BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0161.0024.p         (133 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07026426.1| protein of unknown function DUF1232 [Afipia s...   146   1e-33
ref|YP_497069.1| hypothetical protein Saro_1795 [Novosphingobium...   140   5e-32
ref|ZP_03506390.1| hypothetical protein RetlB5_13524 [Rhizobium ...   140   8e-32
ref|ZP_07376966.1| protein of unknown function DUF1232 [Pantoea ...   139   1e-31
gb|EGE56848.1| hypothetical protein RHECNPAF_560016 [Rhizobium e...   138   3e-31

>ref|ZP_07026426.1| protein of unknown function DUF1232 [Afipia sp. 1NLS2]
 gb|EFI53568.1| protein of unknown function DUF1232 [Afipia sp. 1NLS2]
          Length = 124

 Score =  146 bits (368), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/121 (60%), Positives = 91/121 (75%)

Query: 6   LSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLD 65
           L+ +K WAR +KRD  A+YLASRDPRVPWYAK L +AVAAYALSPIDLIPDFIPV+GYLD
Sbjct: 2   LAQMKQWARLIKRDVHAIYLASRDPRVPWYAKILGIAVAAYALSPIDLIPDFIPVLGYLD 61

Query: 66  DLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIVVLWIAGAAALAWAAF 125
           DLI++PLG+ L + L+P +VMAE R  ASA   +P S  G   IV +WI  A ++ W  +
Sbjct: 62  DLIIVPLGVALVVKLIPPDVMAEHRELASAAQDQPVSVTGATVIVAIWILAALSVGWLIY 121

Query: 126 R 126
           +
Sbjct: 122 K 122


>ref|YP_497069.1| hypothetical protein Saro_1795 [Novosphingobium aromaticivorans DSM
           12444]
 gb|ABD26235.1| protein of unknown function DUF1232 [Novosphingobium
           aromaticivorans DSM 12444]
          Length = 130

 Score =  140 bits (354), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 77/121 (63%), Positives = 94/121 (77%), Gaps = 1/121 (0%)

Query: 2   SSTKLSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVI 61
           S T    I+ WAR++KRD VAL+LA+RDPRVP  AK ++  VAAYALSPIDLIPDFIPVI
Sbjct: 3   SGTTGRRIRAWARDIKRDVVALWLAARDPRVPVAAKIVSGIVAAYALSPIDLIPDFIPVI 62

Query: 62  GYLDDLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIVVLWIAGAAALA 121
           GYLDD+IL+PLGI LAI L+P  VMA+ R +A   V RP S AG++AI+++WIAG  AL 
Sbjct: 63  GYLDDVILVPLGILLAIRLIPAGVMAQLREQALK-VGRPRSAAGLVAILLVWIAGVTALG 121

Query: 122 W 122
           W
Sbjct: 122 W 122


>ref|ZP_03506390.1| hypothetical protein RetlB5_13524 [Rhizobium etli Brasil 5]
          Length = 167

 Score =  140 bits (352), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 91/109 (83%)

Query: 6   LSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLD 65
           +S  K WA++LKRD VAL+LA+RD RVPWYAKA+A AVA YALSP+DLIPDFIPV+GYLD
Sbjct: 45  ISKAKNWAKSLKRDIVALWLAARDARVPWYAKAVAGAVATYALSPVDLIPDFIPVLGYLD 104

Query: 66  DLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIVVLWI 114
           DL+++PLGI LA  LVP ++M+E R +A+  ++RP+ R+G+I I+ +W+
Sbjct: 105 DLVIVPLGILLATRLVPPDLMSELREEAARRIERPSGRSGLIFILAVWL 153


>ref|ZP_07376966.1| protein of unknown function DUF1232 [Pantoea sp. aB]
 gb|EFM21698.1| protein of unknown function DUF1232 [Pantoea sp. aB]
          Length = 128

 Score =  139 bits (350), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 71/125 (56%), Positives = 90/125 (72%), Gaps = 3/125 (2%)

Query: 6   LSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLD 65
           ++ IK WARN+KRD  A++LA+RDPR P  AK +A+ VAAYA+SPIDLIPDFIPVIGYLD
Sbjct: 1   MTDIKTWARNIKRDVHAVWLAARDPRTPLVAKVMAMIVAAYAVSPIDLIPDFIPVIGYLD 60

Query: 66  DLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIVVLWIAGAAAL---AW 122
           DLI++PLGI L + L+P EVM E R  A+   +RP SR     ++ +WI GA  L     
Sbjct: 61  DLIIVPLGIMLVVRLIPPEVMREHRETAAQASKRPVSRVTAGIVIAIWIVGATVLFSQIV 120

Query: 123 AAFRY 127
           AAFR+
Sbjct: 121 AAFRH 125


>gb|EGE56848.1| hypothetical protein RHECNPAF_560016 [Rhizobium etli CNPAF512]
          Length = 126

 Score =  138 bits (347), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 67/109 (61%), Positives = 91/109 (83%)

Query: 6   LSSIKVWARNLKRDSVALYLASRDPRVPWYAKALAVAVAAYALSPIDLIPDFIPVIGYLD 65
           +S  K WA++LKRD VAL+LA+RD RVPWYAKA+A AVA YALSP+DLIPDFIPV+GYLD
Sbjct: 4   ISKAKNWAKSLKRDIVALWLAARDARVPWYAKAVAGAVATYALSPVDLIPDFIPVLGYLD 63

Query: 66  DLILLPLGIWLAISLVPDEVMAECRAKASAVVQRPTSRAGMIAIVVLWI 114
           DL+++PLGI LA  LVP ++M+E R +A+  ++RP+ R+G+I I+ +W+
Sbjct: 64  DLVIVPLGILLATRLVPPDLMSELREEAARRIERPSGRSGLIFILAVWL 112