BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0018.p (393 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772828.1| hypothetical protein blr6188 [Bradyrhizobium ja... 679 0.0 ref|YP_783582.1| hypothetical protein RPE_4682 [Rhodopseudomonas... 640 0.0 ref|YP_001241790.1| hypothetical protein BBta_5945 [Bradyrhizobi... 640 0.0 ref|YP_001207355.1| hypothetical protein BRADO5462 [Bradyrhizobi... 613 e-173 emb|CAJ01643.1| conserved hypothetical protein, similar to blr61... 503 e-140 >ref|NP_772828.1| hypothetical protein blr6188 [Bradyrhizobium japonicum USDA 110] dbj|BAC51453.1| blr6188 [Bradyrhizobium japonicum USDA 110] Length = 393 Score = 679 bits (1751), Expect = 0.0, Method: Compositional matrix adjust. Identities = 322/393 (81%), Positives = 354/393 (90%) Query: 1 MLRWLIGTIALSMVATGALAADPVEVHIGYLGHAGVKSTLSLVEQPADNDGIAGARLAIE 60 M+RWL+G I L + AT A AADPV + +GYLG AG +STLSLVEQPA+NDG+AGARLAIE Sbjct: 1 MIRWLVGLIGLGLAATSAFAADPVMIGVGYLGLAGTRSTLSLVEQPAENDGVAGARLAIE 60 Query: 61 DNNTTGKFLNQRFVLDEVKVKDSDDVAKVATDFAGRNDYIITDLPADALLKVADALRDRG 120 DNNTTGKFL QRF L+E ++++ +D + AT A +N ++I DLPADALLKVADALR+RG Sbjct: 61 DNNTTGKFLGQRFALEERRIREGEDAVQAATALAKKNGFVIADLPADALLKVADALRERG 120 Query: 121 TVLLNAGAIDDRLREQDCRANVIHIAPTRSMLADALGQYLVWKQWKRWLLVVGSHDQDKL 180 T+L NAGAID+RLRE DCRANVIH APTR+MLADALGQYLVWKQWKRWLLVVGSHD+DKL Sbjct: 121 TLLFNAGAIDERLREADCRANVIHTAPTRAMLADALGQYLVWKQWKRWLLVVGSHDEDKL 180 Query: 181 YADALRRAATRFGAKIVQERTFEDTGGARRTDSGVTLIQRQMPVFTQQAPAYDVLVAADE 240 +ADALRR ATRFGAKIVQERTFED GGARRTDSGVTLIQRQMPVFTQQAP+YDVLVAADE Sbjct: 181 FADALRRTATRFGAKIVQERTFEDAGGARRTDSGVTLIQRQMPVFTQQAPSYDVLVAADE 240 Query: 241 SEVFANYLPYRTWDPRPVAGSAGLVPTSWDAAHDQWGAVQIQNRFVKLNMRRMTALDMQA 300 SEVF YLPYRTWDPRPVAGSAGLVP SWDAA DQWGA+Q+QNRF+KLN RRMTALDMQA Sbjct: 241 SEVFGAYLPYRTWDPRPVAGSAGLVPRSWDAAQDQWGAIQMQNRFIKLNSRRMTALDMQA 300 Query: 301 WTAARMIGEATSRTNSGDPKKVIAFLKGKDFSIAAFKGTRLTLRDWNLQLRQPILLADGR 360 WTA RMIGEATSRTNSGD KKV F+KG DFS+AAFKGTRLTLRDWNLQLRQPILL DGR Sbjct: 301 WTAVRMIGEATSRTNSGDVKKVADFIKGPDFSVAAFKGTRLTLRDWNLQLRQPILLVDGR 360 Query: 361 MVVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 393 MVVSVSPQEGFLHQVSELDTLG DRPE+KCKL+ Sbjct: 361 MVVSVSPQEGFLHQVSELDTLGYDRPESKCKLK 393 >ref|YP_783582.1| hypothetical protein RPE_4682 [Rhodopseudomonas palustris BisA53] gb|ABJ08602.