bll3380 [Bradyrhizobium ja... 321 6e-86 ref|YP_001206723.1| hypothetical protein BRADO4780 [Bradyrhizobi... 263 1e-68 ref|YP_001240744.1| hypothetical protein BBta_4814 [Bradyrhizobi... 262 2e-68 ref|ZP_01746880.1| hypothetical protein SSE37_21575 [Sagittula s... 206 2e-51 ref|ZP_07375936.1| inner membrane protein YqiK [Ahrensia sp. R2A... 190 1e-46 >ref|NP_770020.1| hypothetical protein bll3380 [Bradyrhizobium japonicum USDA 110] dbj|BAC48645.1| bll3380 [Bradyrhizobium japonicum USDA 110] Length = 966 Score = 321 bits (822), Expect = 6e-86, Method: Compositional matrix adjust. Identities = 180/203 (88%), Positives = 186/203 (91%), Gaps = 4/203 (1%) Query: 24 IRATEAAERVVTARESEIAKRRKTVEVLLAEKQAEETRIAAEAERVRAAVEAEAQRLLNE 83 I ATEA ERV+TARESEIA+RRKTVEVLLAEKQAEETRIAA+AERVRA VEAEAQR+LNE Sbjct: 764 IHATEATERVITARESEIARRRKTVEVLLAEKQAEETRIAADAERVRATVEAEAQRMLNE 823 Query: 84 AENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHGNGTGRSA 143 AENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHG GRSA Sbjct: 824 AENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHGGNGGRSA 883 Query: 144 TDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIKDSARKSGGD-- 201 TDEVIDSALRYRVQAPLIDSIL+DIGVEGGSLAKMPGLIREARDMQGIK+SARK GGD Sbjct: 884 TDEVIDSALRYRVQAPLIDSILADIGVEGGSLAKMPGLIREARDMQGIKESARKGGGDKP 943 Query: 202 -AKPAAPEGGGEPARPERTPRKK 223 A P A EGGGEP ER PRKK Sbjct: 944 AASPPATEGGGEPP-AERGPRKK 965 >ref|YP_001206723.1| hypothetical protein BRADO4780 [Bradyrhizobium sp. ORS 278] emb|CAL78506.1| conserved hypothetical protein, putative membrane protein [Bradyrhizobium sp. ORS 278] Length = 963 Score = 263 bits (673), Expect = 1e-68, Method: Compositional matrix adjust. Identities = 170/204 (83%), Positives = 176/204 (86%), Gaps = 3/204 (1%) Query: 21 EPXIRATEAAERVVTARESEIAKRRKTVEVLLAEKQAEETRIAAEAERVRAAVEAEAQRL 80 E RATEAAE+V+TARESEIA+RRKTVEVLLAEK AEETRIAAEAERVRAAVEAEAQRL Sbjct: 761 EARTRATEAAEKVITARESEIARRRKTVEVLLAEKHAEETRIAAEAERVRAAVEAEAQRL 820 Query: 81 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHGNGTG 140 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNG G G Sbjct: 821 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGGGGNGG 880 Query: 141 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGI-KDSARKSG 199 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGI KD+A + Sbjct: 881 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIRKDTAARKD 940 Query: 200 GDAKPAAPEGGGEPARPERTPRKK 223 PA +R PRKK Sbjct: 941 AGGGAGDGAPPEPPA--DRGPRKK 962 >ref|YP_001240744.1| hypothetical protein BBta_4814 [Bradyrhizobium sp. BTAi1] gb|ABQ36838.