BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0159.0005.p         (155 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08630020.1| cyclase [Bradyrhizobiaceae bacterium SG-6C] >...   302   1e-80
ref|NP_772699.1| cyclase [Bradyrhizobium japonicum USDA 110] >gi...   294   4e-78
ref|NP_948781.1| putative cyclase [Rhodopseudomonas palustris CG...   293   5e-78
ref|YP_001207389.1| putative cyclase [Bradyrhizobium sp. ORS 278...   292   9e-78
ref|YP_001241824.1| putative cyclase [Bradyrhizobium sp. BTAi1] ...   290   4e-77

>ref|ZP_08630020.1| cyclase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07389.1| cyclase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 258

 Score =  302 bits (773), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 144/154 (93%), Positives = 148/154 (96%)

Query: 1   VKLDFRHLPDGYVATAKDVEAELKRIRHTLSPLEIVVVNTSAGAKYGRPDYVNSGCGMGY 60
           VKLDFRH PDGYVATA DVEAELKRI HTL PLEIVVVNTSAG KYG+PDYV SGCGMGY
Sbjct: 104 VKLDFRHFPDGYVATAADVEAELKRIGHTLKPLEIVVVNTSAGVKYGQPDYVISGCGMGY 163

Query: 61  EATMYLLERGVRLTGIDGWSWDAPFVFTAKRYAETRDASLIWEGHKAGRHIGYCHIEKLH 120
           EATMYLLERGVRLTGIDGWSWDAPFV+TAK+YAET+DASLIWEGHKAGRHIGYCHIEKLH
Sbjct: 164 EATMYLLERGVRLTGIDGWSWDAPFVYTAKKYAETKDASLIWEGHKAGRHIGYCHIEKLH 223

Query: 121 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD 154
           NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD
Sbjct: 224 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD 257


>ref|NP_772699.1| cyclase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51324.1| blr6059 [Bradyrhizobium japonicum USDA 110]
          Length = 342

 Score =  294 bits (752), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 139/155 (89%), Positives = 146/155 (94%)

Query: 1   VKLDFRHLPDGYVATAKDVEAELKRIRHTLSPLEIVVVNTSAGAKYGRPDYVNSGCGMGY 60
           VKLDFRHLPDGYV TA DVE ELKRI HTLSPLEIVVVNTSAGAK+G+ DYVNSGCGMGY
Sbjct: 188 VKLDFRHLPDGYVVTAADVEKELKRIGHTLSPLEIVVVNTSAGAKFGQADYVNSGCGMGY 247

Query: 61  EATMYLLERGVRLTGIDGWSWDAPFVFTAKRYAETRDASLIWEGHKAGRHIGYCHIEKLH 120
           EATMYLLERGVRLTG DGWSWDAPFV+TAKRYAETRDA LIWEGHKAGRHIGYCH+EKLH
Sbjct: 248 EATMYLLERGVRLTGTDGWSWDAPFVYTAKRYAETRDAGLIWEGHKAGRHIGYCHLEKLH 307

Query: 121 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILDG 155
           NL++LPS GF VSCFPVKIERASAGWTRAVAI+DG
Sbjct: 308 NLDRLPSAGFTVSCFPVKIERASAGWTRAVAIIDG 342


>ref|NP_948781.1| putative cyclase [Rhodopseudomonas palustris CGA009]
 emb|CAE28883.1| Putative cyclase [Rhodopseudomonas palustris CGA009]
          Length = 258

 Score =  293 bits (751), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 138/154 (89%), Positives = 147/154 (95%)

Query: 1   VKLDFRHLPDGYVATAKDVEAELKRIRHTLSPLEIVVVNTSAGAKYGRPDYVNSGCGMGY 60
           VKLDFRHLPDGYV TAKDVE EL+RI HTL+PLEIVVVNTSAGAK+GRPDYVNSGCG+GY
Sbjct: 104 VKLDFRHLPDGYVVTAKDVENELERIGHTLAPLEIVVVNTSAGAKFGRPDYVNSGCGVGY 163

