BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0017.p (322 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772829.1| hypothetical protein blr6189 [Bradyrhizobium ja... 551 e-155 ref|YP_001241791.1| hypothetical protein BBta_5946 [Bradyrhizobi... 546 e-153 ref|YP_001207356.1| putative quinoprotein amine dehydrogenase su... 535 e-150 ref|YP_783583.1| YVTN beta-propeller repeat-containing protein [... 533 e-149 ref|ZP_06888897.1| 40-residue YVTN family beta-propeller repeat ... 449 e-124 >ref|NP_772829.1| hypothetical protein blr6189 [Bradyrhizobium japonicum USDA 110] dbj|BAC51454.1| blr6189 [Bradyrhizobium japonicum USDA 110] Length = 330 Score = 551 bits (1420), Expect = e-155, Method: Compositional matrix adjust. Identities = 270/320 (84%), Positives = 289/320 (90%), Gaps = 2/320 (0%) Query: 1 MWRRCLLTGMLVWLAATPASAFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFS 60 MWR LL+G+ L PA A++AYVSNEK NTV+VIDT SWTVTKTIKVGQRPRGI+F+ Sbjct: 12 MWRVGLLSGLA--LMTAPAHAYIAYVSNEKSNTVSVIDTDSWTVTKTIKVGQRPRGIDFT 69 Query: 61 RDGKFVMVAVGDDDTIQVIDTKTQEIVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTV 120 RDGKFVMVAVGDDDTIQVID KTQ +VD+LPSGPDPELF QDAAGK +YVANENDNTVTV Sbjct: 70 RDGKFVMVAVGDDDTIQVIDAKTQSVVDSLPSGPDPELFAQDAAGKILYVANENDNTVTV 129 Query: 121 IDLEKRARIGDIQVGVEPEGMTISPDGKILINTSETTNMAHFIDTSTRQIVANVLVDSRP 180 IDLEKRAR+GDIQVGVEPEGMTISPDGK LINTSETTNMAHFIDT++RQIVANVLVD+RP Sbjct: 130 IDLEKRARLGDIQVGVEPEGMTISPDGKTLINTSETTNMAHFIDTASRQIVANVLVDARP 189 Query: 181 RFAQFKRDGSELWVSSEIGGTVSIIDPVKREVTGKITFEIPGLRNEAIQPVGIGMTKDGK 240 RFA+FK D SELWVSSEIGGTVSIIDP K EV GK+TFEIPGLR EAIQPVGI MT+D K Sbjct: 190 RFAEFKHDASELWVSSEIGGTVSIIDPGKHEVIGKVTFEIPGLRKEAIQPVGIDMTRDDK 249 Query: 241 TAFIALGPANRVAVVDGVTHKVLKYLLVGQRVWHMDFTPDEKYLLVTNGVSNDVSVIDVA 300 TAF+ALGPANR+AVVD T KV KYLLVGQRVWHM FTPDEKYLL TNGVSNDVSVIDVA Sbjct: 250 TAFVALGPANRIAVVDVATRKVTKYLLVGQRVWHMAFTPDEKYLLTTNGVSNDVSVIDVA 309 Query: 301 AQKVIKTIQVGELPWGITIA 320 AQKVIKTIQVGELPWGI IA Sbjct: 310 AQKVIKTIQVGELPWGIAIA 329 >ref|YP_001241791.1| hypothetical protein BBta_5946 [Bradyrhizobium sp. BTAi1] gb|ABQ37885.1| hypothetical protein BBta_5946 [Bradyrhizobium sp. BTAi1] Length = 335 Score = 546 bits (1406), Expect = e-153, Method: Compositional matrix adjust. Identities = 263/302 (87%), Positives = 285/302 (94%) Query: 21 AFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFSRDGKFVMVAVGDDDTIQVID 80 A+VA+VSNEKGNTV+VIDT +WTVTKTIKVGQRPRGI F+RDGKFVMVAVGDDDTIQVID Sbjct: 34 