BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0159.0009.p (387 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771053.1| hypothetical protein bll4413 [Bradyrhizobium ja... 677 0.0 ref|YP_001240015.1| hypothetical protein BBta_4043 [Bradyrhizobi... 642 0.0 ref|YP_001205675.1| hypothetical protein BRADO3675 [Bradyrhizobi... 640 0.0 ref|YP_569663.1| putative OpgC protein [Rhodopseudomonas palustr... 632 e-179 ref|YP_004109245.1| hypothetical protein Rpdx1_2929 [Rhodopseudo... 622 e-176 >ref|NP_771053.1| hypothetical protein bll4413 [Bradyrhizobium japonicum USDA 110] dbj|BAC49678.1| bll4413 [Bradyrhizobium japonicum USDA 110] Length = 390 Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust. Identities = 323/370 (87%), Positives = 349/370 (94%) Query: 1 MEIHATLPEKGRDLRLDLFRGVANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 + I+ATLPEKGRDLRLDLFRGVANWAI+LDHIPDNVVNWITTRNYGFSDAADLFVFISGY Sbjct: 4 LNINATLPEKGRDLRLDLFRGVANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 63 Query: 61 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSEIINEF 120 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDS++INEF Sbjct: 64 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSDMINEF 123 Query: 121 NVAGLVDNATETLRQGLFLKFKPVNLDVLPLYIVLMGLFPPVLWFMLRRPNWTMAASLVL 180 NVAGLVDNATETLRQGLFL+FKP+NLDVLPLYIVLMGLFPPVLWFMLR+P+ TM S+VL Sbjct: 124 NVAGLVDNATETLRQGLFLRFKPLNLDVLPLYIVLMGLFPPVLWFMLRKPDLTMVLSIVL 183 Query: 181 WLVSRHQGWNLPAYPAGSWYFNPFAWQVLFVFGSWCAMGGARNNMRIINSRYTLWFCIAY 240 WL +RH GWNL AYPAG WYFNP+AWQVLFVFG+WCAMGGAR +M +INS TLW C+ Y Sbjct: 184 WLAARHFGWNLTAYPAGQWYFNPYAWQVLFVFGAWCAMGGARRSMTLINSPITLWLCLGY 243 Query: 241 MIFALIMTMAGRFPDFGAMFPDWLYSAFNPNDKTNLAPYRFLHFVVITVLVIRFIPKDWA 300 ++FAL+MTMAGRFP G MFP+WL+SAFNPNDKTNLAPYRF+HFVVI +LVIRF+PKDW Sbjct: 244 LLFALVMTMAGRFPAIGGMFPEWLFSAFNPNDKTNLAPYRFIHFVVIVILVIRFVPKDWP 303 Query: 301 ALEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQIFVSISGIAIMTIVA 360 LEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQ+FVSI+GIAIMT VA Sbjct: 304 GLEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQLFVSIAGIAIMTTVA 363 Query: 361 YYISWSKRQD 370 YYISWSKRQD Sbjct: 364 YYISWSKRQD 373 >ref|YP_001240015.1| hypothetical protein BBta_4043 [Bradyrhizobium sp. BTAi1] gb|ABQ36109.1| putative membrane protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 385 Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust. Identities = 308/387 (79%), Positives = 345/387 (89%), Gaps = 4/387 (1%) Query: 1 MEIHATLPEKGRDLRLDLFRGVANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 M+I+ATLPE+GRDLRLDLFRG+ANWAI+LDHIPDNVVNWITTRNYGFSDAADLFVFISGY Sbjct: 1 MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSEIINEF 120 TASFVYARMM++RGFIVGATRL KRVWQLYVAHI+LFVIYI +ISYLA RFG SEII+EF Sbjct: 61 TASFVYARMMIDRGFIVGATRLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEF 120 Query: 121 NVAGLVDNATETLRQGLFLKFKPVNLDVLPLYIVLMGLFPPVLWFMLRRPNWTMAASLVL 