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 393 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 302/392 (77%), Positives = 342/392 (87%) Query: 1 MLRWLIGTIALSMVATGALAADPVEVHIGYLGHAGVKSTLSLVEQPADNDGIAGARLAIE 60 M+R LIG + ++ + + A P+E+ +GYLG A + TLSLVEQPA+NDGIAGARLAIE Sbjct: 1 MIRSLIGGMLMTTLVSAVSTAAPIEIKLGYLGPATMPQTLSLVEQPAENDGIAGARLAIE 60 Query: 61 DNNTTGKFLNQRFVLDEVKVKDSDDVAKVATDFAGRNDYIITDLPADALLKVADALRDRG 120 DNNTTG+F NQRFVL+E+++K DD A A D A R +I+ DL AD LLKVADA+RDRG Sbjct: 61 DNNTTGQFTNQRFVLEELRLKQGDDAATAARDLAERASFIVADLGADDLLKVADAVRDRG 120 Query: 121 TVLLNAGAIDDRLREQDCRANVIHIAPTRSMLADALGQYLVWKQWKRWLLVVGSHDQDKL 180 T++LNAGA DDRLR+QDCR NVIH+APTR+MLADAL QYLVWKQWKRWLLV GSH DKL Sbjct: 121 TLILNAGATDDRLRQQDCRGNVIHVAPTRAMLADALAQYLVWKQWKRWLLVSGSHPNDKL 180 Query: 181 YADALRRAATRFGAKIVQERTFEDTGGARRTDSGVTLIQRQMPVFTQQAPAYDVLVAADE 240 +ADALRRAATRFGAKIVQER FEDTGGARRTDSGVTLIQRQMPVFTQ APAYDVLVAADE Sbjct: 181 FADALRRAATRFGAKIVQERIFEDTGGARRTDSGVTLIQRQMPVFTQSAPAYDVLVAADE 240 Query: 241 SEVFANYLPYRTWDPRPVAGSAGLVPTSWDAAHDQWGAVQIQNRFVKLNMRRMTALDMQA 300 SEVFANYLPYR+WDPRP+AGSAGL P SWDAAHDQWGA+Q+QNRF+KLN RRM+A DMQA Sbjct: 241 SEVFANYLPYRSWDPRPIAGSAGLKPVSWDAAHDQWGAIQLQNRFMKLNSRRMSARDMQA 300 Query: 301 WTAARMIGEATSRTNSGDPKKVIAFLKGKDFSIAAFKGTRLTLRDWNLQLRQPILLADGR 360 WTA RMIGEA SRTNSGD ++A++K +F +AAFKG RLTLRDWNLQLRQPILLADGR Sbjct: 301 WTAVRMIGEAASRTNSGDATTLLAYIKSPNFEVAAFKGQRLTLRDWNLQLRQPILLADGR 360 Query: 361 MVVSVSPQEGFLHQVSELDTLGVDRPETKCKL 392 MVVSVSPQEGFLHQVSELDTLG+DRPE++CKL Sbjct: 361 MVVSVSPQEGFLHQVSELDTLGIDRPESQCKL 392 >ref|YP_001241790.1| hypothetical protein BBta_5945 [Bradyrhizobium sp. BTAi1] gb|ABQ37884.1| amino acid/amide ABC transporter substrate-binding protein, HAAT family [Bradyrhizobium sp. BTAi1] Length = 400 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 310/393 (78%), Positives = 342/393 (87%), Gaps = 2/393 (0%) Query: 1 MLRWLIGTIALSMVATGALAADPVEVHIGYLGHAGVKSTLSLVEQPADNDGIAGARLAIE 60 + R LIG I L AT A AA+PV++ IGYLG AG TLS ++QPA +DG+AGARLAIE Sbjct: 10 LARCLIGAIGL--FATAAHAAEPVDIAIGYLGRAGAPQTLSPLDQPAPDDGVAGARLAIE 67 Query: 61 DNNTTGKFLNQRFVLDEVKVKDSDDVAKVATDFAGRNDYIITDLPADALLKVADALRDRG 120 DNNTTGKFLNQRF L + +VKD +D A+ A + AG+ +I+ DLPAD LLKVADALR RG Sbjct: 68 