BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0008.p (274 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772837.1| hypothetical protein blr6197 [Bradyrhizobium ja... 455 e-126 ref|YP_001241798.1| hypothetical protein BBta_5953 [Bradyrhizobi... 408 e-112 ref|YP_001207363.1| putative signal peptide [Bradyrhizobium sp. ... 402 e-110 ref|YP_779785.1| hypothetical protein RPE_0849 [Rhodopseudomonas... 362 3e-98 gb|ABD57891.1| predicted secreted protein [uncultured Methylocys... 283 2e-74 >ref|NP_772837.1| hypothetical protein blr6197 [Bradyrhizobium japonicum USDA 110] dbj|BAC51462.1| blr6197 [Bradyrhizobium japonicum USDA 110] Length = 274 Score = 455 bits (1171), Expect = e-126, Method: Compositional matrix adjust. Identities = 220/274 (80%), Positives = 239/274 (87%), Gaps = 2/274 (0%) Query: 1 MTGHRARLLCIASLLTIALGTPAAPAAEAYDPWPGLVQDIFSNRPMNDGNDVIGIEMPMR 60 MTG RL IA LL +A P A E YDPWPGLVQDIFSNRPMNDG +VIGIEMP R Sbjct: 3 MTGCIRRLPLIALLLGVAFAAPTQ-AEETYDPWPGLVQDIFSNRPMNDGANVIGIEMPYR 61 Query: 61 AEDAAIVPVTLRTKLQPSDSRRVVAITLVIDENPAPMAAKFTLGPAANVTEISTRVRVNN 120 AEDAAIVPVTLR+KL P D+RR+ +ITLVID NPAPMAAKF LGP ANV+EISTRVRVNN Sbjct: 62 AEDAAIVPVTLRSKLSPGDARRIRSITLVIDRNPAPMAAKFELGPDANVSEISTRVRVNN 121 Query: 121 YTNVHAVAELSDGKLYVSKIYVKASGGCSAPAGKNVEEAKNRLGQMRYRQFTKSEQGPAT 180 YT+VHAVAELSDG+LYVSK YVKASGGCSAPAGKNVEEAKNRLGQMRYRQF + E PA+ Sbjct: 122 YTDVHAVAELSDGQLYVSKTYVKASGGCSAPAGKNVEEAKNRLGQMRYRQFAR-EDAPAS 180 Query: 181 STREAQIMIGHPNNSGLQMDQVTQLYIPAFFVNELHIWQDDSPVLAMEGGISISEDPNIR 240 REAQIMIGHPNNSGLQMDQVTQLYIPAFF+N+L + QDDSPVL+MEGGISISEDPN+R Sbjct: 181 RVREAQIMIGHPNNSGLQMDQVTQLYIPAFFINQLKLTQDDSPVLSMEGGISISEDPNLR 240 Query: 241 FTYVSNGAKRFRAEAKDTEGHIFEHEWKVENPGT 274 FTYVSNGAKRFRAEAKDT+GH+F +EW VE PGT Sbjct: 241 FTYVSNGAKRFRAEAKDTDGHVFRNEWDVEKPGT 274 >ref|YP_001241798.1| hypothetical protein BBta_5953 [Bradyrhizobium sp. BTAi1] gb|ABQ37892.