180 NVAGLVD+A++TL QGL LKFKPVNLDVLPLYIVLMG FPPVLW MLR+P+ TM AS+VL Sbjct: 121 NVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFPPVLWLMLRQPDITMIASIVL 180 Query: 181 WLVSRHQGWNLPAYPAGSWYFNPFAWQVLFVFGSWCAMGGARNNMRIINSRYTLWFCIAY 240 WL++R GWN AYPAG+WYFNP+ WQVLFVFGSWCA+GGAR +M II + TL+FC+ Y Sbjct: 181 WLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLGY 240 Query: 241 MIFALIMTMAGRFPDFGAMFPDWLYSAFNPNDKTNLAPYRFLHFVVITVLVIRFIPKDWA 300 ++ ALIMTMAGRFPD+G M P WLYSAFNPNDKTNLAPYRFLHFVVI +LVIRF+PK+W Sbjct: 241 LLLALIMTMAGRFPDYGTMLPHWLYSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWP 300 Query: 301 ALEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQIFVSISGIAIMTIVA 360 LEWK FDPL+VCGQQSLAVFCVGVFLSF+GHF L +SSGSL AQI VS +GIAIMT VA Sbjct: 301 GLEWKGFDPLVVCGQQSLAVFCVGVFLSFIGHFTLMLSSGSLLAQILVSAAGIAIMTTVA 360 Query: 361 YYISWSKRQDKPVKPPAAKPSTTATAA 387 YYISWSKRQDKP+ KP+T TAA Sbjct: 361 YYISWSKRQDKPLP----KPATPKTAA 383 >ref|YP_001205675.1| hypothetical protein BRADO3675 [Bradyrhizobium sp. ORS 278] emb|CAL77449.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 385 Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust. Identities = 303/370 (81%), Positives = 340/370 (91%) Query: 1 MEIHATLPEKGRDLRLDLFRGVANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 M+I+ATLPE+GRDLRLDLFRG+ANWAI+LDHIPDNVVNWITTRNYGFSDAADLFVFISGY Sbjct: 1 MKINATLPERGRDLRLDLFRGIANWAIFLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSEIINEF 120 TASFVYARMM++RGFIVGATRL KRVWQLYVAHI+LFVIYI +ISYLA RFG SEII+EF Sbjct: 61 TASFVYARMMIDRGFIVGATRLFKRVWQLYVAHIVLFVIYIVAISYLATRFGVSEIIDEF 120 Query: 121 NVAGLVDNATETLRQGLFLKFKPVNLDVLPLYIVLMGLFPPVLWFMLRRPNWTMAASLVL 180 NVAGLVD+A++TL QGL LKFKPVNLDVLPLYIVLMG FPPVLW MLR+P+ TM AS+VL Sbjct: 121 NVAGLVDHASDTLAQGLILKFKPVNLDVLPLYIVLMGFFPPVLWMMLRQPDLTMIASIVL 180 Query: 181 WLVSRHQGWNLPAYPAGSWYFNPFAWQVLFVFGSWCAMGGARNNMRIINSRYTLWFCIAY 240 WL++R GWN AYPAG+WYFNP+ WQVLFVFGSWCA+GGAR +M II + TL+FC+AY Sbjct: 181 WLLARQMGWNFAAYPAGTWYFNPYCWQVLFVFGSWCALGGARRSMGIIMAPATLYFCLAY 240 Query: 241 MIFALIMTMAGRFPDFGAMFPDWLYSAFNPNDKTNLAPYRFLHFVVITVLVIRFIPKDWA 300 M+FAL+MTMAGRFPDFGAMFP WL+SAFNPNDKTNLAPYRFLHFVVI +LVIRF+PK+W+ Sbjct: 241 MLFALVMTMAGRFPDFGAMFPHWLFSAFNPNDKTNLAPYRFLHFVVIVILVIRFVPKEWS 300 Query: 301 ALEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQIFVSISGIAIMTIVA 360 LEWK FDPL+VCGQQSLAVFCVGVFLSF+GHF L +SSGSL AQ+ VS +GIAIMT VA Sbjct: 301 GLEWKGFDPLVVCGQQSLAVFCVGVFLSFIGHFTLMLSSGSLLAQVLVSAAGIAIMTTVA 360 Query: 361 YYISWSKRQD 370 YYISWSKRQD Sbjct: 361 YYISWSKRQD 370 >ref|YP_569663.1| putative OpgC protein [Rhodopseudomonas palustris BisB5] gb|ABE39762.1| putative OpgC protein [Rhodopseudomonas palustris BisB5] Length = 427 Score = 632 bits (1630), Expect = e-179, Method: Compositional matrix adjust. Identities = 299/379 (78%), Positives = 333/379 (87%) Query: 1 MEIHATLPEKGRDLRLDLFRGVANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 