DNNTTGKFLNQRFTLIDRRVKDDEDAAQAANELAGKTGFILADLPADTLLKVADALRGRG 127 Query: 121 TVLLNAGAIDDRLREQDCRANVIHIAPTRSMLADALGQYLVWKQWKRWLLVVGSHDQDKL 180 T LLN G+ DDRLREQDCRANV+H+APTRSMLAD L QYLVWKQWKRWLLV GSHD DKL Sbjct: 128 TTLLNVGSTDDRLREQDCRANVLHVAPTRSMLADGLAQYLVWKQWKRWLLVTGSHDNDKL 187 Query: 181 YADALRRAATRFGAKIVQERTFEDTGGARRTDSGVTLIQRQMPVFTQQAPAYDVLVAADE 240 +ADALRRAATRFGAKIV+ER+FEDTGGARRTDSGVTLIQRQMPVFTQ+APAYDVLVAADE Sbjct: 188 FADALRRAATRFGAKIVEERSFEDTGGARRTDSGVTLIQRQMPVFTQKAPAYDVLVAADE 247 Query: 241 SEVFANYLPYRTWDPRPVAGSAGLVPTSWDAAHDQWGAVQIQNRFVKLNMRRMTALDMQA 300 SEVFANYLPYRTWDPRPVAGSAGL PTSWD A DQWGA Q+QNRF+KL RRM ALDMQA Sbjct: 248 SEVFANYLPYRTWDPRPVAGSAGLRPTSWDPAQDQWGATQLQNRFMKLASRRMDALDMQA 307 Query: 301 WTAARMIGEATSRTNSGDPKKVIAFLKGKDFSIAAFKGTRLTLRDWNLQLRQPILLADGR 360 W A RM+GEA SRTNSGD K + +LKG +F+IAAFKGTRL+LRDWNLQLRQPILLADGR Sbjct: 308 WMAVRMVGEAASRTNSGDAKAMADYLKGPNFTIAAFKGTRLSLRDWNLQLRQPILLADGR 367 Query: 361 MVVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 393 M+VSVSPQEGFLHQVSELDTLGVDRPETKCKLQ Sbjct: 368 MIVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 400 >ref|YP_001207355.1| hypothetical protein BRADO5462 [Bradyrhizobium sp. ORS 278] emb|CAL79138.1| conserved hypothetical protein; putative exported protein [Bradyrhizobium sp. ORS 278] Length = 402 Score = 613 bits (1581), Expect = e-173, Method: Compositional matrix adjust. Identities = 312/393 (79%), Positives = 340/393 (86%) Query: 1 MLRWLIGTIALSMVATGALAADPVEVHIGYLGHAGVKSTLSLVEQPADNDGIAGARLAIE 60 + R LIG I L AT A AADPV++ IGYLG AGV TLS ++QPA +DG+AGARLAIE Sbjct: 10 LARSLIGAIGLMAAATAADAADPVDIAIGYLGRAGVPQTLSPLDQPAADDGVAGARLAIE 69 Query: 61 DNNTTGKFLNQRFVLDEVKVKDSDDVAKVATDFAGRNDYIITDLPADALLKVADALRDRG 120 DNNTTGKFLNQRF L + KVKD +D A+ A + A + +I+ DLPADALLKVAD+LR RG Sbjct: 70 DNNTTGKFLNQRFTLIDRKVKDDEDAAQAANELAAKTAFILADLPADALLKVADSLRGRG 129 Query: 121 TVLLNAGAIDDRLREQDCRANVIHIAPTRSMLADALGQYLVWKQWKRWLLVVGSHDQDKL 180 LLN GA DDRLREQDCRANVIH+APTRSMLAD L QYLVWKQWKRWLLV GSHD DKL Sbjct: 130 VALLNVGATDDRLREQDCRANVIHVAPTRSMLADGLAQYLVWKQWKRWLLVTGSHDNDKL 189 Query: 181 YADALRRAATRFGAKIVQERTFEDTGGARRTDSGVTLIQRQMPVFTQQAPAYDVLVAADE 240 +ADALRRAATRFGAKIV+ERTFEDTGGARRTDSGVTLIQRQMPVFTQ+APAYDVLVAADE Sbjct: 190 FADALRRAATRFGAKIVEERTFEDTGGARRTDSGVTLIQRQMPVFTQKAPAYDVLVAADE 249 Query: 