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 278 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 192/265 (72%), Positives = 224/265 (84%), Gaps = 2/265 (0%) Query: 12 ASLLTIALGTPAAPA--AEAYDPWPGLVQDIFSNRPMNDGNDVIGIEMPMRAEDAAIVPV 69 A LL +L APA AE YDPWPGLVQD+F+N+PM DG +V+ IEMP RAEDA++VPV Sbjct: 14 AGLLGASLAFCFAPAKAAEGYDPWPGLVQDVFNNKPMQDGANVLSIEMPARAEDASVVPV 73 Query: 70 TLRTKLQPSDSRRVVAITLVIDENPAPMAAKFTLGPAANVTEISTRVRVNNYTNVHAVAE 129 TLR+KL P+D RR+ ITLVID+NPAPMAAKFTLG ANVT ISTRVRVNNYT+VHAVAE Sbjct: 74 TLRSKLSPADERRIKTITLVIDQNPAPMAAKFTLGADANVTAISTRVRVNNYTDVHAVAE 133 Query: 130 LSDGKLYVSKIYVKASGGCSAPAGKNVEEAKNRLGQMRYRQFTKSEQGPATSTREAQIMI 189 L+DG+LYV K +VKASGGCSAPA KN +EAK R+GQMRYRQFT++ G + REAQ+M+ Sbjct: 134 LTDGQLYVIKTFVKASGGCSAPAAKNPDEAKARIGQMRYRQFTQAGDGATSGIREAQVMV 193 Query: 190 GHPNNSGLQMDQVTQLYIPAFFVNELHIWQDDSPVLAMEGGISISEDPNIRFTYVSNGAK 249 GHPNNSGLQMDQ+TQLYIPAFFV++L + QD S VL++EGGISISEDPNIRFTYVSNGAK Sbjct: 194 GHPNNSGLQMDQLTQLYIPAFFVDQLTLSQDGSLVLSVEGGISISEDPNIRFTYVSNGAK 253 Query: 250 RFRAEAKDTEGHIFEHEWKVENPGT 274 FRAEA+DT+GH+FEHEW E GT Sbjct: 254 HFRAEARDTQGHVFEHEWPAEGSGT 278 >ref|YP_001207363.1| putative signal peptide [Bradyrhizobium sp. ORS 278] emb|CAL79146.1| conserved hypothetical protein; putative signal peptide [Bradyrhizobium sp. ORS 278] Length = 273 Score = 402 bits (1033), Expect = e-110, Method: Compositional matrix adjust. Identities = 185/247 (74%), Positives = 214/247 (86%) Query: 28 EAYDPWPGLVQDIFSNRPMNDGNDVIGIEMPMRAEDAAIVPVTLRTKLQPSDSRRVVAIT 87 E YDPWPGLVQDIF+N+PM DG +V+ IEMP RAEDA++VPVTLR+KL P+D RR+ IT Sbjct: 27 EGYDPWPGLVQDIFNNKPMQDGGNVLSIEMPTRAEDASVVPVTLRSKLSPADDRRIKTIT 86 Query: 88 LVIDENPAPMAAKFTLGPAANVTEISTRVRVNNYTNVHAVAELSDGKLYVSKIYVKASGG 147 LVID+NPAPMAA+FTLG ANVT ISTRVRVNNYT+VHAVAEL+DG+LYV K +VKASGG Sbjct: 87 LVIDQNPAPMAARFTLGQDANVTAISTRVRVNNYTDVHAVAELTDGQLYVVKTFVKASGG 146 Query: 148 CSAPAGKNVEEAKNRLGQMRYRQFTKSEQGPATSTREAQIMIGHPNNSGLQMDQVTQLYI 207 CSAPA KN +EAK R+GQMRYRQFT+ G ++ REAQ+M+GHPNNSGLQMDQVTQLYI Sbjct: 147 CSAPAAKNPDEAKARIGQMRYRQFTQGGDGASSGIREAQVMVGHPNNSGLQMDQVTQLYI 206 Query: 208 PAFFVNELHIWQDDSPVLAMEGGISISEDPNIRFTYVSNGAKRFRAEAKDTEGHIFEHEW 267 PAFFV+ L + QD S VL++EGGISISEDPNIRFTYVSNGAK FRAEA+DT+GH+FEHEW Sbjct: 207 PAFFVDRLTLSQDGSLVLSVEGGISISEDPNIRFTYVSNGAKHFRAEARDTQGHVFEHEW 266 Query: 268 KVENPGT 274 E GT Sbjct: 267 PAEGSGT 273 >ref|YP_779785.1| hypothetical protein RPE_0849 [Rhodopseudomonas palustris BisA53] gb|ABJ04805.1| conserved hypothetical