BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0021.p (206 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207352.1| two-component LuxR family response regulator... 347 4e-94 ref|YP_001241787.1| two component LuxR family transcriptional re... 346 1e-93 ref|NP_772825.1| two-component response regulator [Bradyrhizobiu... 340 9e-92 ref|YP_781737.1| two component LuxR family transcriptional regul... 313 9e-84 ref|ZP_08072444.1| two component transcriptional regulator, LuxR... 242 3e-62 >ref|YP_001207352.1| two-component LuxR family response regulator [Bradyrhizobium sp. ORS 278] emb|CAL79135.1| putative two-component response regulator, with HTH luxR family [Bradyrhizobium sp. ORS 278] Length = 206 Score = 347 bits (891), Expect = 4e-94, Method: Compositional matrix adjust. Identities = 166/206 (80%), Positives = 190/206 (92%) Query: 1 MRILIVDDHPIVASGCRTVFADDPEITLLEAADAESGERAFVAEKPDLCVIDINLPTVSG 60 MRILIVDDHPIVASGCR + + D ++ L+EAADAESGE +F+A +PD+CV+DINLPTVSG Sbjct: 1 MRILIVDDHPIVASGCRALLSGDADLELIEAADAESGEASFIARRPDVCVVDINLPTVSG 60 Query: 61 FELARRILTHDASARLIMFSMNDDPVFAARAIDIGAKGYVSKTGDPNDLVEAVREVGNGG 120 FELARRIL HDA+ARLIMFSMNDDPVFAARAIDIGAKGYVSK+GDPNDL EA+REV +GG Sbjct: 61 FELARRILAHDANARLIMFSMNDDPVFAARAIDIGAKGYVSKSGDPNDLAEAIREVFSGG 120 Query: 121 VYLPPAIARNVAFARPGFAQNPLSKLTSREMEILRLLSSGKSLSEIAWLVHSSYKTVANT 180 YLPPAIAR++AFA AQ+PL+KLTSRE+EILRLLS+GKSL+EIAWL+HSSYKTVANT Sbjct: 121 SYLPPAIARSIAFAGAAVAQSPLAKLTSRELEILRLLSAGKSLTEIAWLIHSSYKTVANT 180 Query: 181 SSIMRQKLGVRTSAELVRLAIESGVA 206 SSI+RQKLGVRTS ELVRLAIE+GVA Sbjct: 181 SSIIRQKLGVRTSGELVRLAIENGVA 206 >ref|YP_001241787.1| two component LuxR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37881.1| two component transcriptional regulator, LuxR family [Bradyrhizobium sp. BTAi1] Length = 206 Score = 346 bits (887), Expect = 1e-93, Method: Compositional matrix adjust. Identities = 167/206 (81%), Positives = 188/206 (91%) Query: 1 MRILIVDDHPIVASGCRTVFADDPEITLLEAADAESGERAFVAEKPDLCVIDINLPTVSG 60 MR+LIVDDHPIVASGCR + + DP++ LLEA+DAESGE +FVA +PD+ VIDINLPTVSG Sbjct: 1 MRVLIVDDHPIVASGCRALLSTDPDLELLEASDAESGEASFVARRPDVSVIDINLPTVSG 60 Query: 61 FELARRILTHDASARLIMFSMNDDPVFAARAIDIGAKGYVSKTGDPNDLVEAVREVGNGG 120 FELARRIL H+ASARLIMFSMNDDPVFAARAIDIGAKGYVSK+GDPNDL EA+REV GG Sbjct: 61 FELARRILAHEASARLIMFSMNDDPVFAARAIDIGAKGYVSKSGDPNDLAEAIREVARGG 120 Query: 121 VYLPPAIARNVAFARPGFAQNPLSKLTSREMEILRLLSSGKSLSEIAWLVHSSYKTVANT 180 YLPPAIAR++AFA AQ+PL+KLT RE+EILRLLS+GKSLSEIAWL+HSSYKTVANT Sbjct: 121 SYLPPAIARSIAFAGATVAQSPLAKLTPRELEILRLLSAGKSLSEIAWLIHSSYKTVANT 180 Query: 181 SSIMRQKLGVRTSAELVRLAIESGVA 206 SSI+RQKLGVRTS ELVRLAIE+GVA Sbjct: 181 SSIIRQKLGVRTSGELVRLAIENGVA 206 >ref|NP_772825.