AYVAFVSNEKGNTVSVIDTDTWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQVID 93 Query: 81 TKTQEIVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTVIDLEKRARIGDIQVGVEPEG 140 K E+VDTLPSGPDPELF QDAAGKT+YVANENDNTVTV+DLEKR RIGD+QVGVEPEG Sbjct: 94 AKKMEVVDTLPSGPDPELFAQDAAGKTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEG 153 Query: 141 MTISPDGKILINTSETTNMAHFIDTSTRQIVANVLVDSRPRFAQFKRDGSELWVSSEIGG 200 M +SPDGKILI TSETTNMAHFIDT+TR+IVANVLVD+RPR+A+FK DGSELWVS+EIGG Sbjct: 154 MMLSPDGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEFKTDGSELWVSAEIGG 213 Query: 201 TVSIIDPVKREVTGKITFEIPGLRNEAIQPVGIGMTKDGKTAFIALGPANRVAVVDGVTH 260 TVSIIDP KREVTGKI F +PGLR+EAIQPVGI +TKDGKT F+ALGPANRVAVVDG TH Sbjct: 214 TVSIIDPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGATH 273 Query: 261 KVLKYLLVGQRVWHMDFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIA 320 +V KYLLVGQRVWHM+FTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIA Sbjct: 274 EVKKYLLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIA 333 Query: 321 QP 322 QP Sbjct: 334 QP 335 >ref|YP_001207356.1| putative quinoprotein amine dehydrogenase subunit beta-like [Bradyrhizobium sp. ORS 278] emb|CAL79139.1| conserved hypothetical protein; putative quinoprotein amine dehydrogenase, beta chain-like [Bradyrhizobium sp. ORS 278] Length = 297 Score = 535 bits (1379), Expect = e-150, Method: Compositional matrix adjust. Identities = 259/297 (87%), Positives = 279/297 (93%) Query: 26 VSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFSRDGKFVMVAVGDDDTIQVIDTKTQE 85 +SNEKGNTV+VIDT SWTVTKTIKVGQRPRGI F+RDGKFVMVAVGDDDTIQ+ID K E Sbjct: 1 MSNEKGNTVSVIDTDSWTVTKTIKVGQRPRGIAFTRDGKFVMVAVGDDDTIQLIDAKKME 60 Query: 86 IVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTVIDLEKRARIGDIQVGVEPEGMTISP 145 IVDTLPSGPDPELF QD AGKT+YVANENDNTVTV+DLEKR RIGD+QVGVEPEGM +SP Sbjct: 61 IVDTLPSGPDPELFAQDTAGKTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSP 120 Query: 146 DGKILINTSETTNMAHFIDTSTRQIVANVLVDSRPRFAQFKRDGSELWVSSEIGGTVSII 205 DGKILI TSETTNMAHFIDT+TR+IVANVLVD+RPR+A+FK DGSELWVS+EIGGTVSII Sbjct: 121 DGKILICTSETTNMAHFIDTATRKIVANVLVDARPRYAEFKTDGSELWVSAEIGGTVSII 180 Query: 206 DPVKREVTGKITFEIPGLRNEAIQPVGIGMTKDGKTAFIALGPANRVAVVDGVTHKVLKY 265 DP KREVTGKI F +PGLR+EAIQPVGI +TKDGKT F+ALGPANRVAVVDG TH+V KY Sbjct: 181 DPAKREVTGKIKFAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKY 240 Query: 266 LLVGQRVWHMDFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP 322 