BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0158.0006.p (219 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_771985.1| transcriptional regulator [Bradyrhizobium japon... 384 e-105 ref|YP_001206296.1| Ars family transcriptional regulator [Bradyr... 373 e-101 ref|YP_001240928.1| ArsR family transcriptional regulator [Brady... 363 8e-99 ref|ZP_08630332.1| transcriptional regulator, ArsR family [Brady... 306 1e-81 ref|YP_004692687.1| HTH-type ArsR family transcriptional regulat... 256 2e-66 >ref|NP_771985.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC50610.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 266 Score = 384 bits (986), Expect = e-105, Method: Compositional matrix adjust. Identities = 185/216 (85%), Positives = 196/216 (90%) Query: 1 LVGDPARCNMLTALMTGRALTASELAQEAGITPQTASSHLSKLEAGGLIEPEKQGRHRYY 60 LVGDPAR NMLTALM GRALTASELAQEAGITPQTASSHLSKLEAGGL+EPEKQGRHRYY Sbjct: 47 LVGDPARANMLTALMNGRALTASELAQEAGITPQTASSHLSKLEAGGLVEPEKQGRHRYY 106 Query: 61 RLSDPDVADVLEGLQGIAARAGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDSMKRQ 120 RL+D DVA VLEGL G+AAR GHMRVRTGPKDPALRRARICYDHLAGDLGVQMLD+M+ + Sbjct: 107 RLTDDDVAGVLEGLAGLAARTGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDTMRER 166 Query: 121 KLVRQSKQAIELTGEGKRFMAEELQIDADALTHPRRPVCKACLDWSERRHHLAGTLGAAM 180 LVRQ KQ IELT EG+RF+A+ LQI D L HPRRPVCKACLDWSERRHHLAGTLGA M Sbjct: 167 NLVRQKKQDIELTAEGERFLAKHLQISPDMLAHPRRPVCKACLDWSERRHHLAGTLGATM 226 Query: 181 MDRFTELKWAARDAAPGSRVVNFSRNGEKRFAALFG 216 M RFTELKWAARDA PGSRVVNF+R GEK+FAALFG Sbjct: 227 MQRFTELKWAARDATPGSRVVNFTRTGEKQFAALFG 262 >ref|YP_001206296.1| Ars family transcriptional regulator [Bradyrhizobium sp. ORS 278] emb|CAL78072.1| putative transcriptional regulatory protein, Ars family [Bradyrhizobium sp. ORS 278] Length = 233 Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust. Identities = 179/218 (82%), Positives = 196/218 (89%) Query: 1 LVGDPARCNMLTALMTGRALTASELAQEAGITPQTASSHLSKLEAGGLIEPEKQGRHRYY 60 LVGDPAR NMLTAL++GRALTA+ELAQEAG+TPQTASSHL+KLE GGLIEPEKQGRHRYY Sbjct: 13 LVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLEGGGLIEPEKQGRHRYY 72 Query: 61 RLSDPDVADVLEGLQGIAARAGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDSMKRQ 120 RL+DPDVADVLE L G+AARAGHMRVRTGPK+P LRRARICYDHLAGDLGVQMLDSM RQ Sbjct: 73 RLADPDVADVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGDLGVQMLDSMTRQ 132 Query: 121 KLVRQSKQAIELTGEGKRFMAEELQIDADALTHPRRPVCKACLDWSERRHHLAGTLGAAM 180 +LVR+ KQ I LT +G++F+A L+I + L HPRRPVCKACLDWS RRHHLAGTLGAA+ Sbjct: 133 RLVRRRKQEIVLTEDGEQFLARHLRISPEMLAHPRRPVCKACLDWSARRHHLAGTLGAAL 192 Query: 181 MDRFTELKWAARDAAPGSRVVNFSRNGEKRFAALFGPD 218 M RFTELKWAARD PGSRVVNFSR GEK FAALFGPD Sbjct: 193 MKRFTELKWAARDTTPGSRVVNFSRAGEKHFAALFGPD 230 >ref|YP_001240928.1| ArsR family transcriptional regulator [Bradyrhizobium sp. BTAi1] gb|ABQ37022.1| transcriptional regulator, ArsR family [Bradyrhizobium sp. BTAi1] Length = 224 Score = 363 bits (933), Expect = 8e-99, Method: Compositional matrix adjust. Identities = 175/217 (80%), Positives = 193/217 (88%) Query: 