BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0158.0009.p (437 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771982.1| hypothetical protein bll5342 [Bradyrhizobium ja... 401 e-109 ref|YP_001206294.1| putative methylisocitrate lyase or carboxyvi... 397 e-108 ref|YP_577433.1| hypothetical protein Nham_2180 [Nitrobacter ham... 390 e-106 ref|YP_001240926.1| putative methylisocitrate lyase or carboxyvi... 370 e-100 ref|YP_568882.1| hypothetical protein RPD_1745 [Rhodopseudomonas... 342 8e-92 >ref|NP_771982.1| hypothetical protein bll5342 [Bradyrhizobium japonicum USDA 110] dbj|BAC50607.1| bll5342 [Bradyrhizobium japonicum USDA 110] Length = 269 Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust. Identities = 199/267 (74%), Positives = 227/267 (85%), Gaps = 3/267 (1%) Query: 1 MPLPTADKRAAFKKLHESGCFIIPNPFDVGSARALQHLGFKALASTSAGFAWTIAKADNR 60 M + TADKRA F+K+HESGCFI+PNP DVGSA+ALQHLGFKA+AS+SAGFAWTI KADN Sbjct: 1 MHVTTADKRATFRKMHESGCFILPNPVDVGSAKALQHLGFKAIASSSAGFAWTIGKADNH 60 Query: 61 VTVDDVCDHLTALCAAVDIPVNADFEGGFAVEPDKVAVNVARAVKTGVAGLSIEDSTGDA 120 VTV+DVC HL AL +AVDIPVNADFEGGFAVEPDKVA NV R V+TGVAGLSIEDSTGD Sbjct: 61 VTVEDVCQHLAALSSAVDIPVNADFEGGFAVEPDKVADNVERCVRTGVAGLSIEDSTGDK 120 Query: 121 ANPLFEHKLAVERIKAARKAIDADNSGVLLTGRCEAFLWGRKDLNLVIERLQAYSEAGAD 180 PL++ LAVERI A+RKAI +SG LL GRCEA+LWG DL LVI+RL AY++AGAD Sbjct: 121 DRPLYDRALAVERIMASRKAI--GDSGTLLVGRCEAYLWGVTDLKLVIDRLTAYADAGAD 178 Query: 181 VLYSPGIATKEEISAVVKAVAPKPVNLLIGGASELTLQSVADLGVRRISVGGALARMAWT 240 LY+PG+ ++E+I+AVVKAVAPKP NLLIGG S L+LQ DLGVRRISVGG+LAR AW Sbjct: 179 CLYAPGLKSREDIAAVVKAVAPKPFNLLIGG-SGLSLQEAEDLGVRRISVGGSLARAAWG 237 Query: 241 GVMKAAKEMAEKGTFTEFANGYPGGEL 267 G M+AAKEMAEKGTFTE +GYPGGEL Sbjct: 238 GFMRAAKEMAEKGTFTELGSGYPGGEL 264 >ref|YP_001206294.1| putative methylisocitrate lyase or carboxyvinyl-carboxyphosphonate phosphorylmutase [Bradyrhizobium sp. ORS 278] emb|CAL78070.1| putative methylisocitrate lyase or carboxyvinyl-carboxyphosphonate phosphorylmutase [Bradyrhizobium sp. ORS 278] Length = 271 Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust. Identities = 195/267 (73%), Positives = 225/267 (84%), Gaps = 1/267 (0%) Query: 1 MPLPTADKRAAFKKLHESGCFIIPNPFDVGSARALQHLGFKALASTSAGFAWTIAKADNR 60 M + TADKRAAF+KLHESGCF++PNPFD G+A+ LQHLGFKA+ASTSAGFAW+I KAD Sbjct: 1 