BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0160.0006.p (295 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002290704.1| major facilitator superfamily MFS_1 [Oligotr... 390 e-106 ref|YP_001207022.1| major facilitator superfamily permease [Brad... 389 e-106 ref|YP_571850.1| major facilitator transporter [Nitrobacter hamb... 385 e-105 ref|YP_001241446.1| major facilitator superfamily permease [Brad... 379 e-103 ref|NP_771687.1| transport protein [Bradyrhizobium japonicum USD... 325 5e-87 >ref|YP_002290704.1| major facilitator superfamily MFS_1 [Oligotropha carboxidovorans OM5] ref|YP_004634388.1| putative MFS transporter protein [Oligotropha carboxidovorans OM5] gb|ACI94839.1| major facilitator superfamily MFS_1 [Oligotropha carboxidovorans OM5] gb|AEI04642.1| putative MFS transporter protein [Oligotropha carboxidovorans OM4] gb|AEI08271.1| putative MFS transporter protein [Oligotropha carboxidovorans OM5] Length = 393 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 214/286 (74%), Positives = 235/286 (82%), Gaps = 3/286 (1%) Query: 13 IGMGLGLYDAAFGTLGRIYGNDARAAITGITLIAGFASTVGWPLSSLGLATIGWRETCYA 72 IGM GLYDAAF LGRIYG++AR AITGITLIAGFASTVGWPLSS GL TIGWR TCYA Sbjct: 108 IGMATGLYDAAFSALGRIYGDNARRAITGITLIAGFASTVGWPLSSWGLETIGWRNTCYA 167 Query: 73 WAIAHLVIGLPLNL-LLPRTERAASSQALHVKPHIRIDRTMVVLSFAFAAAWTVTSAMAA 131 WA AHL+IGLPLNL LP+ A ++ VKPHI+IDR M++LS AFAAAWTVTSAMAA Sbjct: 168 WAAAHLLIGLPLNLLFLPKVAVAKRAEGSAVKPHIQIDRPMILLSLAFAAAWTVTSAMAA 227 Query: 132 HLPRIVEAFGATPAQAVFAGMMIGPAQVAARILEAGFLSRFHPLLSTRLACLTHPIGACV 191 HLPRIVEAFGATPAQAVFAGMMIGPAQVAAR+LEA L RFHPL STRLAC+THPIGACV Sbjct: 228 HLPRIVEAFGATPAQAVFAGMMIGPAQVAARVLEASTLGRFHPLFSTRLACITHPIGACV 287 Query: 192 IGIFGGGAAAAFALLHGAGNGILTIARGTLPLAIFGSENYAYRLGLIGAPSRICQALAPL 251 IGIFGG AA AFALLHGAGNG+LTI+RGTLPLAIFG EN+ YRLGL+GAPSR+CQA+APL Sbjct: 288 IGIFGGPAAVAFALLHGAGNGLLTISRGTLPLAIFGPENFGYRLGLLGAPSRVCQAVAPL 347 Query: 252 AFGLLIEPMGRAVVVVSAGLSLSALIALAM--LPRTKSAPSSAPAE 295 F LLI+ G VVV S+ LSL A AL +P K APA+ Sbjct: 348 GFSLLIDSFGGGVVVASSMLSLVAFGALLFMPMPTAKLVMDDAPAK 393 >ref|YP_001207022.1| major facilitator superfamily permease [Bradyrhizobium sp. ORS 278] emb|CAL78805.1| putative Permease of the major facilitator superfamily [Bradyrhizobium sp. ORS 278] Length = 396 Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust. Identities = 215/283 (75%), Positives = 242/283 (85%) Query: 13 IGMGLGLYDAAFGTLGRIYGNDARAAITGITLIAGFASTVGWPLSSLGLATIGWRETCYA 72 +GMGLGLYDAAFG LGRIYG DAR AITGITL+AGFASTVGWPLS+ GLATIGWRETC+A Sbjct: 108 VGMGLGLYDAAFGALGRIYGKDARGAITGITLLAGFASTVGWPLSTWGLATIGWRETCFA 167 Query: 73 WAIAHLVIGLPLNLLLPRTERAASSQALHVKPHIRIDRTMVVLSFAFAAAWTVTSAMAAH 132 WA+AHLVIGLPLNL LPRT A KP+I +DR MV+++FA AAAWTVT+AMA H Sbjct: 168 WAVAHLVIGLPLNLSLPRTTAMAPGDMPVGKPNIPLDRPMVLIAFAMAAAWTVTAAMAVH 227 Query: 133 LPRIVEAFGATPAQAVFAGMMIGPAQVAARILEAGFLSRFHPLLSTRLACLTHPIGACVI 192 LPR+++AFGATPAQA+FAGMMIGPAQVAAR+ EAGFLSRFHPL S RLAC+THPIGA I Sbjct: 228 LPRLMQAFGATPAQALFAGMMIGPAQVAARVFEAGFLSRFHPLASARLACITHPIGALTI 287 Query: 193 GIFGGGAAAAFALLHGAGNGILTIARGTLPLAIFGSENYAYRLGLIGAPSRICQALAPLA 252 G+FGGGAAAAFALLHG+GNGILTIARGTLPLAIFG NYAYRLGLIGAPSRICQA APL Sbjct: 288 GLFGGGAAAAFALLHGSGNGILTIARGTLPLAIFGPANYAYRLGLIGAPSRICQAFAPLV 347 Query: 253 FGLLIEPMGRAVVVVSAGLSLSALIALAMLPRTKSAPSSAPAE 295 FGLLI+ +GR V++VSA LSLSAL AL +L ++ S+ P Sbjct: 348 FGLLIDALGRGVLIVSASLSLSALTALMLLSAERADASAVPGS 390 >ref|YP_571850.1| major facilitator transporter [Nitrobacter hamburgensis X14] gb|ABE65018.1| major facilitator superfamily MFS_1 [Nitrobacter hamburgensis X14] Length = 393 Score = 385 bits (989), Expect = e-105, Method: Compositional matrix adjust. Identities = 222/281 (79%), Positives = 244/281 (86%), Gaps = 1/281 (0%) Query: 13 IGMGLGLYDAAFGTLGRIYGNDARAAITGITLIAGFASTVGWPLSSLGLATIGWRETCYA 72 IGMG GLYDAAFG LGRIYGNDAR AITGITLIAGFASTVGWPLSS GL IGWR TCYA Sbjct: 108 IGMGTGLYDAAFGALGRIYGNDARRAITGITLIAGFASTVGWPLSSFGLEAIGWRATCYA 167 Query: 73 WAIAHLVIGLPLNLL-LPRTERAASSQALHVKPHIRIDRTMVVLSFAFAAAWTVTSAMAA 131 WA+AHL++G PLNLL LPR A ++A VKPH+ IDRTM++LS AFAAAWTVTSAMAA Sbjct: 168 WAVAHLLVGFPLNLLFLPRVTTAKRNEASTVKPHMPIDRTMILLSLAFAAAWTVTSAMAA 227 Query: 132 HLPRIVEAFGATPAQAVFAGMMIGPAQVAARILEAGFLSRFHPLLSTRLACLTHPIGACV 191 HLPRIVEAFGATPAQAVFAGMMIGPAQVAAR+LEAG L RFHPL STRLAC+THPIGAC+ Sbjct: 228 HLPRIVEAFGATPAQAVFAGMMIGPAQVAARVLEAGTLGRFHPLFSTRLACITHPIGACI 287 Query: 192 IGIFGGGAAAAFALLHGAGNGILTIARGTLPLAIFGSENYAYRLGLIGAPSRICQALAPL 251 IGIFGGGAAAAFALLHGAGNG+LTIARGTLPL IFG ENY YRLGL+GAPSR+CQALAPL Sbjct: 288 IGIFGGGAAAAFALLHGAGNGLLTIARGTLPLEIFGPENYGYRLGLLGAPSRVCQALAPL 347 Query: 252 AFGLLIEPMGRAVVVVSAGLSLSALIALAMLPRTKSAPSSA 292 F LLI+P+G AV++VS+ LSL A AL +LPR + + A Sbjct: 348 GFSLLIDPLGGAVLIVSSLLSLVAFGALLLLPRHATKDTVA 388 >ref|YP_001241446.1| major facilitator superfamily permease [Bradyrhizobium sp. BTAi1] gb|ABQ37540.1| putative Permease of the major facilitator superfamily [Bradyrhizobium sp. BTAi1] Length = 395 Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust. Identities = 202/252 (80%), Positives = 224/252 (88%) Query: 13 IGMGLGLYDAAFGTLGRIYGNDARAAITGITLIAGFASTVGWPLSSLGLATIGWRETCYA 72 +GMGLGLYDAAFGTLGRIYG DAR AITGITLIAGFASTVGWPLS+ GLATIGWRETC+A Sbjct: 108 VGMGLGLYDAAFGTLGRIYGKDARGAITGITLIAGFASTVGWPLSTWGLATIGWRETCFA 167 Query: 73 WAIAHLVIGLPLNLLLPRTERAASSQALHVKPHIRIDRTMVVLSFAFAAAWTVTSAMAAH 132 WAIAHLVIGLPLNL LPR + A+ + KP I +DR MV+++FA AAAWTVT+AMA H Sbjct: 168 WAIAHLVIGLPLNLSLPRATQIAAGEEQTTKPKIPLDRPMVLIAFAMAAAWTVTAAMAVH 227 Query: 133 LPRIVEAFGATPAQAVFAGMMIGPAQVAARILEAGFLSRFHPLLSTRLACLTHPIGACVI 192 LPR+++AFGATPAQA+FAGMMIGPAQVAAR++EAGFLSRFHPL S RLAC+THPIGA I Sbjct: 228 LPRLMQAFGATPAQALFAGMMIGPAQVAARVVEAGFLSRFHPLASARLACITHPIGALTI 287 Query: 193 GIFGGGAAAAFALLHGAGNGILTIARGTLPLAIFGSENYAYRLGLIGAPSRICQALAPLA 252 +FGGGAAAAFALLHG+GNGILTIARGTLPLAIFG NYAYRLGLIGAPSRICQA APL Sbjct: 288 ALFGGGAAAAFALLHGSGNGILTIARGTLPLAIFGPANYAYRLGLIGAPSRICQAFAPLV 347 Query: 253 FGLLIEPMGRAV 264 FGLLI+ +GR V Sbjct: 348 FGLLIDALGRMV 359 >ref|NP_771687.1| transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50312.1| blr5047 [Bradyrhizobium japonicum USDA 110] Length = 385 Score = 325 bits (833), Expect = 5e-87, Method: Compositional matrix adjust. Identities = 178/256 (69%), Positives = 213/256 (83%), Gaps = 1/256 (0%) Query: 13 IGMGLGLYDAAFGTLGRIYGNDARAAITGITLIAGFASTVGWPLSSLGLATIGWRETCYA 72 IGM +GLYDAAF LGRIYG +AR ITGITL+AGFASTVGWPL++ GLA IGWRETC+A Sbjct: 108 IGMAMGLYDAAFAALGRIYGTEARRPITGITLMAGFASTVGWPLTAWGLAHIGWRETCFA 167 Query: 73 WAIAHLVIGLPLNL-LLPRTERAASSQALHVKPHIRIDRTMVVLSFAFAAAWTVTSAMAA 131 WA A+++IGLPLN +LP + A + A KPH+ +DRTM++L+F FAAAWTVT AMA Sbjct: 168 WAAANILIGLPLNFFMLPAIKGAKQAAATAAKPHVPLDRTMILLAFVFAAAWTVTGAMAV 227 Query: 132 HLPRIVEAFGATPAQAVFAGMMIGPAQVAARILEAGFLSRFHPLLSTRLACLTHPIGACV 191 H PRIVEA GAT +A+ AG +IGPAQV ARILEA LSRFHPL STRLAC+THPIGA V Sbjct: 228 HFPRIVEATGATHVEAIAAGALIGPAQVLARILEASVLSRFHPLWSTRLACVTHPIGAAV 287 Query: 192 IGIFGGGAAAAFALLHGAGNGILTIARGTLPLAIFGSENYAYRLGLIGAPSRICQALAPL 251 + IFGG AA+AFALLHG+GNGILTIARGTLPL+IFG +++ YRLG+IGAP+R+ QA+APL Sbjct: 288 VAIFGGAAASAFALLHGSGNGILTIARGTLPLSIFGPKDFGYRLGIIGAPARMAQAVAPL 347 Query: 252 AFGLLIEPMGRAVVVV 267 AFGLLI+ MG V++V Sbjct: 348 AFGLLIDVMGAKVLMV 363