BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0159.0011.p         (101 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771054.1| NADH-ubiquinone oxidoreductase-related protein ...   189   8e-47
ref|YP_001205676.1| putative ETC complex I subunit region protei...   187   6e-46
ref|YP_781830.1| ETC complex I subunit region [Rhodopseudomonas ...   184   3e-45
ref|YP_001240016.1| putative ETC complex I subunit region protei...   183   6e-45
ref|ZP_07027018.1| ETC complex I subunit conserved region [Afipi...   182   1e-44

>ref|NP_771054.1| NADH-ubiquinone oxidoreductase-related protein [Bradyrhizobium
           japonicum USDA 110]
 dbj|BAC49679.1| blr4414 [Bradyrhizobium japonicum USDA 110]
          Length = 154

 Score =  189 bits (481), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 86/101 (85%), Positives = 96/101 (95%)

Query: 1   MTARIFKPAKNAMQSGRAKTKEWQLDYEPEQPRSVEPLMGWTSSTDMKQQLTLQFETKEE 60
           MTARIFKPAKNAMQSGR+KT+EWQLDYEPEQPR+VEPLMGWTSS DMKQQ+TL+F++KEE
Sbjct: 54  MTARIFKPAKNAMQSGRSKTREWQLDYEPEQPRAVEPLMGWTSSGDMKQQITLRFDSKEE 113

Query: 61  AVAYCERKGIAYQVIEPKDSAHRQIAYADNFAFRRWEPWTH 101
           AVAYCERKGIAYQVIEP+DS  R +AYADNF+FRR EPWTH
Sbjct: 114 AVAYCERKGIAYQVIEPQDSIRRPVAYADNFSFRRGEPWTH 154


>ref|YP_001205676.1| putative ETC complex I subunit region protein (fragment)
           [Bradyrhizobium sp. ORS 278]
 emb|CAL77450.1| putative ETC complex I subunit conserved region protein (fragment)
           [Bradyrhizobium sp. ORS 278]
          Length = 101

 Score =  187 bits (474), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 84/101 (83%), Positives = 96/101 (95%)

Query: 1   MTARIFKPAKNAMQSGRAKTKEWQLDYEPEQPRSVEPLMGWTSSTDMKQQLTLQFETKEE 60
           MTARIFKPAKNAMQSG+AKT++WQLDYEPEQPRSVEPLMGWTSS+DMKQQ+TL+F++KEE
Sbjct: 1   MTARIFKPAKNAMQSGKAKTRDWQLDYEPEQPRSVEPLMGWTSSSDMKQQVTLRFDSKEE 60

Query: 61  AVAYCERKGIAYQVIEPKDSAHRQIAYADNFAFRRWEPWTH 101
           A+AYCERKGI YQVIEPK+   RQ+AYADNF+FRR EPWTH
Sbjct: 61  AIAYCERKGIPYQVIEPKEPVKRQVAYADNFSFRRGEPWTH 101


>ref|YP_781830.1| ETC complex I subunit region [Rhodopseudomonas palustris BisA53]
 gb|ABJ06850.1| ETC complex I subunit conserved region [Rhodopseudomonas palustris
           BisA53]
          Length = 111

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 85/101 (84%), Positives = 94/101 (93%)

Query: 1   MTARIFKPAKNAMQSGRAKTKEWQLDYEPEQPRSVEPLMGWTSSTDMKQQLTLQFETKEE 60
           MTARIFKPAKNAMQSG AKTKEWQLDYEP QPR +EPLMGWTSSTDM+QQLTL+F T+EE
Sbjct: 11  MTARIFKPAKNAMQSGAAKTKEWQLDYEPAQPRVIEPLMGWTSSTDMRQQLTLKFHTREE 70

Query: 61  AVAYCERKGIAYQVIEPKDSAHRQIAYADNFAFRRWEPWTH 101
           A+AYCER+GIAYQVIEPK+SA R+ AY+DNFAFRR EPWTH
Sbjct: 71  AIAYCEREGIAYQVIEPKESARRRAAYSDNFAFRRTEPWTH 111


>ref|YP_001240016.1| putative ETC complex I subunit region protein [Bradyrhizobium sp.
           BTAi1]
 gb|ABQ36110.1| putative ETC complex I subunit conserved region protein
           [Bradyrhizobium sp. BTAi1]
          Length = 101

 Score =  183 bits (465), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 83/101 (82%), Positives = 95/101 (94%)

Query: 1   MTARIFKPAKNAMQSGRAKTKEWQLDYEPEQPRSVEPLMGWTSSTDMKQQLTLQFETKEE 60
           MTARIFKPAKNAMQSG+AKT++WQLDYEPE PR+VEPLMGWTSS+DMKQQ+TL+F++KEE
Sbjct: 1   MTARIFKPAKNAMQSGKAKTRDWQLDYEPELPRAVEPLMGWTSSSDMKQQVTLRFDSKEE 60

Query: 61  AVAYCERKGIAYQVIEPKDSAHRQIAYADNFAFRRWEPWTH 101
           A+AYCERKGI YQVIEPK+   RQIAYADNF+FRR EPWTH
Sbjct: 61  AIAYCERKGIPYQVIEPKEPVKRQIAYADNFSFRRGEPWTH 101


>ref|ZP_07027018.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2]
 gb|EFI51861.1| ETC complex I subunit conserved region [Afipia sp. 1NLS2]
          Length = 101

 Score =  182 bits (463), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 85/101 (84%), Positives = 91/101 (90%)

Query: 1   MTARIFKPAKNAMQSGRAKTKEWQLDYEPEQPRSVEPLMGWTSSTDMKQQLTLQFETKEE 60
           MTARIFKPAKNAMQSG+AKTKEWQLDYEPE+PR VEPLMGWTSS DMKQQ+TL F T+EE
Sbjct: 1   MTARIFKPAKNAMQSGKAKTKEWQLDYEPEKPRVVEPLMGWTSSADMKQQVTLHFHTREE 60

Query: 61  AVAYCERKGIAYQVIEPKDSAHRQIAYADNFAFRRWEPWTH 101
           AVAYCE  GIAYQV EPK+S  RQ+AYADNFAFRR EPWTH
Sbjct: 61  AVAYCEANGIAYQVQEPKESVRRQVAYADNFAFRRSEPWTH 101