protein [Rhodopseudomonas palustris BisA53] Length = 276 Score = 362 bits (929), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 169/235 (71%), Positives = 198/235 (84%) Query: 36 LVQDIFSNRPMNDGNDVIGIEMPMRAEDAAIVPVTLRTKLQPSDSRRVVAITLVIDENPA 95 L QDIF +P+ DG+ +I IEMP RAEDAAIVPVTLR L PSD+R+V A+TLVID+NPA Sbjct: 38 LAQDIFKGQPIQDGSGLIAIEMPYRAEDAAIVPVTLRMTLPPSDTRQVKAVTLVIDQNPA 97 Query: 96 PMAAKFTLGPAANVTEISTRVRVNNYTNVHAVAELSDGKLYVSKIYVKASGGCSAPAGKN 155 PMAA+F LG A VTEISTRVRVN YT+VHAVAELSDG LY+ K YVKASGGCSAPA KN Sbjct: 98 PMAARFELGRDAAVTEISTRVRVNFYTDVHAVAELSDGHLYMVKTYVKASGGCSAPAAKN 157 Query: 156 VEEAKNRLGQMRYRQFTKSEQGPATSTREAQIMIGHPNNSGLQMDQVTQLYIPAFFVNEL 215 EEAKN LGQ+R+RQF +E GP +R AQ+MIGHPNNSGLQMDQVTQLY+P FFVN+L Sbjct: 158 AEEAKNNLGQIRFRQFAPTEDGPTNGSRSAQVMIGHPNNSGLQMDQVTQLYVPPFFVNDL 217 Query: 216 HIWQDDSPVLAMEGGISISEDPNIRFTYVSNGAKRFRAEAKDTEGHIFEHEWKVE 270 I QDD+P+L+M+GGISISE+PNIRF+YV NGAK R EAKDT+GH+F+ EWK++ Sbjct: 218 RILQDDAPLLSMQGGISISENPNIRFSYVPNGAKTIRVEAKDTDGHLFQGEWKLD 272 >gb|ABD57891.1| predicted secreted protein [uncultured Methylocystis sp. GSC357] Length = 268 Score = 283 bits (724), Expect = 2e-74, Method: Compositional matrix adjust. Identities = 147/265 (55%), Positives = 187/265 (70%), Gaps = 13/265 (4%) Query: 6 ARLLCIASLLTIALGTPAAPAAEAYDPWPGLVQDIFSNRPM-NDGNDVIGIEMPMRAEDA 64 A LLC+ +L AL A A DPWP L +D+F R + NDG+ V+ E P+RAEDA Sbjct: 12 AGLLCVVLMLG-ALDGALAQAPAPVDPWPDLARDLFQGRAIVNDGSVVL--EAPVRAEDA 68 Query: 65 AIVPVTLRTKLQPSDSRRVVAITLVIDENPAPMAAKFTLGPAANVTEISTRVRVNNYTNV 124 AIVP+TLR L+ + RR TLV+D+NP PMAA FT G A VT ISTRVRVN+YTNV Sbjct: 69 AIVPMTLR--LKAAGLRRA---TLVVDQNPMPMAAAFTFGETAGVTFISTRVRVNSYTNV 123 Query: 125 HAVAELSDGKLYVSKIYVKASGGCSAPAGKNVEEAKNRLGQMRYRQFTKSEQGPATSTRE 184 HAV E DG L+ +VKA+GGCSAPA KN++EA + LGQM+YR+F E G RE Sbjct: 124 HAVGETGDGALHAQVKFVKAAGGCSAPAVKNMDEAASHLGQMKYREFKSGESG----HRE 179 Query: 185 AQIMIGHPNNSGLQMDQVTQLYIPAFFVNELHIWQDDSPVLAMEGGISISEDPNIRFTYV 244 AQIMI HPNNSG+QMDQ+T LYIPA +++++ + Q D+ + +MEGGIS+SEDPN RF+Y Sbjct: 180 AQIMIRHPNNSGMQMDQLTHLYIPAHYIDKVVVRQGDTLIFSMEGGISLSEDPNFRFSYA 239 Query: 245 SNGAKRFRAEAKDTEGHIFEHEWKV 269 NGAK EA DT+G++F+ EW + Sbjct: 240 PNGAKTISVEAHDTKGNVFKQEWPI 264