M+I A LP KGRDLRLDLFRG+ANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY Sbjct: 1 MQIQAILPGKGRDLRLDLFRGLANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSEIINEF 120 TASFVYA+MMLERGFIVG TRLTKRVWQLYVAHI+LFVIYI +I Y+ALRF D +IINEF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVALRFSDPDIINEF 120 Query: 121 NVAGLVDNATETLRQGLFLKFKPVNLDVLPLYIVLMGLFPPVLWFMLRRPNWTMAASLVL 180 NVAGLVDN ETLRQGL LKFKPVNLDVLPLYIVLMGLFPPVLW MLRRP+ M AS L Sbjct: 121 NVAGLVDNPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRRPDMVMIASFAL 180 Query: 181 WLVSRHQGWNLPAYPAGSWYFNPFAWQVLFVFGSWCAMGGARNNMRIINSRYTLWFCIAY 240 + +R+ WNL +YPAG+WYFNPF WQ+LFVFG+WCA+GG+ + IINSRY LWFCI Y Sbjct: 181 YFTARYFDWNLQSYPAGTWYFNPFCWQLLFVFGAWCALGGSTRSRSIINSRYMLWFCITY 240 Query: 241 MIFALIMTMAGRFPDFGAMFPDWLYSAFNPNDKTNLAPYRFLHFVVITVLVIRFIPKDWA 300 ++FAL+MTMAGRFP FG MFP+WL+ AFNPNDKTNLAPYRFLHF V+ VLVIRFIPKDW Sbjct: 241 LVFALVMTMAGRFPGFGEMFPEWLFDAFNPNDKTNLAPYRFLHFAVLVVLVIRFIPKDWK 300 Query: 301 ALEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQIFVSISGIAIMTIVA 360 LE +FDPLI CGQQSLAVFCVGVFLSFVGHF L +S G+L AQI VS++GIA+MT+VA Sbjct: 301 GLESPIFDPLIKCGQQSLAVFCVGVFLSFVGHFALMLSWGTLLAQIVVSVTGIALMTMVA 360 Query: 361 YYISWSKRQDKPVKPPAAK 379 YYI+WSK+QDKP+KP AK Sbjct: 361 YYITWSKKQDKPLKPALAK 379 >ref|YP_004109245.1| hypothetical protein Rpdx1_2929 [Rhodopseudomonas palustris DX-1] gb|ADU44512.1| conserved hypothetical protein [Rhodopseudomonas palustris DX-1] Length = 429 Score = 622 bits (1603), Expect = e-176, Method: Compositional matrix adjust. Identities = 294/370 (79%), Positives = 325/370 (87%) Query: 1 MEIHATLPEKGRDLRLDLFRGVANWAIYLDHIPDNVVNWITTRNYGFSDAADLFVFISGY 60 MEI A LP KGRDLRLDLFRGVANWAIYLDHIP+NVVNWITTRNYGFSDAADLFVFISGY Sbjct: 1 MEIQAILPSKGRDLRLDLFRGVANWAIYLDHIPNNVVNWITTRNYGFSDAADLFVFISGY 60 Query: 61 TASFVYARMMLERGFIVGATRLTKRVWQLYVAHIILFVIYIASISYLALRFGDSEIINEF 120 TASFVYA+MMLERGFIVG TRLTKRVWQLYVAHI+LFVIYI +I Y+A RF D EIINEF Sbjct: 61 TASFVYAKMMLERGFIVGGTRLTKRVWQLYVAHIVLFVIYIVAIGYVAQRFSDPEIINEF 120 Query: 121 NVAGLVDNATETLRQGLFLKFKPVNLDVLPLYIVLMGLFPPVLWFMLRRPNWTMAASLVL 180 NVAGL+ N ETLRQGL LKFKPVNLDVLPLYIVLMGLFPPVLW MLR+P+ M S VL Sbjct: 121 NVAGLIANPIETLRQGLLLKFKPVNLDVLPLYIVLMGLFPPVLWLMLRKPDAVMIGSFVL 180 Query: 181 WLVSRHQGWNLPAYPAGSWYFNPFAWQVLFVFGSWCAMGGARNNMRIINSRYTLWFCIAY 240 + +R+ WNL A+P G+WYFNPF WQ+LFVFG+WCA+GG + II+SR LWFC+AY Sbjct: 181 YFAARYFEWNLQAFPEGTWYFNPFCWQLLFVFGAWCALGGTVRSRSIIDSRGMLWFCLAY 240 Query: 241 MIFALIMTMAGRFPDFGAMFPDWLYSAFNPNDKTNLAPYRFLHFVVITVLVIRFIPKDWA 300 ++FAL+MTMAGRF DFG +FP WLY AFNPNDKTNLAPYRFLHF VI VLVIRF+PKDW+ Sbjct: 241 LVFALVMTMAGRFQDFGELFPAWLYGAFNPNDKTNLAPYRFLHFAVIVVLVIRFVPKDWS 300 Query: 301 ALEWKVFDPLIVCGQQSLAVFCVGVFLSFVGHFELSMSSGSLFAQIFVSISGIAIMTIVA 360 LEW+VFDPLI CGQQSLAVFCVGVFLSFV HFEL+MSSGSL AQI VS+ GIA+MT+VA Sbjct: 301 GLEWRVFDPLIKCGQQSLAVFCVGVFLSFVAHFELTMSSGSLLAQILVSVVGIALMTVVA 360 Query: 361 YYISWSKRQD 370 YYISWSK+QD Sbjct: 361 YYISWSKQQD 370