BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0159.0004.p         (110 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001207389.1| putative cyclase [Bradyrhizobium sp. ORS 278...   187   5e-46
ref|YP_001241824.1| putative cyclase [Bradyrhizobium sp. BTAi1] ...   185   2e-45
ref|NP_948781.1| putative cyclase [Rhodopseudomonas palustris CG...   184   5e-45
ref|ZP_08630020.1| cyclase [Bradyrhizobiaceae bacterium SG-6C] >...   183   8e-45
ref|NP_772699.1| cyclase [Bradyrhizobium japonicum USDA 110] >gi...   181   5e-44

>ref|YP_001207389.1| putative cyclase [Bradyrhizobium sp. ORS 278]
 emb|CAL79172.1| putative cyclase [Bradyrhizobium sp. ORS 278]
          Length = 258

 Score =  187 bits (475), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 89/90 (98%)

Query: 1  MARRLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60
          MAR+LIDISVPLQNDVPADPPGNHPTI YIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE
Sbjct: 1  MARKLIDISVPLQNDVPADPPGNHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60

Query: 61 QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 90
          QV+LSTHNGTHLDAPWHFHPTMNRGER+WT
Sbjct: 61 QVNLSTHNGTHLDAPWHFHPTMNRGERAWT 90


>ref|YP_001241824.1| putative cyclase [Bradyrhizobium sp. BTAi1]
 gb|ABQ37918.1| putative cyclase [Bradyrhizobium sp. BTAi1]
          Length = 258

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 85/90 (94%), Positives = 88/90 (97%)

Query: 1  MARRLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60
          MAR+LIDISVPLQNDVPADPPG HPTI YIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE
Sbjct: 1  MARKLIDISVPLQNDVPADPPGTHPTITYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60

Query: 61 QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 90
          QV+LSTHNGTHLDAPWHFHPTMNRGER+WT
Sbjct: 61 QVNLSTHNGTHLDAPWHFHPTMNRGERAWT 90


>ref|NP_948781.1| putative cyclase [Rhodopseudomonas palustris CGA009]
 emb|CAE28883.1| Putative cyclase [Rhodopseudomonas palustris CGA009]
          Length = 258

 Score =  184 bits (466), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 86/90 (95%), Positives = 88/90 (97%)

Query: 1  MARRLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60
          MAR+LIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFF GLKAEDLPDGQGWAVE
Sbjct: 1  MARKLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFPGLKAEDLPDGQGWAVE 60

Query: 61 QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 90
          QVSLSTHNGTHLDAPWHFHPTMNRGER+ T
Sbjct: 61 QVSLSTHNGTHLDAPWHFHPTMNRGERALT 90


>ref|ZP_08630020.1| cyclase [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP07389.1| cyclase [Bradyrhizobiaceae bacterium SG-6C]
          Length = 258

 Score =  183 bits (464), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 84/90 (93%), Positives = 87/90 (96%)

Query: 1  MARRLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60
          M R+LIDISVPLQNDVPADPPG HPTIQYIDHQQGLPRMLQFFDGLK EDLPDGQGWAVE
Sbjct: 1  MTRKLIDISVPLQNDVPADPPGGHPTIQYIDHQQGLPRMLQFFDGLKKEDLPDGQGWAVE 60

Query: 61 QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 90
          QV+LSTHNGTHLDAP+HFHPTMNRGERSWT
Sbjct: 61 QVNLSTHNGTHLDAPYHFHPTMNRGERSWT 90


>ref|NP_772699.1| cyclase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC51324.1| blr6059 [Bradyrhizobium japonicum USDA 110]
          Length = 342

 Score =  181 bits (458), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 83/90 (92%), Positives = 86/90 (95%)

Query: 1   MARRLIDISVPLQNDVPADPPGNHPTIQYIDHQQGLPRMLQFFDGLKAEDLPDGQGWAVE 60
           M R LIDISVPL+NDV +DPPGNHPTI YIDHQQGLPRMLQFFDGLKA+DLPDGQGWAVE
Sbjct: 85  MPRTLIDISVPLRNDVTSDPPGNHPTIHYIDHQQGLPRMLQFFDGLKAQDLPDGQGWAVE 144

Query: 61  QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 90
           QVSLSTHNGTHLDAPWHFHPTMNRGERSWT
Sbjct: 145 QVSLSTHNGTHLDAPWHFHPTMNRGERSWT 174