Query: 61  EATMYLLERGVRLTGIDGWSWDAPFVFTAKRYAETRDASLIWEGHKAGRHIGYCHIEKLH 120
           EATMYLLERGVRLTG D WSWDAPFVFTA+RYAET+DASLIWEGHKA RHIGYCH+EKLH
Sbjct: 164 EATMYLLERGVRLTGTDAWSWDAPFVFTAQRYAETKDASLIWEGHKASRHIGYCHLEKLH 223

Query: 121 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD 154
           NLE LP+TGFMVSCFPVKIERASAGWTRAVAIL+
Sbjct: 224 NLELLPATGFMVSCFPVKIERASAGWTRAVAILN 257


>ref|YP_001207389.1| putative cyclase [Bradyrhizobium sp. ORS 278]
 emb|CAL79172.1| putative cyclase [Bradyrhizobium sp. ORS 278]
          Length = 258

 Score =  292 bits (748), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 137/154 (88%), Positives = 147/154 (95%)

Query: 1   VKLDFRHLPDGYVATAKDVEAELKRIRHTLSPLEIVVVNTSAGAKYGRPDYVNSGCGMGY 60
           VKLDFRH PDGYV TAKDVEAELKRI HTLSPLEIVVVNTSAGA++G+ +YVNSGCGMGY
Sbjct: 104 VKLDFRHFPDGYVVTAKDVEAELKRIGHTLSPLEIVVVNTSAGARFGQANYVNSGCGMGY 163

Query: 61  EATMYLLERGVRLTGIDGWSWDAPFVFTAKRYAETRDASLIWEGHKAGRHIGYCHIEKLH 120
           EATMYLLERGVRLTG DGWSWDAPFVFTA++YAET DA+LIWEGHKAGRHIGYCH+EKLH
Sbjct: 164 EATMYLLERGVRLTGTDGWSWDAPFVFTAQKYAETHDAALIWEGHKAGRHIGYCHLEKLH 223

Query: 121 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD 154
           NLEQLP TGFMVSCFPVKIERASAGWTRAVAI++
Sbjct: 224 NLEQLPPTGFMVSCFPVKIERASAGWTRAVAIVE 257


>ref|YP_001241824.1| putative cyclase [Bradyrhizobium sp. BTAi1]
 gb|ABQ37918.1| putative cyclase [Bradyrhizobium sp. BTAi1]
          Length = 258

 Score =  290 bits (743), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 137/154 (88%), Positives = 144/154 (93%)

Query: 1   VKLDFRHLPDGYVATAKDVEAELKRIRHTLSPLEIVVVNTSAGAKYGRPDYVNSGCGMGY 60
           VKLDFRH PDGYV TAKDVE ELKRI HTLSPLEIVVVNT+AGA+YG+ +YVNSGCGMGY
Sbjct: 104 VKLDFRHFPDGYVVTAKDVEEELKRIGHTLSPLEIVVVNTAAGARYGQANYVNSGCGMGY 163

Query: 61  EATMYLLERGVRLTGIDGWSWDAPFVFTAKRYAETRDASLIWEGHKAGRHIGYCHIEKLH 120
           EATMYLLERGVRLTG DGWSWDAPFVFTAK YAET DAS+IWEGHKAGRHIGYCH+EKLH
Sbjct: 164 EATMYLLERGVRLTGTDGWSWDAPFVFTAKTYAETHDASIIWEGHKAGRHIGYCHLEKLH 223

Query: 121 NLEQLPSTGFMVSCFPVKIERASAGWTRAVAILD 154
           NLEQLP TGF VSCFPVKIERASAGWTRAVAI+D
Sbjct: 224 NLEQLPPTGFTVSCFPVKIERASAGWTRAVAIID 257