LLVGQRVWHM+FTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP Sbjct: 241 LLVGQRVWHMEFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELPWGITIAQP 297 Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 62/217 (28%), Positives = 98/217 (45%), Gaps = 9/217 (4%) Query: 14 LAATPASAFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFSRDGKFVMVAVGDD 73 L A + YV+NE NTVTV+D ++VG P G+ S DGK ++ Sbjct: 73 LFAQDTAGKTLYVANENDNTVTVLDLEKRVRIGDVQVGVEPEGMMLSPDGKILICTSETT 132 Query: 74 DTIQVIDTKTQEIVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTVIDLEKRARIGDIQ 133 + IDT T++IV + P G ++V+ E TV++ID KR G I+ Sbjct: 133 NMAHFIDTATRKIVANVLVDARPRYAEFKTDGSELWVSAEIGGTVSIIDPAKREVTGKIK 192 Query: 134 VGV--------EPEGMTISPDGKILINTSETTNMAHFIDTSTRQIVANVLVDSRPRFAQF 185 V +P G++++ DGK N +D +T ++ +LV R +F Sbjct: 193 FAVPGLRSEAIQPVGISLTKDGKTGFVALGPANRVAVVDGTTHEVKKYLLVGQRVWHMEF 252 Query: 186 KRDGSELWVSSEIGGTVSIIDPVKREVTGKITF-EIP 221 D L V++ + VS+ID ++V I E+P Sbjct: 253 TPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGELP 289 >ref|YP_783583.1| YVTN beta-propeller repeat-containing protein [Rhodopseudomonas palustris BisA53] gb|ABJ08603.1| 40-residue YVTN family beta-propeller repeat protein [Rhodopseudomonas palustris BisA53] Length = 322 Score = 533 bits (1374), Expect = e-149, Method: Compositional matrix adjust. Identities = 254/309 (82%), Positives = 283/309 (91%) Query: 14 LAATPASAFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFSRDGKFVMVAVGDD 73 AATPA AF+AYVSNEK NTV+VIDT++W+VT TIKVGQRPRGIEFS+DGKFV+VAVGDD Sbjct: 14 FAATPAVAFIAYVSNEKSNTVSVIDTATWSVTATIKVGQRPRGIEFSKDGKFVLVAVGDD 73 Query: 74 DTIQVIDTKTQEIVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTVIDLEKRARIGDIQ 133 DTI+VIDT T+E+VD LPSGPDPELF QDAAGK +YVANENDNTVT+IDL +RAR+G++Q Sbjct: 74 DTIEVIDTATREVVDKLPSGPDPELFVQDAAGKLLYVANENDNTVTIIDLARRARLGEVQ 133 Query: 134 VGVEPEGMTISPDGKILINTSETTNMAHFIDTSTRQIVANVLVDSRPRFAQFKRDGSELW 193 VGVEPEGM +SPDG ILINTSETTNMAHFIDTSTR+IVAN+LVDSRPRFA+FKRD SELW Sbjct: 134 VGVEPEGMALSPDGSILINTSETTNMAHFIDTSTRKIVANILVDSRPRFAEFKRDNSELW 193 Query: 194 VSSEIGGTVSIIDPVKREVTGKITFEIPGLRNEAIQPVGIGMTKDGKTAFIALGPANRVA 253 VS+EIGGTV++IDPVKREV KI F IPGLR EAIQPVGIG+T DG T F+ALGPANRVA Sbjct: 194 VSAEIGGTVTVIDPVKREVKTKINFAIPGLRREAIQPVGIGITSDGNTGFVALGPANRVA 253 Query: 254 VVDGVTHKVLKYLLVGQRVWHMDFTPDEKYLLVTNGVSNDVSVIDVAAQKVIKTIQVGEL 313 V+D TH+V KYLLVGQRVWHM FTPDEK+LLVTNGVSNDVSVIDVAA KVIKTIQVGEL Sbjct: 254 VIDATTHQVTKYLLVGQRVWHMAFTPDEKHLLVTNGVSNDVSVIDVAALKVIKTIQVGEL 313 Query: 314 PWGITIAQP 322 PWGIT+A P Sbjct: 314 PWGITMAPP 322 Score = 38.1 bits (87), Expect = 2.1, Method: Compositional matrix adjust. Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 2/58 (3%) Query: 4 RCLLTGMLVW-LAATPASAFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFS 60 + LL G VW +A TP + V+N N V+VID ++ V KTI+VG+ P GI + Sbjct: 264 KYLLVGQRVWHMAFTPDEKHL-LVTNGVSNDVSVIDVAALKVIKTIQVGELPWGITMA 320 >ref|ZP_06888897.1| 40-residue YVTN family beta-propeller repeat protein [Methylosinus trichosporium OB3b] gb|EFH02621.1| 40-residue YVTN family beta-propeller repeat protein [Methylosinus trichosporium OB3b] Length = 373 Score = 449 bits (1155), Expect = e-124, Method: Compositional matrix adjust. Identities = 212/317 (66%), Positives = 254/317 (80%) Query: 4 RCLLTGMLVWLAATPASAFVAYVSNEKGNTVTVIDTSSWTVTKTIKVGQRPRGIEFSRDG 63 R L+ + L A+PA AF+AYV+NEKGN+VTVIDT T KT+KVG+RPRG+E S+DG Sbjct: 55 RALVLCCALALVASPAHAFLAYVTNEKGNSVTVIDTDKLTAVKTVKVGRRPRGVEISKDG 114 Query: 64 KFVMVAVGDDDTIQVIDTKTQEIVDTLPSGPDPELFTQDAAGKTMYVANENDNTVTVIDL 123 + V GDDDTIQVIDTKT ++ LPSGPDPEL GKT+YV+NENDN VT+ID Sbjct: 115 AELYVCAGDDDTIQVIDTKTLQVSGNLPSGPDPELMILSPDGKTVYVSNENDNLVTLIDT 174 Query: 124 EKRARIGDIQVGVEPEGMTISPDGKILINTSETTNMAHFIDTSTRQIVANVLVDSRPRFA 183 + + R+GD+ VGVEPEGM +SPDG++++NTSETTNMAH IDT T++I+ANVLVD+RPRFA Sbjct: 175 QTKKRVGDVPVGVEPEGMAVSPDGRVIVNTSETTNMAHLIDTQTKEIIANVLVDARPRFA 234 Query: 184 QFKRDGSELWVSSEIGGTVSIIDPVKREVTGKITFEIPGLRNEAIQPVGIGMTKDGKTAF 243 FK DGSELWVSSEIGGTVS+IDP +VT KI FEIPGL EAIQP+GI + DGK A+ Sbjct: 235 AFKPDGSELWVSSEIGGTVSVIDPASHKVTDKIRFEIPGLSKEAIQPIGISFSGDGKRAY 294 Query: 244 IALGPANRVAVVDGVTHKVLKYLLVGQRVWHMDFTPDEKYLLVTNGVSNDVSVIDVAAQK 303 +ALGPANRVAV+D T K+ KYLLVGQRVWH+ FTPDEKYLL NGVSNDVSVID A+ K Sbjct: 295 VALGPANRVAVIDVATKKIEKYLLVGQRVWHLAFTPDEKYLLTANGVSNDVSVIDTASLK 354 Query: 304 VIKTIQVGELPWGITIA 320 V+K+I VG PWGI +A Sbjct: 355 VVKSIPVGAFPWGIAVA 371 Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust. Identities = 49/131 (37%), Positives = 65/131 (49%), Gaps = 12/131 (9%) Query: 25 YVSNEKGNTVTVIDTSSWTVTKTI--------KVGQRPRGIEFSRDGKFVMVAVGDDDTI 76 +VS+E G TV+VID +S VT I K +P GI FS DGK VA+G + + Sbjct: 244 WVSSEIGGTVSVIDPASHKVTDKIRFEIPGLSKEAIQPIGISFSGDGKRAYVALGPANRV 303 Query: 77 QVIDTKTQEIVDTLPSGPD--PELFTQDAAGKTMYVANENDNTVTVIDLEKRARIGDIQV 134 VID T++I L G FT D K + AN N V+VID + I V Sbjct: 304 AVIDVATKKIEKYLLVGQRVWHLAFTPDE--KYLLTANGVSNDVSVIDTASLKVVKSIPV 361 Query: 135 GVEPEGMTISP 145 G P G+ ++P Sbjct: 362 GAFPWGIAVAP 372