BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0161.0005.p (164 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772839.1| ABC transporter substrate-binding protein [Brad... 253 5e-66 ref|YP_001207365.1| putative ABC transporter substrate-binding p... 246 7e-64 ref|YP_001241800.1| putative ABC transporter substrate-binding p... 242 1e-62 ref|YP_002360358.1| ABC transporter substrate-binding protein [M... 168 2e-40 ref|ZP_08072203.1| ABC transporter substrate-binding protein [Me... 167 6e-40 >ref|NP_772839.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC51464.1| ABC transporter substrate-binding protein [Bradyrhizobium japonicum USDA 110] Length = 327 Score = 253 bits (647), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 118/162 (72%), Positives = 138/162 (85%) Query: 3 PPLLAAKTLGGEMDATLNYWNFCAALEAKGFRRLAGMEEILQKLGSKGRIAMIGYVFDEA 62 PPL+AAK L GEMDA+LN+WNFCA LEAKGFRRLAG+E+IL KLG+KG ++ +GYVFDE Sbjct: 166 PPLIAAKALDGEMDASLNFWNFCAQLEAKGFRRLAGIEDILPKLGAKGAVSAVGYVFDEG 225 Query: 63 WANANKDLVARFIAVTRAAKEILATSDAEWDTIAPLTGAQDAATLHAYRERYREGIPRRP 122 WA +++D VARFIA+TR AK++L TSDA W+ IAPLTG DA L YR+RYR+GIPRR Sbjct: 226 WAASHRDAVARFIAMTRKAKQLLVTSDAAWEKIAPLTGTSDAVMLKTYRDRYRDGIPRRS 285 Query: 123 IADEEADARVLYRVLAQLGGRDLVGTATELDPGTFYQAIPGD 164 IADEEADARVLYRVLA+ GGRDLVG A ELDPGTFY A+PGD Sbjct: 286 IADEEADARVLYRVLAETGGRDLVGPAAELDPGTFYHAVPGD 327 >ref|YP_001207365.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. ORS 278] emb|CAL79148.1| putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. ORS 278] Length = 326 Score = 246 bits (628), Expect = 7e-64, Method: Compositional matrix adjust. Identities = 119/158 (75%), Positives = 136/158 (86%) Query: 3 PPLLAAKTLGGEMDATLNYWNFCAALEAKGFRRLAGMEEILQKLGSKGRIAMIGYVFDEA 62 PPLLAAK GEMDA LNYWNFCAALEAKGFRRLAG+E+IL G+KGR A+IGYVFDE Sbjct: 165 PPLLAAKLADGEMDAGLNYWNFCAALEAKGFRRLAGIEDILPAFGAKGRTAVIGYVFDEE 224 Query: 63 WANANKDLVARFIAVTRAAKEILATSDAEWDTIAPLTGAQDAATLHAYRERYREGIPRRP 122 WA+ ++DLV RF++VT AKEILATSDA+W TIAPLTGAQD ATL AYR+RYREGIPRR Sbjct: 225 WASKHRDLVNRFLSVTSKAKEILATSDADWQTIAPLTGAQDDATLRAYRDRYREGIPRRS 284 Query: 123 IADEEADARVLYRVLAQLGGRDLVGTATELDPGTFYQA 160 +A+EEADAR+LY VLA +GGRDLVG A EL PGT+Y+A Sbjct: 285 VAEEEADARILYGVLASIGGRDLVGPAAELSPGTYYRA 322 >ref|YP_001241800.1| putative ABC transporter substrate-binding protein [Bradyrhizobium sp. BTAi1] gb|ABQ37894.1| putative ABC transporter (substrate-binding protein) [Bradyrhizobium sp. BTAi1] Length = 331 Score = 242 bits (618), Expect = 1e-62, Method: Compositional matrix adjust. Identities = 117/158 (74%), Positives = 133/158 (84%) Query: 3 PPLLAAKTLGGEMDATLNYWNFCAALEAKGFRRLAGMEEILQKLGSKGRIAMIGYVFDEA 62 PPLLAAK GEMDA LNYWNFCAALEAKGFRRL G+E++L G+KGR AMIGYVFDE Sbjct: 170 PPLLAAKLADGEMDAGLNYWNFCAALEAKGFRRLTGVEDLLAPFGAKGRTAMIGYVFDED 229 Query: 63 WANANKDLVARFIAVTRAAKEILATSDAEWDTIAPLTGAQDAATLHAYRERYREGIPRRP 122 WA ++DLVARF++VT AKEILA SDAEW TIAPLTGA D ATL YR+RYREGIPRRP Sbjct: 230 WAGKHRDLVARFLSVTAKAKEILAASDAEWQTIAPLTGAPDDATLRVYRDRYREGIPRRP 289 Query: 123 IADEEADARVLYRVLAQLGGRDLVGTATELDPGTFYQA 160 +A+EEADAR+LY VLA +GGRDLVG + EL PGT+Y+A Sbjct: 290 VAEEEADARILYGVLAAIGGRDLVGPSPELSPGTYYRA 327 >ref|YP_002360358.1| ABC transporter substrate-binding protein [Methylocella silvestris BL2] gb|ACK48996.1| ABC transporter substrate-binding protein [Methylocella silvestris BL2] Length = 351 Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust. Identities = 80/157 (50%), Positives = 108/157 (68%) Query: 3 PPLLAAKTLGGEMDATLNYWNFCAALEAKGFRRLAGMEEILQKLGSKGRIAMIGYVFDEA 62 P LL K + GE+DA L +WN+ ALE++GFRRL GM+E+ + LG+KG +AM GYVFDE+ Sbjct: 185 PALLYEKAVAGELDANLTFWNYAVALESRGFRRLIGMDEVERSLGAKGPLAMTGYVFDES 244 Query: 63 WANANKDLVARFIAVTRAAKEILATSDAEWDTIAPLTGAQDAATLHAYRERYREGIPRRP 122 A + D +ARF V A+E LA+SDA+W I G D L YR+RY +G P+R Sbjct: 245 LAKTHGDALARFFQVAHQARERLASSDADWQRIGKELGVTDPKELALYRQRYVDGFPKRS 304 Query: 123 IADEEADARVLYRVLAQLGGRDLVGTATELDPGTFYQ 159 +ADEEADA LY ++ ++GG +LVG AT L+PG FY+ Sbjct: 305 VADEEADAATLYAIVREIGGPELVGAATTLNPGVFYK 341 >ref|ZP_08072203.1| ABC transporter substrate-binding protein [Methylocystis sp. ATCC 49242] gb|EFY00005.1| ABC transporter substrate-binding protein [Methylocystis sp. ATCC 49242] Length = 326 Score = 167 bits (422), Expect = 6e-40, Method: Compositional matrix adjust. Identities = 80/157 (50%), Positives = 109/157 (69%) Query: 3 PPLLAAKTLGGEMDATLNYWNFCAALEAKGFRRLAGMEEILQKLGSKGRIAMIGYVFDEA 62 PPL+A K GE+DA L +WNF A LEAKGF R + ++ + LG+KG + + GYVFDEA Sbjct: 164 PPLIAEKAQQGEIDAALEFWNFAADLEAKGFTRAIELADVEKALGAKGDVVITGYVFDEA 223 Query: 63 WANANKDLVARFIAVTRAAKEILATSDAEWDTIAPLTGAQDAATLHAYRERYREGIPRRP 122 +A N+D ++RF A+T+ AKE+++T+D W A G + AATL AYR+RY G+P+R Sbjct: 224 FAAKNRDALSRFFAMTKKAKELISTNDKAWAVAAQRIGPRGAATLEAYRKRYVAGVPKRA 283 Query: 123 IADEEADARVLYRVLAQLGGRDLVGTATELDPGTFYQ 159 + DEEADA LY+ LA++GG LVG A LD G FY+ Sbjct: 284 VKDEEADAAALYKALAEIGGEKLVGPARTLDAGVFYK 320