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC51450.1| two-component response regulator [Bradyrhizobium japonicum USDA 110] Length = 239 Score = 340 bits (871), Expect = 9e-92, Method: Compositional matrix adjust. Identities = 166/206 (80%), Positives = 182/206 (88%) Query: 1 MRILIVDDHPIVASGCRTVFADDPEITLLEAADAESGERAFVAEKPDLCVIDINLPTVSG 60 MRILIVDDHPIVASGCR V AD+ EI +LEAADAE GE F+ E+PDLCVIDINLPTVSG Sbjct: 34 MRILIVDDHPIVASGCRAVLADEGEIEILEAADAEDGECVFIVERPDLCVIDINLPTVSG 93 Query: 61 FELARRILTHDASARLIMFSMNDDPVFAARAIDIGAKGYVSKTGDPNDLVEAVREVGNGG 120 FELARRIL AR+IMFSMNDDP FAARAI+ GAKGYVSKTGDP+DLVEA+R VG+GG Sbjct: 94 FELARRILERAPEARIIMFSMNDDPAFAARAIECGAKGYVSKTGDPDDLVEAIRTVGSGG 153 Query: 121 VYLPPAIARNVAFARPGFAQNPLSKLTSREMEILRLLSSGKSLSEIAWLVHSSYKTVANT 180 YLP AIAR++AFA P AQ+PLSKL +REMEILRLLS+GKSLSEIAWLV SSYKTVANT Sbjct: 154 TYLPSAIARSIAFAGPALAQSPLSKLNAREMEILRLLSAGKSLSEIAWLVQSSYKTVANT 213 Query: 181 SSIMRQKLGVRTSAELVRLAIESGVA 206 SSIMRQKLGV+TS ELVRLAI+SGVA Sbjct: 214 SSIMRQKLGVKTSVELVRLAIDSGVA 239 >ref|YP_781737.1| two component LuxR family transcriptional regulator [Rhodopseudomonas palustris BisA53] gb|ABJ06757.1| two component transcriptional regulator, LuxR family [Rhodopseudomonas palustris BisA53] Length = 210 Score = 313 bits (802), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 148/205 (72%), Positives = 177/205 (86%) Query: 1 MRILIVDDHPIVASGCRTVFADDPEITLLEAADAESGERAFVAEKPDLCVIDINLPTVSG 60 MR+LIVDDHPI+ASGCR +FA DPEI +LEA DAESGER FV E+PD+CV+DINLP VSG Sbjct: 1 MRVLIVDDHPIIASGCRALFAGDPEIEILEAHDAESGERGFVTERPDVCVLDINLPGVSG 60 Query: 61 FELARRILTHDASARLIMFSMNDDPVFAARAIDIGAKGYVSKTGDPNDLVEAVREVGNGG 120 FELARRIL + AR+IMFSMNDDP FAARAI+ GAKGYVSK GDP DL +A+REVG GG Sbjct: 61 FELARRILAREPGARIIMFSMNDDPAFAARAIEAGAKGYVSKAGDPCDLADAIREVGEGG 120 Query: 121 VYLPPAIARNVAFARPGFAQNPLSKLTSREMEILRLLSSGKSLSEIAWLVHSSYKTVANT 180 VYL PA A+++AFA G +N L+KL +RE+EILRL+++G SLSEIAW V +SYKT+ANT Sbjct: 121 VYLAPATAKSIAFAAIGSPENRLAKLNAREIEILRLIAAGNSLSEIAWQVRASYKTIANT 180 Query: 181 SSIMRQKLGVRTSAELVRLAIESGV 205 SS+MRQKLGVR+SAEL+RLAI+SG+ Sbjct: 181 SSLMRQKLGVRSSAELMRLAIQSGL 205 >ref|ZP_08072444.1| two component transcriptional regulator, LuxR family [Methylocystis sp. ATCC 49242] gb|EFX99876.1| two component transcriptional regulator, LuxR family [Methylocystis sp. ATCC 49242] Length = 206 Score = 242 bits (617), Expect = 3e-62, Method: Compositional matrix adjust. Identities = 118/206 (57%), Positives = 154/206 (74%) Query: 1 MRILIVDDHPIVASGCRTVFADDPEITLLEAADAESGERAFVAEKPDLCVIDINLPTVSG 60 MR+LIVDDHPI+ SGC + A + +I +++A DAE+G AFV KPD+ V+DI LP VSG Sbjct: 1 MRVLIVDDHPIIVSGCAAMLAAEGDIDVVDARDAETGLAAFVEHKPDVTVVDIGLPGVSG 60 Query: 61 FELARRILTHDASARLIMFSMNDDPVFAARAIDIGAKGYVSKTGDPNDLVEAVREVGNGG 120 FEL RRIL A +++FSMNDDP+FAARAI+ GAKGYV+K DP L+EAVREV +GG Sbjct: 61 FELTRRILDQKPQALIVVFSMNDDPIFAARAIEAGAKGYVTKNDDPFLLLEAVREVASGG 120 Query: 121 VYLPPAIARNVAFARPGFAQNPLSKLTSREMEILRLLSSGKSLSEIAWLVHSSYKTVANT 180 V+L P IA +AF + G A NPL+ LT+RE+EILR+L SG ++EIA SYKT+AN+ Sbjct: 121 VFLMPKIANQLAFEKRGGAANPLAALTARELEILRMLGSGLGMAEIAEATQVSYKTIANS 180 Query: 181 SSIMRQKLGVRTSAELVRLAIESGVA 206 SIM++KLG RT EL+R+A+ +A Sbjct: 181 CSIMKRKLGARTPMELMRIALAQKLA 206