BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0158.0011.p         (99 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_771980.1| hypothetical protein bll5340 [Bradyrhizobium ja...   160   5e-38
ref|YP_001240923.1| hypothetical protein BBta_5014 [Bradyrhizobi...   136   1e-30
ref|YP_001206291.1| hypothetical protein BRADO4319 [Bradyrhizobi...   131   3e-29
ref|NP_891070.1| hypothetical protein BB4536 [Bordetella bronchi...   127   6e-28
ref|NP_879239.1| hypothetical protein BP0367 [Bordetella pertuss...   127   8e-28

>ref|NP_771980.1| hypothetical protein bll5340 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC50605.1| bll5340 [Bradyrhizobium japonicum USDA 110]
          Length = 213

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 73/99 (73%), Positives = 88/99 (88%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           +A Q+DV LPIVIV+GM++GCAGGVLRD+LCN+VPLLFRSELYASVSVVTGLFY    GL
Sbjct: 115 IAWQMDVSLPIVIVSGMVTGCAGGVLRDVLCNDVPLLFRSELYASVSVVTGLFYATAFGL 174

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGEER 99
            +NA+LWT LTF LG++FR+LA+RY+WEMPKFVF  +ER
Sbjct: 175 NLNAELWTILTFILGISFRLLAVRYKWEMPKFVFKEDER 213


>ref|YP_001240923.1| hypothetical protein BBta_5014 [Bradyrhizobium sp. BTAi1]
 gb|ABQ37017.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 214

 Score =  136 bits (342), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 67/99 (67%), Positives = 83/99 (83%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           +A Q++VP+ IVIVAGMI+GCAGGVLRDILCN+VPLLFR+ELYASVS++TGL Y  G  L
Sbjct: 115 IAWQMNVPIGIVIVAGMITGCAGGVLRDILCNDVPLLFRAELYASVSLLTGLLYAGGLSL 174

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGEER 99
            +   + TAL+FA GL FR+LAIRY+W MP+FVF GEE+
Sbjct: 175 GLAGGILTALSFAFGLAFRLLAIRYKWNMPRFVFTGEEQ 213


>ref|YP_001206291.1| hypothetical protein BRADO4319 [Bradyrhizobium sp. ORS 278]
 emb|CAL78067.1| conserved hypothetical protein; putative membrane protein
           [Bradyrhizobium sp. ORS 278]
          Length = 214

 Score =  131 bits (330), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 65/99 (65%), Positives = 83/99 (83%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           +A Q+ VP  IVIVAGMI+GCAGGVLRDILCN+VPLLFR+ELYASVS++TGL Y +G  L
Sbjct: 115 IAWQMGVPFGIVIVAGMITGCAGGVLRDILCNDVPLLFRAELYASVSLLTGLIYASGLSL 174

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGEER 99
            + + + TAL+FA GL+FR+LAIR++W MP+FVF GE +
Sbjct: 175 GLGSGVLTALSFAFGLSFRLLAIRHKWNMPQFVFTGEGK 213


>ref|NP_891070.1| hypothetical protein BB4536 [Bordetella bronchiseptica RB50]
 emb|CAE34899.1| putative membrane protein [Bordetella bronchiseptica RB50]
          Length = 190

 Score =  127 bits (319), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 79/97 (81%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           VA Q+++PL IV+V+GMI+GCAGGVLRD+LCN++PLLFRSELYASVS VTG  Y+A  G 
Sbjct: 92  VAQQMEMPLTIVLVSGMITGCAGGVLRDVLCNDIPLLFRSELYASVSAVTGGLYLAMYGQ 151

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGE 97
            V+A +   +  A+GL FR+LA+R+ W+MPKFV+ G+
Sbjct: 152 GVSASVSVPVALAVGLAFRLLALRFNWQMPKFVYRGD 188


>ref|NP_879239.1| hypothetical protein BP0367 [Bordetella pertussis Tohama I]
 emb|CAE44699.1| putative membrane protein [Bordetella pertussis Tohama I]
 gb|AEE65842.1| hypothetical protein BPTD_0362 [Bordetella pertussis CS]
          Length = 212

 Score =  127 bits (318), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 59/97 (60%), Positives = 79/97 (81%)

Query: 1   VASQVDVPLPIVIVAGMISGCAGGVLRDILCNEVPLLFRSELYASVSVVTGLFYVAGSGL 60
           VA Q+++PL IV+V+GMI+GCAGGVLRD+LCN++PLLFRSELYASVS VTG  Y+A  G 
Sbjct: 114 VAQQMEMPLTIVLVSGMITGCAGGVLRDVLCNDIPLLFRSELYASVSAVTGGLYLAMYGQ 173

Query: 61  QVNAQLWTALTFALGLTFRMLAIRYRWEMPKFVFNGE 97
            V+A +   +  A+GL FR+LA+R+ W+MPKFV+ G+
Sbjct: 174 GVSASVSVPVALAVGLAFRLLALRFNWQMPKFVYRGD 210