241 SEVFANYLPYRTWDPRPVAGSAGLVPTSWDAAHDQWGAVQIQNRFVKLNMRRMTALDMQA 300 SEVFA+YLPYRTWDPRPVAGSAGL PTSWD A DQWGA Q+QNRF+KL RRM ALDMQA Sbjct: 250 SEVFADYLPYRTWDPRPVAGSAGLRPTSWDPAQDQWGATQLQNRFMKLASRRMDALDMQA 309 Query: 301 WTAARMIGEATSRTNSGDPKKVIAFLKGKDFSIAAFKGTRLTLRDWNLQLRQPILLADGR 360 W A RM+GEA SRTNSGD K + +LK F+IAAFKGTRL+LRDWNLQLRQPILLADGR Sbjct: 310 WMAVRMVGEAASRTNSGDAKAMTDYLKSPAFTIAAFKGTRLSLRDWNLQLRQPILLADGR 369 Query: 361 MVVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 393 M+VSVSPQEGFLHQVSELDTLGVDRPETKCKLQ Sbjct: 370 MIVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 402 >emb|CAJ01643.1| conserved hypothetical protein, similar to blr6188 of Bradyrhizobium japonicum [Methylocapsa acidiphila] Length = 408 Score = 503 bits (1294), Expect = e-140, Method: Compositional matrix adjust. Identities = 246/395 (62%), Positives = 303/395 (76%), Gaps = 3/395 (0%) Query: 2 LRWLIGTIALSMVA--TGALAADPVEVHIGYLGHAGVKSTLSLVEQPADNDGIAGARLAI 59 L +L +AL A A A D VEV +G++ V+ T+S+++ PA++D IAGARLA+ Sbjct: 14 LVFLASLLALGQTAGLVAARADDAVEVKVGFIRAPHVRETISILDIPAEDDAIAGARLAV 73 Query: 60 EDNNTTGKFLNQRFVLDEVKVKDSDD-VAKVATDFAGRNDYIITDLPADALLKVADALRD 118 EDNNTTG+FL Q F +++ +K DD +A + + ++ DLPA +L +ADA + Sbjct: 74 EDNNTTGRFLGQSFSIEDRLLKAGDDPLAAMNSLVEHGVSLLLVDLPAAQILALADAAKS 133 Query: 119 RGTVLLNAGAIDDRLREQDCRANVIHIAPTRSMLADALGQYLVWKQWKRWLLVVGSHDQD 178 R +L N GA +D LRE++CRA+VIH+AP+ SMLAD L QYLVWKQWKRWLL+ GSH +D Sbjct: 134 RNILLFNVGAPNDSLREENCRADVIHVAPSHSMLADGLAQYLVWKQWKRWLLMKGSHSED 193 Query: 179 KLYADALRRAATRFGAKIVQERTFEDTGGARRTDSGVTLIQRQMPVFTQQAPAYDVLVAA 238 +L+ADALRR+A +FGAKIV+ER +EDTGG RR+DSG QR +PV TQ APAYDVLVAA Sbjct: 194 QLFADALRRSARKFGAKIVEERVYEDTGGGRRSDSGSVQTQRLVPVATQSAPAYDVLVAA 253 Query: 239 DESEVFANYLPYRTWDPRPVAGSAGLVPTSWDAAHDQWGAVQIQNRFVKLNMRRMTALDM 298 DESEVFA YLPYRT+DPRPVAGSAGL P SWD H+QWGA+Q+QNRF+KL RRM A D Sbjct: 254 DESEVFAEYLPYRTFDPRPVAGSAGLKPLSWDPTHEQWGAIQLQNRFMKLAARRMNARDN 313 Query: 299 QAWTAARMIGEATSRTNSGDPKKVIAFLKGKDFSIAAFKGTRLTLRDWNLQLRQPILLAD 358 QAW A RMIGEA +RT S DPK + +L G +FSIAAFKG + TLR WNLQLRQPILL D Sbjct: 314 QAWVAMRMIGEAATRTGSSDPKLLREYLIGPEFSIAAFKGQKQTLRPWNLQLRQPILLGD 373 Query: 359 GRMVVSVSPQEGFLHQVSELDTLGVDRPETKCKLQ 393 GRM+VSVSPQEG+LHQ SELDTLG+D+PETKCKLQ Sbjct: 374 GRMIVSVSPQEGYLHQNSELDTLGLDQPETKCKLQ 408