MTVTTADKRAAFRKLHESGCFVLPNPFDAGTAKMLQHLGFKAIASTSAGFAWSIGKADTH 60 Query: 61 VTVDDVCDHLTALCAAVDIPVNADFEGGFAVEPDKVAVNVARAVKTGVAGLSIEDSTGDA 120 +D++ HL A+ AVDIPVNADFEGGFA P+ VA NVARAV+TGVAGLSIEDSTGD Sbjct: 61 TMLDEMLAHLAAVSTAVDIPVNADFEGGFAEAPEGVAANVARAVETGVAGLSIEDSTGDK 120 Query: 121 ANPLFEHKLAVERIKAARKAIDADNSGVLLTGRCEAFLWGRKDLNLVIERLQAYSEAGAD 180 +PLF LAVERI+AAR+AIDA+ VLLTGRCEAFLWG+ DL LV +RL AY+EAGAD Sbjct: 121 DHPLFARDLAVERIRAARQAIDANGGDVLLTGRCEAFLWGKPDLGLVTDRLAAYAEAGAD 180 Query: 181 VLYSPGIATKEEISAVVKAVAPKPVNLLIGGASELTLQSVADLGVRRISVGGALARMAWT 240 LY+PGI + EEI+AVVKAVAPKPVNLLI G+S L+L DLGVRRISVGG+LAR+AW Sbjct: 181 CLYAPGIKSVEEITAVVKAVAPKPVNLLI-GSSGLSLMQAEDLGVRRISVGGSLARIAWA 239 Query: 241 GVMKAAKEMAEKGTFTEFANGYPGGEL 267 G M+AAKEMAE+GTFTE ANGYPGGEL Sbjct: 240 GFMRAAKEMAEQGTFTELANGYPGGEL 266 >ref|YP_577433.1| hypothetical protein Nham_2180 [Nitrobacter hamburgensis X14] gb|ABE62973.1| conserved hypothetical protein [Nitrobacter hamburgensis X14] Length = 271 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 190/263 (72%), Positives = 221/263 (84%), Gaps = 1/263 (0%) Query: 5 TADKRAAFKKLHESGCFIIPNPFDVGSARALQHLGFKALASTSAGFAWTIAKADNRVTVD 64 TA+KRAAF LHESGCF+IPNP+D+GSAR LQ +GFKALASTSAGFAW+I KADN +T+D Sbjct: 4 TAEKRAAFHSLHESGCFVIPNPWDIGSARVLQGMGFKALASTSAGFAWSIGKADNHITLD 63 Query: 65 DVCDHLTALCAAVDIPVNADFEGGFAVEPDKVAVNVARAVKTGVAGLSIEDSTGDAANPL 124 +VC HLTALCAAVD+P+NADFE GFA EP+ VAVNV+RA KTGVAGLSIEDSTGD PL Sbjct: 64 EVCSHLTALCAAVDLPINADFENGFANEPEGVAVNVSRAAKTGVAGLSIEDSTGDQDKPL 123 Query: 125 FEHKLAVERIKAARKAIDADNSGVLLTGRCEAFLWGRKDLNLVIERLQAYSEAGADVLYS 184 ++ LA+ERI+AARKAIDAD SG+LL GRCEAFLWG DL L I+RLQAY+EAGAD LY+ Sbjct: 124 YDKTLAIERIRAARKAIDADRSGMLLVGRCEAFLWGMPDLKLTIDRLQAYAEAGADCLYA 183 Query: 185 PGIATKEEISAVVKAVAPKPVNLLIGGASELTLQSVADLGVRRISVGGALARMAWTGVMK 244 PG+ +K++I+A VKAV PKP NLLIG L++ ADLGVRRISVGGALAR AW G ++ Sbjct: 184 PGLKSKDDIAAAVKAVHPKPFNLLIGWPG-LSVAEAADLGVRRISVGGALARAAWGGFLR 242 Query: 245 AAKEMAEKGTFTEFANGYPGGEL 267 AAKE+AEKGTF GYPGGEL Sbjct: 243 AAKEIAEKGTFDGLGAGYPGGEL 265 >ref|YP_001240926.1| putative methylisocitrate lyase or carboxyvinyl-carboxyphosphonate phosphorylmutase [Bradyrhizobium sp. BTAi1] gb|ABQ37020.1| putative methylisocitrate lyase or carboxyvinyl-carboxyphosphonate phosphorylmutase [Bradyrhizobium sp. BTAi1] Length = 271 Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust. Identities = 178/264 (67%), Positives = 220/264 (83%), Gaps = 1/264 (0%) Query: 1 MPLPTADKRAAFKKLHESGCFIIPNPFDVGSARALQHLGFKALASTSAGFAWTIAKADNR 60 M + TADKRAAF++LH++GCF++PNPFD+G+A+ LQ LGF+A+ASTSAGFAW+I K D Sbjct: 1 MAVTTADKRAAFRRLHQAGCFMLPNPFDIGTAKMLQQLGFQAIASTSAGFAWSIGKPDTG 60 Query: 61 VTVDDVCDHLTALCAAVDIPVNADFEGGFAVEPDKVAVNVARAVKTGVAGLSIEDSTGDA 120 V ++++ HLT+L AAVDIPVNADFEGGFA PD VA NV RAV TG+AGLSIEDSTGDA Sbjct: 61 VELEEMLAHLTSLSAAVDIPVNADFEGGFADAPDGVAANVTRAVATGIAGLSIEDSTGDA 120 Query: 121 ANPLFEHKLAVERIKAARKAIDADNSGVLLTGRCEAFLWGRKDLNLVIERLQAYSEAGAD 180 ++PL+E LAVERI+AAR+AIDA + VLLTGRCEA+LWGRKDL LVI+RL AY+EAGAD Sbjct: 121 SHPLYERALAVERIRAARQAIDATGADVLLTGRCEAYLWGRKDLALVIDRLCAYAEAGAD 180 Query: 181 VLYSPGIATKEEISAVVKAVAPKPVNLLIGGASELTLQSVADLGVRRISVGGALARMAWT 240 LY+PGI T E+++ +VKAV PKP+NLL GG + +LQ LGVRRIS+GGALARMAW Sbjct: 181 CLYAPGITTPEDVAEIVKAVGPKPINLLNGGGA-FSLQQAEALGVRRISIGGALARMAWA 239 Query: 241 GVMKAAKEMAEKGTFTEFANGYPG 264 GVM+AAK+MAE+G+F A+ Y G Sbjct: 240 GVMRAAKDMAEQGSFAVLADRYTG 263 >ref|YP_568882.1| hypothetical protein RPD_1745 [Rhodopseudomonas palustris BisB5] gb|ABE38981.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5] Length = 276 Score = 342 bits (877), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 173/267 (64%), Positives = 212/267 (79%), Gaps = 1/267 (0%) Query: 1 MPLPTADKRAAFKKLHESGCFIIPNPFDVGSARALQHLGFKALASTSAGFAWTIAKADNR 60 MP+PTA KRAAF+KLHESGCF++PNP+DVGSAR LQHLGF+ALASTS+G+AW+ +ADN+ Sbjct: 1 MPIPTAAKRAAFRKLHESGCFVLPNPWDVGSARLLQHLGFQALASTSSGYAWSTGRADNQ 60 Query: 61 VTVDDVCDHLTALCAAVDIPVNADFEGGFAVEPDKVAVNVARAVKTGVAGLSIEDSTGDA 120 V DDV HLT L AAVD+P+NADFE GFA +P VA NV RAV TG+AGLSIE+STGDA Sbjct: 61 VACDDVLAHLTMLSAAVDLPINADFEAGFADDPQGVAANVTRAVATGIAGLSIENSTGDA 120 Query: 121 ANPLFEHKLAVERIKAARKAIDADNSGVLLTGRCEAFLWGRKDLNLVIERLQAYSEAGAD 180 PL++ L VERIKAAR AIDA V+L RCE FLWG +DL RL A++EAGAD Sbjct: 121 QRPLYDDALGVERIKAARAAIDATGEDVMLVARCEGFLWGERDLAKTAARLAAFAEAGAD 180 Query: 181 VLYSPGIATKEEISAVVKAVAPKPVNLLIGGASELTLQSVADLGVRRISVGGALARMAWT 240 LY+PG+AT+ EI+ +VKAVAPKP+N+L+ +T+ ++ADLGVRRISVGGALAR AW Sbjct: 181 CLYAPGVATEAEITPLVKAVAPKPLNVLVVQPG-MTVAALADLGVRRISVGGALARSAWA 239 Query: 241 GVMKAAKEMAEKGTFTEFANGYPGGEL 267 G ++AA+E+A+ GTFT FA GGEL Sbjct: 240 GFLEAAREIAQGGTFTAFAKAAKGGEL 266