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 964 Score = 262 bits (670), Expect = 2e-68, Method: Compositional matrix adjust. Identities = 161/181 (88%), Positives = 167/181 (92%), Gaps = 2/181 (1%) Query: 21 EPXIRATEAAERVVTARESEIAKRRKTVEVLLAEKQAEETRIAAEAERVRAAVEAEAQRL 80 E RATEA E+V+TARESEIA+RRKTVEVL+AEKQAEETRIAAEAERVRAAVEAEAQRL Sbjct: 761 EARTRATEATEKVITARESEIARRRKTVEVLIAEKQAEETRIAAEAERVRAAVEAEAQRL 820 Query: 81 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHGNGTG 140 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNG+G G Sbjct: 821 LNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGHGGNGNGG 880 Query: 141 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIKD--SARKS 198 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGI+ SARK Sbjct: 881 RSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIRKEASARKD 940 Query: 199 G 199 Sbjct: 941 A 941 >ref|ZP_01746880.1| hypothetical protein SSE37_21575 [Sagittula stellata E-37] gb|EBA07432.1| hypothetical protein SSE37_21575 [Sagittula stellata E-37] Length = 965 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 119/183 (65%), Positives = 143/183 (78%), Gaps = 5/183 (2%) Query: 32 RVVTARESEIAKRRKTVEVLLAEKQAEETRIAAEAERVRAAVEAEAQRLLNEAENVLTDQ 91 +V T RE+E A RRK+++V +AEK A E ++ AE E+VR AVEAEAQ+L+NEAENVLTD Sbjct: 783 KVKTVRETEAANRRKSIDVTMAEKAAAEAKLIAEGEKVRKAVEAEAQKLINEAENVLTDP 842 Query: 92 ARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDGLNGNGHGNGTGRSATDEVIDSA 151 AR SLFRRKLL+ +EGIV SVKP+EKI+ IRI+Q+DG+ G G GN +G S TDEVI+SA Sbjct: 843 ARASLFRRKLLEHVEGIVSASVKPLEKIQDIRIMQLDGVTGGG-GNRSG-SPTDEVINSA 900 Query: 152 LRYRVQAPLIDSILSDIGVEGGSLAKMPGLIREARDMQGIKDSARKSG-GDAKPA--APE 208 LRYRVQAPLIDS+LSDIG+EGG LAK GLIREA DM+ I D+ KS GD P APE Sbjct: 901 LRYRVQAPLIDSLLSDIGIEGGGLAKQGGLIREASDMKRISDAVEKSARGDDTPGGDAPE 960 Query: 209 GGG 211 G Sbjct: 961 AKG 963 >ref|ZP_07375936.1| inner membrane protein YqiK [Ahrensia sp. R2A130] gb|EFL87830.1| inner membrane protein YqiK [Ahrensia sp. R2A130] Length = 1112 Score = 190 bits (483), Expect = 1e-46, Method: Compositional matrix adjust. Identities = 111/210 (52%), Positives = 149/210 (70%), Gaps = 16/210 (7%) Query: 13 VPSSGAMLEPXI---RATEAAERVVTARESEIAKRRKTVEVLLAEKQAEETRIAAEAERV 69 + S A E I A EA E+ TA E EIA+RR++V+V +AEKQA+E RIAA+AE+V Sbjct: 901 LDESAAHAESEIARAHAVEATEKAKTAGEKEIAERRRSVDVTMAEKQADEKRIAAKAEQV 960 Query: 70 RAAVEAEAQRLLNEAENVLTDQARYSLFRRKLLDRIEGIVRESVKPMEKIEGIRILQVDG 129 RAAVEAEAQRL+NEAENVLTD+AR+SLF+RK+L+ +EGIV S KP+EKI I+I+Q+ G Sbjct: 961 RAAVEAEAQRLINEAENVLTDEARHSLFKRKMLEHVEGIVSASAKPLEKINDIKIMQLGG 1020 Query: 130 LNGNG-----------HGNGTGRSATDEVIDSALRYRVQAPLIDSILSDIGVEGGSLAKM 178 G G G G S TDEV++SALRYRVQAP++DS+LSDIG++G ++A+ Sbjct: 1021 SGTTGLDWANGAVNGGGGGGAGGSPTDEVMNSALRYRVQAPMVDSLLSDIGLDGSNIAR- 1079 Query: 179 PGLIREARDMQGIKDSARKSGGDA-KPAAP 207 + R+A DM A+K+ GD+ KP++ Sbjct: 1080 STIFRDASDMSRAASEAKKAAGDSGKPSSK 1109