1 LVGDPARCNMLTALMTGRALTASELAQEAGITPQTASSHLSKLEAGGLIEPEKQGRHRYY 60 LVGDPAR NMLTAL++GRALTA+ELAQEAG+TPQTASSHL+KLE+GGLIEPEKQGRHRYY Sbjct: 5 LVGDPARANMLTALLSGRALTATELAQEAGVTPQTASSHLAKLESGGLIEPEKQGRHRYY 64 Query: 61 RLSDPDVADVLEGLQGIAARAGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDSMKRQ 120 RL+D DVADVLE L G+AARAGHMRVRTGPK+P LRRARICYDHLAGDLGVQML+SM Q Sbjct: 65 RLADLDVADVLEKLAGLAARAGHMRVRTGPKEPELRRARICYDHLAGDLGVQMLESMVSQ 124 Query: 121 KLVRQSKQAIELTGEGKRFMAEELQIDADALTHPRRPVCKACLDWSERRHHLAGTLGAAM 180 KLVR+ KQ I LT +G++F+ L+I + L HPRRPVCKACLDWS RRHHLAGTLGAA+ Sbjct: 125 KLVRRRKQEIVLTEDGEQFLTRHLRISPEMLAHPRRPVCKACLDWSARRHHLAGTLGAAL 184 Query: 181 MDRFTELKWAARDAAPGSRVVNFSRNGEKRFAALFGP 217 M RFTELKWAARD PGSRVVNFSR GEK FAALFGP Sbjct: 185 MKRFTELKWAARDPTPGSRVVNFSRAGEKHFAALFGP 221 >ref|ZP_08630332.1| transcriptional regulator, ArsR family [Bradyrhizobiaceae bacterium SG-6C] gb|EGP06711.1| transcriptional regulator, ArsR family [Bradyrhizobiaceae bacterium SG-6C] Length = 223 Score = 306 bits (784), Expect = 1e-81, Method: Compositional matrix adjust. Identities = 153/216 (70%), Positives = 176/216 (81%), Gaps = 3/216 (1%) Query: 1 LVGDPARCNMLTALMTGRALTASELAQEAGITPQTASSHLSKLEAGGLIEPEKQGRHRYY 60 LVGDPAR NMLTALM+GRALTA+ELAQEAGIT QTASSHL+KL AG L+ PEKQGRHRY+ Sbjct: 7 LVGDPARSNMLTALMSGRALTATELAQEAGITAQTASSHLAKLAAGHLVVPEKQGRHRYF 66 Query: 61 RLSDPDVADVLEGLQGIAARAGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDSMKRQ 120 RLS PDVA VLEGL G+AARAGH+RVRTGP DP LRRAR+CYDHLAGDLGV+MLD+M Sbjct: 67 RLSGPDVAAVLEGLMGLAARAGHLRVRTGPADPGLRRARVCYDHLAGDLGVRMLDAMTGN 126 Query: 121 KLVRQSKQAIELTGEGKRFMAEELQIDADALTHPRRPVCKACLDWSERRHHLAGTLGAAM 180 KL+R+ K ++ LT +G+RF+A +L ID AL RRP+CK CLDWS RR HLAG+LGAAM Sbjct: 127 KLLREQKGSVSLTPQGERFVA-DLGIDLPALGGTRRPLCKTCLDWSVRRSHLAGSLGAAM 185 Query: 181 MDRFTELKWAARDAAPGSRVVNFSRNGEKRFAALFG 216 + RF EL WA R+ G+RVV FS G RF ALFG Sbjct: 186 LSRFYELNWAKRE--KGNRVVTFSPKGTARFNALFG 219 >ref|YP_004692687.1| HTH-type ArsR family transcriptional regulator [Roseobacter litoralis Och 149] gb|AEI95724.1| putative HTH-type transcriptional regulator, ArsR family [Roseobacter litoralis Och 149] Length = 227 Score = 256 bits (654), Expect = 2e-66, Method: Compositional matrix adjust. Identities = 125/215 (58%), Positives = 160/215 (74%), Gaps = 3/215 (1%) Query: 1 LVGDPARCNMLTALMTGRALTASELAQEAGITPQTASSHLSKLEAGGLIEPEKQGRHRYY 60 L+GDPAR NMLTALM+G+ALT SEL++EAG+T QTASSHLSKL+AGGL+ P KQGRH+Y+ Sbjct: 13 LIGDPARANMLTALMSGKALTVSELSEEAGVTIQTASSHLSKLDAGGLLRPRKQGRHKYF 72 Query: 61 RLSDPDVADVLEGLQGIAARAGHMRVRTGPKDPALRRARICYDHLAGDLGVQMLDSMKRQ 120 L++ +VA VLEGL G+AA +GH+R RTGPKD LR+AR+CY+HLAGD+G Q+ DS+ Q Sbjct: 73 SLANDEVAHVLEGLMGLAAGSGHLRKRTGPKDIELRKARVCYNHLAGDMGTQLFDSLMAQ 132 Query: 121 KLVRQSKQAIELTGEGKRFMAEELQIDADALTHPRRPVCKACLDWSERRHHLAGTLGAAM 180 + + + + LT G F A ID D+L R P+C+ CLDWSERR HLAG+LG A Sbjct: 133 GHLAINGEDLILTTTGANF-ATGFHIDLDSLRSNRTPLCRECLDWSERRSHLAGSLGRAF 191 Query: 181 MDRFTELKWAARDAAPGSRVVNFSRNGEKRFAALF 215 + RF +L WA+RD +RVV FSR G + F LF Sbjct: 192 LSRFEDLSWASRDQK--TRVVTFSRIGAQEFERLF 224